data_5JT7
#
_model_server_result.job_id            ZLibACkJDPbCFcPvGwOUQQ 
_model_server_result.datetime_utc      '2024-10-18 15:29:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5jt7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5JT7 
#
_exptl.entry_id    5JT7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.16 
_cell.angle_gamma         90 
_cell.entry_id            5JT7 
_cell.length_a            90.322 
_cell.length_b            64.214 
_cell.length_c            71.238 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JT7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_755 -x+2,y,-z -1 0 0 0 1 0 0 0 -1 180.644 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 318 A CYS 318 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc2 A SG CYS 320 A CYS 320 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc3 A SG CYS 323 A CYS 323 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc4 A ND1 HIS 349 A HIS 349 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 174 n n 
C1 C2 GOL sing 175 n n 
C1 H11 GOL sing 176 n n 
C1 H12 GOL sing 177 n n 
O1 HO1 GOL sing 178 n n 
C2 O2 GOL sing 179 n n 
C2 C3 GOL sing 180 n n 
C2 H2 GOL sing 181 n n 
O2 HO2 GOL sing 182 n n 
C3 O3 GOL sing 183 n n 
C3 H31 GOL sing 184 n n 
C3 H32 GOL sing 185 n n 
O3 HO3 GOL sing 186 n n 
#
_atom_sites.entry_id                     5JT7 
_atom_sites.fract_transf_matrix[1][1]    0.011071 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000611 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015573 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014059 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 401 1 ZN ZN . 
C 3 GOL A 1 402 1 GOL GOL . 
D 3 GOL A 1 403 3 GOL GOL . 
E 4 6N2 A 1 404 1 6N2 C36 . 
F 5 HOH A 1 501 55 HOH HOH . 
F 5 HOH A 2 502 67 HOH HOH . 
F 5 HOH A 3 503 121 HOH HOH . 
F 5 HOH A 4 504 167 HOH HOH . 
F 5 HOH A 5 505 128 HOH HOH . 
F 5 HOH A 6 506 217 HOH HOH . 
F 5 HOH A 7 507 31 HOH HOH . 
F 5 HOH A 8 508 135 HOH HOH . 
F 5 HOH A 9 509 124 HOH HOH . 
F 5 HOH A 10 510 79 HOH HOH . 
F 5 HOH A 11 511 168 HOH HOH . 
F 5 HOH A 12 512 22 HOH HOH . 
F 5 HOH A 13 513 331 HOH HOH . 
F 5 HOH A 14 514 235 HOH HOH . 
F 5 HOH A 15 515 72 HOH HOH . 
F 5 HOH A 16 516 155 HOH HOH . 
F 5 HOH A 17 517 24 HOH HOH . 
F 5 HOH A 18 518 310 HOH HOH . 
F 5 HOH A 19 519 8 HOH HOH . 
F 5 HOH A 20 520 154 HOH HOH . 
F 5 HOH A 21 521 178 HOH HOH . 
F 5 HOH A 22 522 40 HOH HOH . 
F 5 HOH A 23 523 91 HOH HOH . 
F 5 HOH A 24 524 6 HOH HOH . 
F 5 HOH A 25 525 99 HOH HOH . 
F 5 HOH A 26 526 51 HOH HOH . 
F 5 HOH A 27 527 238 HOH HOH . 
F 5 HOH A 28 528 186 HOH HOH . 
F 5 HOH A 29 529 170 HOH HOH . 
F 5 HOH A 30 530 321 HOH HOH . 
F 5 HOH A 31 531 2 HOH HOH . 
F 5 HOH A 32 532 129 HOH HOH . 
F 5 HOH A 33 533 23 HOH HOH . 
F 5 HOH A 34 534 182 HOH HOH . 
F 5 HOH A 35 535 9 HOH HOH . 
F 5 HOH A 36 536 206 HOH HOH . 
F 5 HOH A 37 537 53 HOH HOH . 
F 5 HOH A 38 538 54 HOH HOH . 
F 5 HOH A 39 539 38 HOH HOH . 
F 5 HOH A 40 540 220 HOH HOH . 
F 5 HOH A 41 541 333 HOH HOH . 
F 5 HOH A 42 542 42 HOH HOH . 
F 5 HOH A 43 543 82 HOH HOH . 
F 5 HOH A 44 544 15 HOH HOH . 
F 5 HOH A 45 545 104 HOH HOH . 
F 5 HOH A 46 546 174 HOH HOH . 
F 5 HOH A 47 547 47 HOH HOH . 
F 5 HOH A 48 548 148 HOH HOH . 
F 5 HOH A 49 549 56 HOH HOH . 
F 5 HOH A 50 550 219 HOH HOH . 
F 5 HOH A 51 551 52 HOH HOH . 
F 5 HOH A 52 552 247 HOH HOH . 
F 5 HOH A 53 553 76 HOH HOH . 
F 5 HOH A 54 554 30 HOH HOH . 
F 5 HOH A 55 555 92 HOH HOH . 
F 5 HOH A 56 556 37 HOH HOH . 
F 5 HOH A 57 557 93 HOH HOH . 
F 5 HOH A 58 558 195 HOH HOH . 
F 5 HOH A 59 559 194 HOH HOH . 
F 5 HOH A 60 560 21 HOH HOH . 
F 5 HOH A 61 561 35 HOH HOH . 
F 5 HOH A 62 562 199 HOH HOH . 
F 5 HOH A 63 563 126 HOH HOH . 
F 5 HOH A 64 564 213 HOH HOH . 
F 5 HOH A 65 565 95 HOH HOH . 
F 5 HOH A 66 566 98 HOH HOH . 
F 5 HOH A 67 567 3 HOH HOH . 
F 5 HOH A 68 568 43 HOH HOH . 
F 5 HOH A 69 569 10 HOH HOH . 
F 5 HOH A 70 570 115 HOH HOH . 
F 5 HOH A 71 571 18 HOH HOH . 
F 5 HOH A 72 572 61 HOH HOH . 
F 5 HOH A 73 573 26 HOH HOH . 
F 5 HOH A 74 574 103 HOH HOH . 
F 5 HOH A 75 575 175 HOH HOH . 
F 5 HOH A 76 576 20 HOH HOH . 
F 5 HOH A 77 577 81 HOH HOH . 
F 5 HOH A 78 578 248 HOH HOH . 
F 5 HOH A 79 579 298 HOH HOH . 
F 5 HOH A 80 580 17 HOH HOH . 
F 5 HOH A 81 581 177 HOH HOH . 
F 5 HOH A 82 582 74 HOH HOH . 
F 5 HOH A 83 583 141 HOH HOH . 
F 5 HOH A 84 584 33 HOH HOH . 
F 5 HOH A 85 585 83 HOH HOH . 
F 5 HOH A 86 586 90 HOH HOH . 
F 5 HOH A 87 587 68 HOH HOH . 
F 5 HOH A 88 588 136 HOH HOH . 
F 5 HOH A 89 589 19 HOH HOH . 
F 5 HOH A 90 590 28 HOH HOH . 
F 5 HOH A 91 591 13 HOH HOH . 
F 5 HOH A 92 592 152 HOH HOH . 
F 5 HOH A 93 593 11 HOH HOH . 
F 5 HOH A 94 594 308 HOH HOH . 
F 5 HOH A 95 595 27 HOH HOH . 
F 5 HOH A 96 596 102 HOH HOH . 
F 5 HOH A 97 597 45 HOH HOH . 
F 5 HOH A 98 598 118 HOH HOH . 
F 5 HOH A 99 599 63 HOH HOH . 
F 5 HOH A 100 600 94 HOH HOH . 
F 5 HOH A 101 601 191 HOH HOH . 
F 5 HOH A 102 602 36 HOH HOH . 
F 5 HOH A 103 603 49 HOH HOH . 
F 5 HOH A 104 604 14 HOH HOH . 
F 5 HOH A 105 605 29 HOH HOH . 
F 5 HOH A 106 606 84 HOH HOH . 
F 5 HOH A 107 607 180 HOH HOH . 
F 5 HOH A 108 608 127 HOH HOH . 
F 5 HOH A 109 609 299 HOH HOH . 
F 5 HOH A 110 610 212 HOH HOH . 
F 5 HOH A 111 611 122 HOH HOH . 
F 5 HOH A 112 612 34 HOH HOH . 
F 5 HOH A 113 613 181 HOH HOH . 
F 5 HOH A 114 614 197 HOH HOH . 
F 5 HOH A 115 615 125 HOH HOH . 
F 5 HOH A 116 616 190 HOH HOH . 
F 5 HOH A 117 617 249 HOH HOH . 
F 5 HOH A 118 618 77 HOH HOH . 
F 5 HOH A 119 619 4 HOH HOH . 
F 5 HOH A 120 620 25 HOH HOH . 
F 5 HOH A 121 621 105 HOH HOH . 
F 5 HOH A 122 622 207 HOH HOH . 
F 5 HOH A 123 623 32 HOH HOH . 
F 5 HOH A 124 624 7 HOH HOH . 
F 5 HOH A 125 625 296 HOH HOH . 
F 5 HOH A 126 626 215 HOH HOH . 
F 5 HOH A 127 627 87 HOH HOH . 
F 5 HOH A 128 628 140 HOH HOH . 
F 5 HOH A 129 629 242 HOH HOH . 
F 5 HOH A 130 630 58 HOH HOH . 
F 5 HOH A 131 631 109 HOH HOH . 
F 5 HOH A 132 632 293 HOH HOH . 
F 5 HOH A 133 633 144 HOH HOH . 
F 5 HOH A 134 634 329 HOH HOH . 
F 5 HOH A 135 635 39 HOH HOH . 
F 5 HOH A 136 636 240 HOH HOH . 
F 5 HOH A 137 637 300 HOH HOH . 
F 5 HOH A 138 638 297 HOH HOH . 
F 5 HOH A 139 639 318 HOH HOH . 
F 5 HOH A 140 640 243 HOH HOH . 
F 5 HOH A 141 641 147 HOH HOH . 
F 5 HOH A 142 642 89 HOH HOH . 
F 5 HOH A 143 643 332 HOH HOH . 
F 5 HOH A 144 644 226 HOH HOH . 
F 5 HOH A 145 645 302 HOH HOH . 
F 5 HOH A 146 646 59 HOH HOH . 
F 5 HOH A 147 647 110 HOH HOH . 
F 5 HOH A 148 648 64 HOH HOH . 
F 5 HOH A 149 649 62 HOH HOH . 
F 5 HOH A 150 650 78 HOH HOH . 
F 5 HOH A 151 651 311 HOH HOH . 
F 5 HOH A 152 652 12 HOH HOH . 
F 5 HOH A 153 653 324 HOH HOH . 
F 5 HOH A 154 654 69 HOH HOH . 
F 5 HOH A 155 655 237 HOH HOH . 
F 5 HOH A 156 656 106 HOH HOH . 
F 5 HOH A 157 657 96 HOH HOH . 
F 5 HOH A 158 658 283 HOH HOH . 
F 5 HOH A 159 659 192 HOH HOH . 
F 5 HOH A 160 660 246 HOH HOH . 
F 5 HOH A 161 661 60 HOH HOH . 
F 5 HOH A 162 662 288 HOH HOH . 
F 5 HOH A 163 663 70 HOH HOH . 
F 5 HOH A 164 664 108 HOH HOH . 
F 5 HOH A 165 665 289 HOH HOH . 
F 5 HOH A 166 666 304 HOH HOH . 
F 5 HOH A 167 667 165 HOH HOH . 
F 5 HOH A 168 668 204 HOH HOH . 
F 5 HOH A 169 669 172 HOH HOH . 
F 5 HOH A 170 670 111 HOH HOH . 
F 5 HOH A 171 671 211 HOH HOH . 
F 5 HOH A 172 672 133 HOH HOH . 
F 5 HOH A 173 673 65 HOH HOH . 
F 5 HOH A 174 674 260 HOH HOH . 
F 5 HOH A 175 675 322 HOH HOH . 
F 5 HOH A 176 676 41 HOH HOH . 
F 5 HOH A 177 677 222 HOH HOH . 
F 5 HOH A 178 678 189 HOH HOH . 
F 5 HOH A 179 679 160 HOH HOH . 
F 5 HOH A 180 680 139 HOH HOH . 
F 5 HOH A 181 681 292 HOH HOH . 
F 5 HOH A 182 682 176 HOH HOH . 
F 5 HOH A 183 683 301 HOH HOH . 
F 5 HOH A 184 684 328 HOH HOH . 
F 5 HOH A 185 685 202 HOH HOH . 
F 5 HOH A 186 686 188 HOH HOH . 
F 5 HOH A 187 687 100 HOH HOH . 
F 5 HOH A 188 688 323 HOH HOH . 
F 5 HOH A 189 689 325 HOH HOH . 
F 5 HOH A 190 690 163 HOH HOH . 
F 5 HOH A 191 691 137 HOH HOH . 
F 5 HOH A 192 692 294 HOH HOH . 
F 5 HOH A 193 693 214 HOH HOH . 
F 5 HOH A 194 694 80 HOH HOH . 
F 5 HOH A 195 695 326 HOH HOH . 
F 5 HOH A 196 696 173 HOH HOH . 
F 5 HOH A 197 697 330 HOH HOH . 
F 5 HOH A 198 698 239 HOH HOH . 
F 5 HOH A 199 699 208 HOH HOH . 
F 5 HOH A 200 700 169 HOH HOH . 
F 5 HOH A 201 701 73 HOH HOH . 
F 5 HOH A 202 702 85 HOH HOH . 
F 5 HOH A 203 703 198 HOH HOH . 
F 5 HOH A 204 704 307 HOH HOH . 
F 5 HOH A 205 705 327 HOH HOH . 
F 5 HOH A 206 706 162 HOH HOH . 
F 5 HOH A 207 707 205 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 92.149 -1.794 10.58 1 39.01 ? C1 GOL 402 A 1 
HETATM 2 O O1 GOL . . . C 3 90.916 -1.121 10.466 1 42.02 ? O1 GOL 402 A 1 
HETATM 3 C C2 GOL . . . C 3 92.165 -2.514 11.915 1 40.51 ? C2 GOL 402 A 1 
HETATM 4 O O2 GOL . . . C 3 91.393 -1.798 12.864 1 31.88 ? O2 GOL 402 A 1 
HETATM 5 C C3 GOL . . . C 3 93.61 -2.7 12.375 1 44.06 ? C3 GOL 402 A 1 
HETATM 6 O O3 GOL . . . C 3 93.727 -3.97 12.982 1 45.22 ? O3 GOL 402 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#