data_5JTF # _model_server_result.job_id K7Nskv4d_NYhPlGJWai6WQ _model_server_result.datetime_utc '2024-11-27 02:38:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jtf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5JTF # _exptl.entry_id 5JTF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JTF _cell.length_a 67.017 _cell.length_b 67.017 _cell.length_c 206.74 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JTF _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 321 n n C C2 TRS sing 322 n n C C3 TRS sing 323 n n C N TRS sing 324 n n C1 O1 TRS sing 325 n n C1 H11 TRS sing 326 n n C1 H12 TRS sing 327 n n C2 O2 TRS sing 328 n n C2 H21 TRS sing 329 n n C2 H22 TRS sing 330 n n C3 O3 TRS sing 331 n n C3 H31 TRS sing 332 n n C3 H32 TRS sing 333 n n N HN1 TRS sing 334 n n N HN2 TRS sing 335 n n N HN3 TRS sing 336 n n O1 HO1 TRS sing 337 n n O2 HO2 TRS sing 338 n n O3 HO3 TRS sing 339 n n # _atom_sites.entry_id 5JTF _atom_sites.fract_transf_matrix[1][1] 0.014922 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014922 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004837 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRS B 1 301 1 TRS TRS . D 3 HOH A 1 301 23 HOH HOH . D 3 HOH A 2 302 52 HOH HOH . D 3 HOH A 3 303 62 HOH HOH . D 3 HOH A 4 304 58 HOH HOH . D 3 HOH A 5 305 61 HOH HOH . D 3 HOH A 6 306 48 HOH HOH . D 3 HOH A 7 307 46 HOH HOH . D 3 HOH A 8 308 6 HOH HOH . D 3 HOH A 9 309 30 HOH HOH . D 3 HOH A 10 310 43 HOH HOH . D 3 HOH A 11 311 26 HOH HOH . D 3 HOH A 12 312 49 HOH HOH . D 3 HOH A 13 313 24 HOH HOH . D 3 HOH A 14 314 4 HOH HOH . D 3 HOH A 15 315 14 HOH HOH . D 3 HOH A 16 316 22 HOH HOH . D 3 HOH A 17 317 34 HOH HOH . D 3 HOH A 18 318 2 HOH HOH . D 3 HOH A 19 319 40 HOH HOH . D 3 HOH A 20 320 3 HOH HOH . D 3 HOH A 21 321 41 HOH HOH . D 3 HOH A 22 322 31 HOH HOH . D 3 HOH A 23 323 8 HOH HOH . D 3 HOH A 24 324 4 HOH HOH . D 3 HOH A 25 325 11 HOH HOH . D 3 HOH A 26 326 57 HOH HOH . D 3 HOH A 27 327 30 HOH HOH . D 3 HOH A 28 328 23 HOH HOH . D 3 HOH A 29 329 1 HOH HOH . D 3 HOH A 30 330 33 HOH HOH . D 3 HOH A 31 331 29 HOH HOH . D 3 HOH A 32 332 11 HOH HOH . D 3 HOH A 33 333 21 HOH HOH . E 3 HOH B 1 401 15 HOH HOH . E 3 HOH B 2 402 6 HOH HOH . E 3 HOH B 3 403 44 HOH HOH . E 3 HOH B 4 404 20 HOH HOH . E 3 HOH B 5 405 60 HOH HOH . E 3 HOH B 6 406 50 HOH HOH . E 3 HOH B 7 407 10 HOH HOH . E 3 HOH B 8 408 9 HOH HOH . E 3 HOH B 9 409 21 HOH HOH . E 3 HOH B 10 410 39 HOH HOH . E 3 HOH B 11 411 12 HOH HOH . E 3 HOH B 12 412 17 HOH HOH . E 3 HOH B 13 413 51 HOH HOH . E 3 HOH B 14 414 42 HOH HOH . E 3 HOH B 15 415 45 HOH HOH . E 3 HOH B 16 416 63 HOH HOH . E 3 HOH B 17 417 19 HOH HOH . E 3 HOH B 18 418 18 HOH HOH . E 3 HOH B 19 419 27 HOH HOH . E 3 HOH B 20 420 47 HOH HOH . E 3 HOH B 21 421 59 HOH HOH . E 3 HOH B 22 422 36 HOH HOH . E 3 HOH B 23 423 18 HOH HOH . E 3 HOH B 24 424 10 HOH HOH . E 3 HOH B 25 425 31 HOH HOH . E 3 HOH B 26 426 13 HOH HOH . E 3 HOH B 27 427 35 HOH HOH . E 3 HOH B 28 428 14 HOH HOH . E 3 HOH B 29 429 15 HOH HOH . E 3 HOH B 30 430 53 HOH HOH . E 3 HOH B 31 431 1 HOH HOH . E 3 HOH B 32 432 38 HOH HOH . E 3 HOH B 33 433 7 HOH HOH . E 3 HOH B 34 434 24 HOH HOH . E 3 HOH B 35 435 29 HOH HOH . E 3 HOH B 36 436 9 HOH HOH . E 3 HOH B 37 437 34 HOH HOH . E 3 HOH B 38 438 36 HOH HOH . E 3 HOH B 39 439 55 HOH HOH . E 3 HOH B 40 440 28 HOH HOH . E 3 HOH B 41 441 54 HOH HOH . E 3 HOH B 42 442 56 HOH HOH . E 3 HOH B 43 443 13 HOH HOH . E 3 HOH B 44 444 3 HOH HOH . E 3 HOH B 45 445 27 HOH HOH . E 3 HOH B 46 446 25 HOH HOH . E 3 HOH B 47 447 12 HOH HOH . E 3 HOH B 48 448 16 HOH HOH . E 3 HOH B 49 449 37 HOH HOH . E 3 HOH B 50 450 17 HOH HOH . E 3 HOH B 51 451 5 HOH HOH . E 3 HOH B 52 452 8 HOH HOH . E 3 HOH B 53 453 2 HOH HOH . E 3 HOH B 54 454 33 HOH HOH . E 3 HOH B 55 455 16 HOH HOH . E 3 HOH B 56 456 7 HOH HOH . E 3 HOH B 57 457 25 HOH HOH . E 3 HOH B 58 458 32 HOH HOH . E 3 HOH B 59 459 5 HOH HOH . E 3 HOH B 60 460 19 HOH HOH . E 3 HOH B 61 461 32 HOH HOH . E 3 HOH B 62 462 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 2 -31.446 1.69 20.025 1 37.87 ? C TRS 301 B 1 HETATM 2 C C1 TRS . . . C 2 -30.394 0.874 19.287 1 23.7 ? C1 TRS 301 B 1 HETATM 3 C C2 TRS . . . C 2 -32.708 1.807 19.183 1 14.09 ? C2 TRS 301 B 1 HETATM 4 C C3 TRS . . . C 2 -30.897 3.065 20.397 1 28.28 ? C3 TRS 301 B 1 HETATM 5 N N TRS . . . C 2 -31.798 0.971 21.246 1 56.81 ? N TRS 301 B 1 HETATM 6 O O1 TRS . . . C 2 -30.908 -0.413 19.038 1 26.86 ? O1 TRS 301 B 1 HETATM 7 O O2 TRS . . . C 2 -33.484 2.88 19.667 1 44.08 ? O2 TRS 301 B 1 HETATM 8 O O3 TRS . . . C 2 -29.645 2.913 21.032 1 28.97 ? O3 TRS 301 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #