data_5JTY # _model_server_result.job_id 68HUveozlFuUdxW2_PY9KQ _model_server_result.datetime_utc '2024-11-25 15:59:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jty # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5JTY # _exptl.entry_id 5JTY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 217.221 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description '4-hydroxy-5,7-dimethylquinoline-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JTY _cell.length_a 54.569 _cell.length_b 89.684 _cell.length_c 130.415 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JTY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 44 A CYS 44 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 29 B CYS 32 1_555 B SG CYS 55 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 B SG CYS 36 B CYS 39 1_555 B SG CYS 56 B CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 226 B CYS 229 1_555 B SG CYS 281 B CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C12 H11 N O3' _chem_comp.formula_weight 217.221 _chem_comp.id 2JK _chem_comp.mon_nstd_flag . _chem_comp.name '4-hydroxy-5,7-dimethylquinoline-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C6 2JK sing 1 n n O3 C4 2JK sing 2 n n C6 C5 2JK doub 3 n y C6 C7 2JK sing 4 n y C4 C5 2JK sing 5 n y C4 C3 2JK doub 6 n y C5 C10 2JK sing 7 n y C7 C8 2JK doub 8 n y C3 C1 2JK sing 9 n y C10 C9 2JK doub 10 n y C10 N1 2JK sing 11 n y C8 C9 2JK sing 12 n y C8 CL2 2JK sing 13 n n C1 N1 2JK doub 14 n y C1 C2 2JK sing 15 n n O2 C2 2JK doub 16 n n C2 O1 2JK sing 17 n n O1 H1 2JK sing 18 n n C9 H2 2JK sing 19 n n CL2 H3 2JK sing 20 n n CL2 H4 2JK sing 21 n n CL2 H5 2JK sing 22 n n C7 H6 2JK sing 23 n n CL1 H7 2JK sing 24 n n CL1 H8 2JK sing 25 n n CL1 H9 2JK sing 26 n n O3 H10 2JK sing 27 n n C3 H11 2JK sing 28 n n # _atom_sites.entry_id 5JTY _atom_sites.fract_transf_matrix[1][1] 0.018325 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01115 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007668 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 2JK A 1 501 501 2JK 2JK . D 4 6ND B 1 601 502 6ND MP7 . E 5 GLU B 1 602 501 GLU GLU . F 6 HOH A 1 601 325 HOH HOH . F 6 HOH A 2 602 304 HOH HOH . F 6 HOH A 3 603 333 HOH HOH . F 6 HOH A 4 604 328 HOH HOH . F 6 HOH A 5 605 315 HOH HOH . F 6 HOH A 6 606 312 HOH HOH . F 6 HOH A 7 607 329 HOH HOH . F 6 HOH A 8 608 305 HOH HOH . F 6 HOH A 9 609 309 HOH HOH . F 6 HOH A 10 610 327 HOH HOH . F 6 HOH A 11 611 331 HOH HOH . F 6 HOH A 12 612 326 HOH HOH . F 6 HOH A 13 613 317 HOH HOH . F 6 HOH A 14 614 307 HOH HOH . F 6 HOH A 15 615 322 HOH HOH . F 6 HOH A 16 616 318 HOH HOH . F 6 HOH A 17 617 313 HOH HOH . F 6 HOH A 18 618 320 HOH HOH . F 6 HOH A 19 619 310 HOH HOH . F 6 HOH A 20 620 308 HOH HOH . F 6 HOH A 21 621 302 HOH HOH . F 6 HOH A 22 622 314 HOH HOH . F 6 HOH A 23 623 324 HOH HOH . F 6 HOH A 24 624 323 HOH HOH . F 6 HOH A 25 625 303 HOH HOH . F 6 HOH A 26 626 330 HOH HOH . F 6 HOH A 27 627 306 HOH HOH . F 6 HOH A 28 628 311 HOH HOH . F 6 HOH A 29 629 332 HOH HOH . F 6 HOH A 30 630 321 HOH HOH . F 6 HOH A 31 631 316 HOH HOH . F 6 HOH A 32 632 319 HOH HOH . G 6 HOH B 1 701 343 HOH HOH . G 6 HOH B 2 702 339 HOH HOH . G 6 HOH B 3 703 322 HOH HOH . G 6 HOH B 4 704 332 HOH HOH . G 6 HOH B 5 705 317 HOH HOH . G 6 HOH B 6 706 312 HOH HOH . G 6 HOH B 7 707 323 HOH HOH . G 6 HOH B 8 708 308 HOH HOH . G 6 HOH B 9 709 309 HOH HOH . G 6 HOH B 10 710 349 HOH HOH . G 6 HOH B 11 711 344 HOH HOH . G 6 HOH B 12 712 350 HOH HOH . G 6 HOH B 13 713 340 HOH HOH . G 6 HOH B 14 714 320 HOH HOH . G 6 HOH B 15 715 328 HOH HOH . G 6 HOH B 16 716 324 HOH HOH . G 6 HOH B 17 717 342 HOH HOH . G 6 HOH B 18 718 348 HOH HOH . G 6 HOH B 19 719 326 HOH HOH . G 6 HOH B 20 720 347 HOH HOH . G 6 HOH B 21 721 310 HOH HOH . G 6 HOH B 22 722 337 HOH HOH . G 6 HOH B 23 723 346 HOH HOH . G 6 HOH B 24 724 321 HOH HOH . G 6 HOH B 25 725 333 HOH HOH . G 6 HOH B 26 726 329 HOH HOH . G 6 HOH B 27 727 318 HOH HOH . G 6 HOH B 28 728 341 HOH HOH . G 6 HOH B 29 729 316 HOH HOH . G 6 HOH B 30 730 306 HOH HOH . G 6 HOH B 31 731 338 HOH HOH . G 6 HOH B 32 732 334 HOH HOH . G 6 HOH B 33 733 305 HOH HOH . G 6 HOH B 34 734 335 HOH HOH . G 6 HOH B 35 735 315 HOH HOH . G 6 HOH B 36 736 313 HOH HOH . G 6 HOH B 37 737 345 HOH HOH . G 6 HOH B 38 738 336 HOH HOH . G 6 HOH B 39 739 304 HOH HOH . G 6 HOH B 40 740 307 HOH HOH . G 6 HOH B 41 741 314 HOH HOH . G 6 HOH B 42 742 303 HOH HOH . G 6 HOH B 43 743 325 HOH HOH . G 6 HOH B 44 744 330 HOH HOH . G 6 HOH B 45 745 311 HOH HOH . G 6 HOH B 46 746 319 HOH HOH . G 6 HOH B 47 747 331 HOH HOH . G 6 HOH B 48 748 351 HOH HOH . G 6 HOH B 49 749 327 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2JK . . . C 3 8.771 -5.194 -37.303 1 26.97 ? O1 2JK 501 A 1 HETATM 2 C C2 2JK . . . C 3 9.646 -4.955 -38.178 1 31.73 ? C2 2JK 501 A 1 HETATM 3 O O2 2JK . . . C 3 10.145 -3.801 -38.266 1 33.91 ? O2 2JK 501 A 1 HETATM 4 C C1 2JK . . . C 3 10.104 -6.054 -39.137 1 30.05 ? C1 2JK 501 A 1 HETATM 5 N N1 2JK . . . C 3 9.696 -7.22 -38.586 1 29.95 ? N1 2JK 501 A 1 HETATM 6 C C10 2JK . . . C 3 9.961 -8.412 -39.218 1 32.61 ? C10 2JK 501 A 1 HETATM 7 C C9 2JK . . . C 3 9.529 -9.621 -38.636 1 35.25 ? C9 2JK 501 A 1 HETATM 8 C C8 2JK . . . C 3 9.791 -10.832 -39.26 1 30.22 ? C8 2JK 501 A 1 HETATM 9 C CL2 2JK . . . C 3 9.311 -12.121 -38.601 1 22.66 ? CL2 2JK 501 A 1 HETATM 10 C C7 2JK . . . C 3 10.475 -10.849 -40.465 1 32.11 ? C7 2JK 501 A 1 HETATM 11 C C6 2JK . . . C 3 10.9 -9.664 -41.043 1 31.04 ? C6 2JK 501 A 1 HETATM 12 C CL1 2JK . . . C 3 11.604 -10.063 -42.337 1 28.81 ? CL1 2JK 501 A 1 HETATM 13 C C5 2JK . . . C 3 10.641 -8.427 -40.414 1 33.51 ? C5 2JK 501 A 1 HETATM 14 C C4 2JK . . . C 3 11.057 -7.235 -40.976 1 40.01 ? C4 2JK 501 A 1 HETATM 15 O O3 2JK . . . C 3 11.754 -6.965 -42.162 1 45.88 ? O3 2JK 501 A 1 HETATM 16 C C3 2JK . . . C 3 10.791 -6.061 -40.346 1 32.95 ? C3 2JK 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #