data_5JVO # _model_server_result.job_id eUaXxAUpUwXkxLkKWTE_YA _model_server_result.datetime_utc '2024-10-28 02:28:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jvo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 5JVO # _exptl.entry_id 5JVO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 181.189 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TYROSINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JVO _cell.length_a 83.191 _cell.length_b 83.191 _cell.length_c 83.191 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JVO _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_456 z-1/2,-x+1/2,-y+1 0 0 1 -1 0 0 0 -1 0 -41.5955 41.5955 83.191 3 'crystal symmetry operation' 12_565 -y+1/2,-z+1,x+1/2 0 -1 0 0 0 -1 1 0 0 41.5955 83.191 41.5955 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C9 H11 N O3' _chem_comp.formula_weight 181.189 _chem_comp.id TYR _chem_comp.mon_nstd_flag y _chem_comp.name TYROSINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TYR sing 297 n n N H TYR sing 298 n n N H2 TYR sing 299 n n CA C TYR sing 300 n n CA CB TYR sing 301 n n CA HA TYR sing 302 n n C O TYR doub 303 n n C OXT TYR sing 304 n n CB CG TYR sing 305 n n CB HB2 TYR sing 306 n n CB HB3 TYR sing 307 n n CG CD1 TYR doub 308 n y CG CD2 TYR sing 309 n y CD1 CE1 TYR sing 310 n y CD1 HD1 TYR sing 311 n n CD2 CE2 TYR doub 312 n y CD2 HD2 TYR sing 313 n n CE1 CZ TYR doub 314 n y CE1 HE1 TYR sing 315 n n CE2 CZ TYR sing 316 n y CE2 HE2 TYR sing 317 n n CZ OH TYR sing 318 n n OH HH TYR sing 319 n n OXT HXT TYR sing 320 n n # _atom_sites.entry_id 5JVO _atom_sites.fract_transf_matrix[1][1] 0.012021 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012021 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012021 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TYR A 1 201 1 TYR TYR . D 3 SO4 A 1 202 1 SO4 SO4 . E 2 TYR B 1 201 2 TYR TYR . F 4 HOH A 1 301 26 HOH HOH . F 4 HOH A 2 302 5 HOH HOH . F 4 HOH A 3 303 40 HOH HOH . F 4 HOH A 4 304 64 HOH HOH . F 4 HOH A 5 305 58 HOH HOH . F 4 HOH A 6 306 44 HOH HOH . F 4 HOH A 7 307 23 HOH HOH . F 4 HOH A 8 308 2 HOH HOH . F 4 HOH A 9 309 46 HOH HOH . F 4 HOH A 10 310 14 HOH HOH . F 4 HOH A 11 311 19 HOH HOH . F 4 HOH A 12 312 74 HOH HOH . F 4 HOH A 13 313 8 HOH HOH . F 4 HOH A 14 314 9 HOH HOH . F 4 HOH A 15 315 52 HOH HOH . F 4 HOH A 16 316 78 HOH HOH . F 4 HOH A 17 317 75 HOH HOH . F 4 HOH A 18 318 18 HOH HOH . F 4 HOH A 19 319 15 HOH HOH . F 4 HOH A 20 320 13 HOH HOH . F 4 HOH A 21 321 77 HOH HOH . F 4 HOH A 22 322 56 HOH HOH . F 4 HOH A 23 323 76 HOH HOH . F 4 HOH A 24 324 63 HOH HOH . F 4 HOH A 25 325 17 HOH HOH . F 4 HOH A 26 326 55 HOH HOH . G 4 HOH B 1 301 10 HOH HOH . G 4 HOH B 2 302 6 HOH HOH . G 4 HOH B 3 303 7 HOH HOH . G 4 HOH B 4 304 71 HOH HOH . G 4 HOH B 5 305 4 HOH HOH . G 4 HOH B 6 306 27 HOH HOH . G 4 HOH B 7 307 30 HOH HOH . G 4 HOH B 8 308 11 HOH HOH . G 4 HOH B 9 309 3 HOH HOH . G 4 HOH B 10 310 1 HOH HOH . G 4 HOH B 11 311 79 HOH HOH . G 4 HOH B 12 312 36 HOH HOH . G 4 HOH B 13 313 24 HOH HOH . G 4 HOH B 14 314 21 HOH HOH . G 4 HOH B 15 315 37 HOH HOH . G 4 HOH B 16 316 70 HOH HOH . G 4 HOH B 17 317 69 HOH HOH . G 4 HOH B 18 318 68 HOH HOH . G 4 HOH B 19 319 43 HOH HOH . G 4 HOH B 20 320 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TYR . . . E 2 21.335 14.421 75.435 1 24.79 ? N TYR 201 B 1 HETATM 2 C CA TYR . . . E 2 22.808 14.764 75.249 1 24.11 ? CA TYR 201 B 1 HETATM 3 C C TYR . . . E 2 23.601 13.69 74.577 1 22.76 ? C TYR 201 B 1 HETATM 4 O O TYR . . . E 2 24.731 13.917 74.086 1 22.91 ? O TYR 201 B 1 HETATM 5 C CB TYR . . . E 2 23.431 15.087 76.592 1 26.53 ? CB TYR 201 B 1 HETATM 6 C CG TYR . . . E 2 23.788 13.988 77.526 1 26.65 ? CG TYR 201 B 1 HETATM 7 C CD1 TYR . . . E 2 22.817 13.324 78.254 1 30.37 ? CD1 TYR 201 B 1 HETATM 8 C CD2 TYR . . . E 2 25.177 13.65 77.763 1 26.88 ? CD2 TYR 201 B 1 HETATM 9 C CE1 TYR . . . E 2 23.163 12.362 79.203 1 31.77 ? CE1 TYR 201 B 1 HETATM 10 C CE2 TYR . . . E 2 25.534 12.715 78.737 1 25.32 ? CE2 TYR 201 B 1 HETATM 11 C CZ TYR . . . E 2 24.528 12.046 79.429 1 31.3 ? CZ TYR 201 B 1 HETATM 12 O OH TYR . . . E 2 24.813 11.069 80.354 1 31.79 ? OH TYR 201 B 1 HETATM 13 O OXT TYR . . . E 2 23.09 12.566 74.538 1 20.94 ? OXT TYR 201 B 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #