data_5JWB
#
_model_server_result.job_id            ZZSJO1dykJH1GJCzJhNuow 
_model_server_result.datetime_utc      '2024-11-17 11:00:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5jwb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":611}' 
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_entry.id    5JWB 
#
_exptl.entry_id    5JWB 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              59.044 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETATE ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5JWB 
_cell.length_a            191.53 
_cell.length_b            191.53 
_cell.length_c            91.258 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5JWB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 41' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 L N N 
? 6 M N N 
? 6 N N N 
? 6 O N N 
? 6 Z N N 
? 6 AA N N 
? 6 BA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ALA 135 A ALA 147 1_555 E MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? 
metalc ? metalc2 A O ILE 340 A ILE 352 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? 
metalc ? metalc3 C O2P FAD . A FAD 601 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? 
metalc ? metalc4 C O1P FAD . A FAD 601 1_555 E MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? 
metalc ? metalc5 C O2A FAD . A FAD 601 1_555 F MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.874 ? 
metalc ? metalc6 C O1A FAD . A FAD 601 1_555 G MG MG . A MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? 
metalc ? metalc7 B O ALA 135 H ALA 147 1_555 T MG MG . H MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? 
metalc ? metalc8 B O ILE 340 H ILE 352 1_555 S MG MG . H MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? 
metalc ? metalc9 R O2P FAD . H FAD 602 1_555 S MG MG . H MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? 
metalc ? metalc10 R O1P FAD . H FAD 602 1_555 T MG MG . H MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
metalc ? metalc11 R O2A FAD . H FAD 602 1_555 U MG MG . H MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? 
metalc ? metalc12 R O1A FAD . H FAD 602 1_555 V MG MG . H MG 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? 
#
_chem_comp.formula           'C2 H3 O2 -1' 
_chem_comp.formula_weight    59.044 
_chem_comp.id                ACT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACT doub 1 n n 
C OXT ACT sing 2 n n 
C CH3 ACT sing 3 n n 
CH3 H1 ACT sing 4 n n 
CH3 H2 ACT sing 5 n n 
CH3 H3 ACT sing 6 n n 
#
_atom_sites.entry_id                     5JWB 
_atom_sites.fract_transf_matrix[1][1]    0.005221 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005221 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010958 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 601 601 FAD FAD . 
D 3 MG A 1 602 602 MG MG . 
E 3 MG A 1 603 603 MG MG . 
F 3 MG A 1 604 604 MG MG . 
G 3 MG A 1 605 605 MG MG . 
H 4 TRT A 1 606 606 TRT TRT . 
I 4 TRT A 1 607 607 TRT TRT . 
J 5 NAD A 1 608 608 NAD NAD . 
K 4 TRT A 1 609 609 TRT TRT . 
L 6 ACT A 1 610 610 ACT ACT . 
M 6 ACT A 1 611 611 ACT ACT . 
N 6 ACT A 1 612 612 ACT ACT . 
O 6 ACT A 1 613 613 ACT ACT . 
P 7 CXS A 1 614 614 CXS CXS . 
Q 4 TRT H 1 601 601 TRT TRT . 
R 2 FAD H 1 602 602 FAD FAD . 
S 3 MG H 1 603 603 MG MG . 
T 3 MG H 1 604 604 MG MG . 
U 3 MG H 1 605 605 MG MG . 
V 3 MG H 1 606 606 MG MG . 
W 5 NAD H 1 607 607 NAD NAD . 
X 4 TRT H 1 608 608 TRT TRT . 
Y 4 TRT H 1 609 609 TRT TRT . 
Z 6 ACT H 1 610 610 ACT ACT . 
AA 6 ACT H 1 611 611 ACT ACT . 
BA 6 ACT H 1 612 612 ACT ACT . 
CA 7 CXS H 1 613 613 CXS CXS . 
DA 8 HOH A 1 701 701 HOH HOH . 
DA 8 HOH A 2 702 702 HOH HOH . 
DA 8 HOH A 3 703 703 HOH HOH . 
DA 8 HOH A 4 704 704 HOH HOH . 
DA 8 HOH A 5 705 705 HOH HOH . 
DA 8 HOH A 6 706 706 HOH HOH . 
DA 8 HOH A 7 707 707 HOH HOH . 
DA 8 HOH A 8 708 708 HOH HOH . 
DA 8 HOH A 9 709 709 HOH HOH . 
DA 8 HOH A 10 710 710 HOH HOH . 
DA 8 HOH A 11 711 711 HOH HOH . 
DA 8 HOH A 12 712 712 HOH HOH . 
DA 8 HOH A 13 713 713 HOH HOH . 
DA 8 HOH A 14 714 714 HOH HOH . 
EA 8 HOH H 1 701 701 HOH HOH . 
EA 8 HOH H 2 702 702 HOH HOH . 
EA 8 HOH H 3 703 703 HOH HOH . 
EA 8 HOH H 4 704 704 HOH HOH . 
EA 8 HOH H 5 705 705 HOH HOH . 
EA 8 HOH H 6 706 706 HOH HOH . 
EA 8 HOH H 7 707 707 HOH HOH . 
EA 8 HOH H 8 708 708 HOH HOH . 
EA 8 HOH H 9 709 709 HOH HOH . 
EA 8 HOH H 10 710 710 HOH HOH . 
EA 8 HOH H 11 711 711 HOH HOH . 
EA 8 HOH H 12 712 712 HOH HOH . 
EA 8 HOH H 13 713 713 HOH HOH . 
EA 8 HOH H 14 714 714 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACT . . . M 6 60.241 -1.224 28.702 1 70.29 ? C ACT 611 A 1 
HETATM 2 O O ACT . . . M 6 59.989 -2.129 27.868 1 56.2 ? O ACT 611 A 1 
HETATM 3 O OXT ACT . . . M 6 61.468 -1.019 28.892 1 66.29 ? OXT ACT 611 A 1 
HETATM 4 C CH3 ACT . . . M 6 59.157 -0.445 29.422 1 65.91 ? CH3 ACT 611 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           369 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           4 
#