data_5JY4
#
_model_server_result.job_id            YguOdwmZ5Zy_GEcA8DSCzg 
_model_server_result.datetime_utc      '2024-11-26 02:36:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5jy4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    5JY4 
#
_exptl.entry_id    5JY4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5JY4 
_cell.length_a            80.907 
_cell.length_b            80.907 
_cell.length_c            265.231 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JY4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 34 A GLY 34 1_555 A N CSO 35 A CSO 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale2 A C CSO 35 A CSO 35 1_555 A N PHE 36 A PHE 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
metalc ? metalc1 A OE2 GLU 241 A GLU 241 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc2 A OE2 GLU 376 A GLU 376 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc3 C MG MG . A MG 401 1_555 D O1 ISC . A ISC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc4 C MG MG . A MG 401 1_555 D O2 ISC . A ISC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc5 C MG MG . A MG 401 1_555 G O HOH . A HOH 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc6 C MG MG . A MG 401 1_555 G O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc7 B OE1 GLU 241 B GLU 241 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? 
metalc ? metalc8 B OE2 GLU 241 B GLU 241 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? 
metalc ? metalc9 B OE2 GLU 376 B GLU 376 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc10 E MG MG . B MG 401 1_555 F O1 ISC . B ISC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc11 E MG MG . B MG 401 1_555 F O2 ISC . B ISC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc12 E MG MG . B MG 401 1_555 H O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.878 ? 
metalc ? metalc13 E MG MG . B MG 401 1_555 H O HOH . B HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5JY4 
_atom_sites.fract_transf_matrix[1][1]    0.01236 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01236 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00377 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG A 1 401 1 MG MG . 
D 4 ISC A 1 402 2 ISC ISC . 
E 3 MG B 1 401 2 MG MG . 
F 4 ISC B 1 402 3 ISC ISC . 
G 5 HOH A 1 501 45 HOH HOH . 
G 5 HOH A 2 502 70 HOH HOH . 
G 5 HOH A 3 503 127 HOH HOH . 
G 5 HOH A 4 504 38 HOH HOH . 
G 5 HOH A 5 505 25 HOH HOH . 
G 5 HOH A 6 506 8 HOH HOH . 
G 5 HOH A 7 507 11 HOH HOH . 
G 5 HOH A 8 508 47 HOH HOH . 
G 5 HOH A 9 509 10 HOH HOH . 
G 5 HOH A 10 510 37 HOH HOH . 
G 5 HOH A 11 511 65 HOH HOH . 
G 5 HOH A 12 512 51 HOH HOH . 
G 5 HOH A 13 513 57 HOH HOH . 
G 5 HOH A 14 514 71 HOH HOH . 
G 5 HOH A 15 515 5 HOH HOH . 
G 5 HOH A 16 516 4 HOH HOH . 
G 5 HOH A 17 517 21 HOH HOH . 
G 5 HOH A 18 518 13 HOH HOH . 
G 5 HOH A 19 519 41 HOH HOH . 
G 5 HOH A 20 520 14 HOH HOH . 
G 5 HOH A 21 521 12 HOH HOH . 
G 5 HOH A 22 522 1 HOH HOH . 
G 5 HOH A 23 523 27 HOH HOH . 
G 5 HOH A 24 524 84 HOH HOH . 
G 5 HOH A 25 525 63 HOH HOH . 
G 5 HOH A 26 526 68 HOH HOH . 
G 5 HOH A 27 527 20 HOH HOH . 
G 5 HOH A 28 528 64 HOH HOH . 
G 5 HOH A 29 529 76 HOH HOH . 
G 5 HOH A 30 530 17 HOH HOH . 
G 5 HOH A 31 531 66 HOH HOH . 
G 5 HOH A 32 532 73 HOH HOH . 
G 5 HOH A 33 533 9 HOH HOH . 
G 5 HOH A 34 534 35 HOH HOH . 
G 5 HOH A 35 535 43 HOH HOH . 
G 5 HOH A 36 536 53 HOH HOH . 
G 5 HOH A 37 537 33 HOH HOH . 
G 5 HOH A 38 538 55 HOH HOH . 
G 5 HOH A 39 539 129 HOH HOH . 
G 5 HOH A 40 540 74 HOH HOH . 
G 5 HOH A 41 541 36 HOH HOH . 
G 5 HOH A 42 542 28 HOH HOH . 
G 5 HOH A 43 543 61 HOH HOH . 
G 5 HOH A 44 544 54 HOH HOH . 
G 5 HOH A 45 545 50 HOH HOH . 
G 5 HOH A 46 546 58 HOH HOH . 
G 5 HOH A 47 547 52 HOH HOH . 
G 5 HOH A 48 548 44 HOH HOH . 
G 5 HOH A 49 549 122 HOH HOH . 
G 5 HOH A 50 550 22 HOH HOH . 
G 5 HOH A 51 551 88 HOH HOH . 
G 5 HOH A 52 552 120 HOH HOH . 
G 5 HOH A 53 553 56 HOH HOH . 
G 5 HOH A 54 554 19 HOH HOH . 
G 5 HOH A 55 555 90 HOH HOH . 
G 5 HOH A 56 556 134 HOH HOH . 
G 5 HOH A 57 557 30 HOH HOH . 
G 5 HOH A 58 558 77 HOH HOH . 
G 5 HOH A 59 559 75 HOH HOH . 
G 5 HOH A 60 560 104 HOH HOH . 
G 5 HOH A 61 561 86 HOH HOH . 
G 5 HOH A 62 562 139 HOH HOH . 
G 5 HOH A 63 563 82 HOH HOH . 
G 5 HOH A 64 564 111 HOH HOH . 
G 5 HOH A 65 565 118 HOH HOH . 
G 5 HOH A 66 566 137 HOH HOH . 
G 5 HOH A 67 567 121 HOH HOH . 
G 5 HOH A 68 568 123 HOH HOH . 
G 5 HOH A 69 569 83 HOH HOH . 
G 5 HOH A 70 570 100 HOH HOH . 
G 5 HOH A 71 571 119 HOH HOH . 
G 5 HOH A 72 572 130 HOH HOH . 
G 5 HOH A 73 573 132 HOH HOH . 
G 5 HOH A 74 574 135 HOH HOH . 
G 5 HOH A 75 575 141 HOH HOH . 
G 5 HOH A 76 576 78 HOH HOH . 
G 5 HOH A 77 577 125 HOH HOH . 
G 5 HOH A 78 578 110 HOH HOH . 
G 5 HOH A 79 579 128 HOH HOH . 
G 5 HOH A 80 580 40 HOH HOH . 
G 5 HOH A 81 581 106 HOH HOH . 
G 5 HOH A 82 582 80 HOH HOH . 
G 5 HOH A 83 583 79 HOH HOH . 
G 5 HOH A 84 584 138 HOH HOH . 
G 5 HOH A 85 585 105 HOH HOH . 
G 5 HOH A 86 586 109 HOH HOH . 
H 5 HOH B 1 501 6 HOH HOH . 
H 5 HOH B 2 502 3 HOH HOH . 
H 5 HOH B 3 503 24 HOH HOH . 
H 5 HOH B 4 504 89 HOH HOH . 
H 5 HOH B 5 505 42 HOH HOH . 
H 5 HOH B 6 506 69 HOH HOH . 
H 5 HOH B 7 507 2 HOH HOH . 
H 5 HOH B 8 508 114 HOH HOH . 
H 5 HOH B 9 509 29 HOH HOH . 
H 5 HOH B 10 510 72 HOH HOH . 
H 5 HOH B 11 511 39 HOH HOH . 
H 5 HOH B 12 512 7 HOH HOH . 
H 5 HOH B 13 513 15 HOH HOH . 
H 5 HOH B 14 514 26 HOH HOH . 
H 5 HOH B 15 515 49 HOH HOH . 
H 5 HOH B 16 516 16 HOH HOH . 
H 5 HOH B 17 517 85 HOH HOH . 
H 5 HOH B 18 518 23 HOH HOH . 
H 5 HOH B 19 519 31 HOH HOH . 
H 5 HOH B 20 520 60 HOH HOH . 
H 5 HOH B 21 521 62 HOH HOH . 
H 5 HOH B 22 522 48 HOH HOH . 
H 5 HOH B 23 523 32 HOH HOH . 
H 5 HOH B 24 524 59 HOH HOH . 
H 5 HOH B 25 525 108 HOH HOH . 
H 5 HOH B 26 526 34 HOH HOH . 
H 5 HOH B 27 527 93 HOH HOH . 
H 5 HOH B 28 528 87 HOH HOH . 
H 5 HOH B 29 529 91 HOH HOH . 
H 5 HOH B 30 530 18 HOH HOH . 
H 5 HOH B 31 531 97 HOH HOH . 
H 5 HOH B 32 532 81 HOH HOH . 
H 5 HOH B 33 533 94 HOH HOH . 
H 5 HOH B 34 534 131 HOH HOH . 
H 5 HOH B 35 535 117 HOH HOH . 
H 5 HOH B 36 536 133 HOH HOH . 
H 5 HOH B 37 537 101 HOH HOH . 
H 5 HOH B 38 538 112 HOH HOH . 
H 5 HOH B 39 539 126 HOH HOH . 
H 5 HOH B 40 540 99 HOH HOH . 
H 5 HOH B 41 541 103 HOH HOH . 
H 5 HOH B 42 542 95 HOH HOH . 
H 5 HOH B 43 543 107 HOH HOH . 
H 5 HOH B 44 544 102 HOH HOH . 
H 5 HOH B 45 545 98 HOH HOH . 
H 5 HOH B 46 546 67 HOH HOH . 
H 5 HOH B 47 547 140 HOH HOH . 
H 5 HOH B 48 548 124 HOH HOH . 
H 5 HOH B 49 549 115 HOH HOH . 
H 5 HOH B 50 550 136 HOH HOH . 
H 5 HOH B 51 551 116 HOH HOH . 
H 5 HOH B 52 552 96 HOH HOH . 
H 5 HOH B 53 553 46 HOH HOH . 
H 5 HOH B 54 554 113 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -16.311 
_atom_site.Cartn_y               -49.229 
_atom_site.Cartn_z               5.563 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.03 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           1 
#