data_5JYQ # _model_server_result.job_id 2Dc4Ph24oWD5dW6pI9-imA _model_server_result.datetime_utc '2025-01-25 12:41:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jyq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 5JYQ # _exptl.entry_id 5JYQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JYQ _cell.length_a 74.91 _cell.length_b 74.91 _cell.length_c 74.91 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JYQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 207 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA hexadecameric 16 software_defined_assembly 2 PISA octameric 8 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2,3,4,5,6,7,8 A,B,C,D,E 3 1,4,5,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 74.91 0 3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 74.91 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 74.91 74.91 5 'crystal symmetry operation' 17_556 x,z,-y+1 1 0 0 0 0 1 0 -1 0 0 0 74.91 6 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 7 'crystal symmetry operation' 19_566 -x,-z+1,-y+1 -1 0 0 0 0 -1 0 -1 0 0 74.91 74.91 8 'crystal symmetry operation' 20_565 x,-z+1,y 1 0 0 0 0 -1 0 1 0 0 74.91 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 9 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? disulf ? disulf3 A SG CY3 20 A CY3 20 1_555 B SG CYS 21 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? covale ? covale1 A C VAL 3 A VAL 3 1_555 A N CGU 4 A CGU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 A C CGU 4 A CGU 4 1_555 A N HIS 5 A HIS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C TYR 19 A TYR 19 1_555 A N CY3 20 A CY3 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 B C THR 4 B THR 2 1_555 B N HYP 5 B HYP 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale5 B C HYP 5 B HYP 3 1_555 B N LYS 6 B LYS 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 B C SER 11 B SER 9 1_555 B N CGU 12 B CGU 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 B C CGU 12 B CGU 10 1_555 B N ILE 13 B ILE 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 324 n n S O2 SO4 doub 325 n n S O3 SO4 sing 326 n n S O4 SO4 sing 327 n n # _atom_sites.entry_id 5JYQ _atom_sites.fract_transf_matrix[1][1] 0.013349 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013349 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013349 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 101 1 SO4 SO4 . D 4 HOH A 1 201 1 HOH HOH . D 4 HOH A 2 202 20 HOH HOH . D 4 HOH A 3 203 11 HOH HOH . D 4 HOH A 4 204 8 HOH HOH . D 4 HOH A 5 205 35 HOH HOH . D 4 HOH A 6 206 7 HOH HOH . D 4 HOH A 7 207 14 HOH HOH . D 4 HOH A 8 208 2 HOH HOH . D 4 HOH A 9 209 5 HOH HOH . D 4 HOH A 10 210 34 HOH HOH . D 4 HOH A 11 211 16 HOH HOH . D 4 HOH A 12 212 25 HOH HOH . D 4 HOH A 13 213 13 HOH HOH . D 4 HOH A 14 214 9 HOH HOH . D 4 HOH A 15 215 19 HOH HOH . D 4 HOH A 16 216 30 HOH HOH . D 4 HOH A 17 217 12 HOH HOH . D 4 HOH A 18 218 28 HOH HOH . D 4 HOH A 19 219 27 HOH HOH . D 4 HOH A 20 220 33 HOH HOH . D 4 HOH A 21 221 29 HOH HOH . E 4 HOH B 1 101 3 HOH HOH . E 4 HOH B 2 102 10 HOH HOH . E 4 HOH B 3 103 6 HOH HOH . E 4 HOH B 4 104 18 HOH HOH . E 4 HOH B 5 105 24 HOH HOH . E 4 HOH B 6 106 15 HOH HOH . E 4 HOH B 7 107 4 HOH HOH . E 4 HOH B 8 108 17 HOH HOH . E 4 HOH B 9 109 22 HOH HOH . E 4 HOH B 10 110 26 HOH HOH . E 4 HOH B 11 111 31 HOH HOH . E 4 HOH B 12 112 21 HOH HOH . E 4 HOH B 13 113 23 HOH HOH . E 4 HOH B 14 114 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 14.351 37.712 37.667 0.25 25.35 ? S SO4 101 A 1 HETATM 2 O O1 SO4 . . . C 3 13.195 37.273 36.886 0.25 24.93 ? O1 SO4 101 A 1 HETATM 3 O O2 SO4 . . . C 3 14.878 38.965 37.132 0.25 24.4 ? O2 SO4 101 A 1 HETATM 4 O O3 SO4 . . . C 3 13.893 37.912 39.044 0.25 26.58 ? O3 SO4 101 A 1 HETATM 5 O O4 SO4 . . . C 3 15.427 36.73 37.628 0.25 25.8 ? O4 SO4 101 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 550 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #