data_5JZA
#
_model_server_result.job_id            po11hcFG5F3ROuYyLamcBQ 
_model_server_result.datetime_utc      '2024-11-18 06:02:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5jza 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":802}' 
#
_entry.id    5JZA 
#
_exptl.entry_id    5JZA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5JZA 
_cell.length_a            48.73 
_cell.length_b            70.24 
_cell.length_c            170.42 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JZA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 312 A CYS 641 1_555 A SG CYS 319 A CYS 648 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A NE2 HIS 350 A HIS 679 1_555 B MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc2 A NE2 HIS 396 A HIS 725 1_555 B MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc3 B MN MN . A MN 801 1_555 G O1 OGA . A OGA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc4 B MN MN . A MN 801 1_555 G O2' OGA . A OGA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? 
metalc ? metalc5 B MN MN . A MN 801 1_555 H O HOH . A HOH 939 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc6 B MN MN . A MN 801 1_555 H O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5JZA 
_atom_sites.fract_transf_matrix[1][1]    0.020521 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014237 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005868 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MN A 1 801 1 MN MN . 
C 3 GOL A 1 802 2 GOL GOL . 
D 3 GOL A 1 803 3 GOL GOL . 
E 3 GOL A 1 804 4 GOL GOL . 
F 3 GOL A 1 805 5 GOL GOL . 
G 4 OGA A 1 806 1 OGA OGA . 
H 5 HOH A 1 901 12 HOH HOH . 
H 5 HOH A 2 902 54 HOH HOH . 
H 5 HOH A 3 903 121 HOH HOH . 
H 5 HOH A 4 904 30 HOH HOH . 
H 5 HOH A 5 905 34 HOH HOH . 
H 5 HOH A 6 906 117 HOH HOH . 
H 5 HOH A 7 907 8 HOH HOH . 
H 5 HOH A 8 908 80 HOH HOH . 
H 5 HOH A 9 909 6 HOH HOH . 
H 5 HOH A 10 910 26 HOH HOH . 
H 5 HOH A 11 911 3 HOH HOH . 
H 5 HOH A 12 912 42 HOH HOH . 
H 5 HOH A 13 913 5 HOH HOH . 
H 5 HOH A 14 914 226 HOH HOH . 
H 5 HOH A 15 915 122 HOH HOH . 
H 5 HOH A 16 916 68 HOH HOH . 
H 5 HOH A 17 917 45 HOH HOH . 
H 5 HOH A 18 918 118 HOH HOH . 
H 5 HOH A 19 919 16 HOH HOH . 
H 5 HOH A 20 920 110 HOH HOH . 
H 5 HOH A 21 921 11 HOH HOH . 
H 5 HOH A 22 922 33 HOH HOH . 
H 5 HOH A 23 923 25 HOH HOH . 
H 5 HOH A 24 924 31 HOH HOH . 
H 5 HOH A 25 925 47 HOH HOH . 
H 5 HOH A 26 926 13 HOH HOH . 
H 5 HOH A 27 927 223 HOH HOH . 
H 5 HOH A 28 928 136 HOH HOH . 
H 5 HOH A 29 929 115 HOH HOH . 
H 5 HOH A 30 930 86 HOH HOH . 
H 5 HOH A 31 931 70 HOH HOH . 
H 5 HOH A 32 932 27 HOH HOH . 
H 5 HOH A 33 933 159 HOH HOH . 
H 5 HOH A 34 934 50 HOH HOH . 
H 5 HOH A 35 935 79 HOH HOH . 
H 5 HOH A 36 936 72 HOH HOH . 
H 5 HOH A 37 937 219 HOH HOH . 
H 5 HOH A 38 938 247 HOH HOH . 
H 5 HOH A 39 939 2 HOH HOH . 
H 5 HOH A 40 940 75 HOH HOH . 
H 5 HOH A 41 941 49 HOH HOH . 
H 5 HOH A 42 942 174 HOH HOH . 
H 5 HOH A 43 943 142 HOH HOH . 
H 5 HOH A 44 944 62 HOH HOH . 
H 5 HOH A 45 945 182 HOH HOH . 
H 5 HOH A 46 946 240 HOH HOH . 
H 5 HOH A 47 947 24 HOH HOH . 
H 5 HOH A 48 948 43 HOH HOH . 
H 5 HOH A 49 949 56 HOH HOH . 
H 5 HOH A 50 950 37 HOH HOH . 
H 5 HOH A 51 951 21 HOH HOH . 
H 5 HOH A 52 952 150 HOH HOH . 
H 5 HOH A 53 953 10 HOH HOH . 
H 5 HOH A 54 954 135 HOH HOH . 
H 5 HOH A 55 955 35 HOH HOH . 
H 5 HOH A 56 956 18 HOH HOH . 
H 5 HOH A 57 957 64 HOH HOH . 
H 5 HOH A 58 958 55 HOH HOH . 
H 5 HOH A 59 959 7 HOH HOH . 
H 5 HOH A 60 960 168 HOH HOH . 
H 5 HOH A 61 961 9 HOH HOH . 
H 5 HOH A 62 962 65 HOH HOH . 
H 5 HOH A 63 963 101 HOH HOH . 
H 5 HOH A 64 964 17 HOH HOH . 
H 5 HOH A 65 965 67 HOH HOH . 
H 5 HOH A 66 966 22 HOH HOH . 
H 5 HOH A 67 967 51 HOH HOH . 
H 5 HOH A 68 968 105 HOH HOH . 
H 5 HOH A 69 969 191 HOH HOH . 
H 5 HOH A 70 970 144 HOH HOH . 
H 5 HOH A 71 971 99 HOH HOH . 
H 5 HOH A 72 972 32 HOH HOH . 
H 5 HOH A 73 973 169 HOH HOH . 
H 5 HOH A 74 974 46 HOH HOH . 
H 5 HOH A 75 975 59 HOH HOH . 
H 5 HOH A 76 976 102 HOH HOH . 
H 5 HOH A 77 977 83 HOH HOH . 
H 5 HOH A 78 978 38 HOH HOH . 
H 5 HOH A 79 979 61 HOH HOH . 
H 5 HOH A 80 980 156 HOH HOH . 
H 5 HOH A 81 981 19 HOH HOH . 
H 5 HOH A 82 982 205 HOH HOH . 
H 5 HOH A 83 983 137 HOH HOH . 
H 5 HOH A 84 984 180 HOH HOH . 
H 5 HOH A 85 985 245 HOH HOH . 
H 5 HOH A 86 986 74 HOH HOH . 
H 5 HOH A 87 987 126 HOH HOH . 
H 5 HOH A 88 988 20 HOH HOH . 
H 5 HOH A 89 989 116 HOH HOH . 
H 5 HOH A 90 990 23 HOH HOH . 
H 5 HOH A 91 991 82 HOH HOH . 
H 5 HOH A 92 992 217 HOH HOH . 
H 5 HOH A 93 993 29 HOH HOH . 
H 5 HOH A 94 994 163 HOH HOH . 
H 5 HOH A 95 995 251 HOH HOH . 
H 5 HOH A 96 996 73 HOH HOH . 
H 5 HOH A 97 997 52 HOH HOH . 
H 5 HOH A 98 998 69 HOH HOH . 
H 5 HOH A 99 999 195 HOH HOH . 
H 5 HOH A 100 1000 48 HOH HOH . 
H 5 HOH A 101 1001 58 HOH HOH . 
H 5 HOH A 102 1002 201 HOH HOH . 
H 5 HOH A 103 1003 200 HOH HOH . 
H 5 HOH A 104 1004 199 HOH HOH . 
H 5 HOH A 105 1005 1 HOH HOH . 
H 5 HOH A 106 1006 53 HOH HOH . 
H 5 HOH A 107 1007 229 HOH HOH . 
H 5 HOH A 108 1008 120 HOH HOH . 
H 5 HOH A 109 1009 230 HOH HOH . 
H 5 HOH A 110 1010 220 HOH HOH . 
H 5 HOH A 111 1011 40 HOH HOH . 
H 5 HOH A 112 1012 41 HOH HOH . 
H 5 HOH A 113 1013 39 HOH HOH . 
H 5 HOH A 114 1014 44 HOH HOH . 
H 5 HOH A 115 1015 202 HOH HOH . 
H 5 HOH A 116 1016 244 HOH HOH . 
H 5 HOH A 117 1017 241 HOH HOH . 
H 5 HOH A 118 1018 218 HOH HOH . 
H 5 HOH A 119 1019 85 HOH HOH . 
H 5 HOH A 120 1020 153 HOH HOH . 
H 5 HOH A 121 1021 211 HOH HOH . 
H 5 HOH A 122 1022 222 HOH HOH . 
H 5 HOH A 123 1023 216 HOH HOH . 
H 5 HOH A 124 1024 250 HOH HOH . 
H 5 HOH A 125 1025 242 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -23.967 -2.068 -47.782 1 77.26 ? C1 GOL 802 A 1 
HETATM 2 O O1 GOL . . . C 3 -24.251 -3.268 -47.099 1 67.69 ? O1 GOL 802 A 1 
HETATM 3 C C2 GOL . . . C 3 -22.585 -1.545 -47.404 1 95.72 ? C2 GOL 802 A 1 
HETATM 4 O O2 GOL . . . C 3 -21.714 -2.627 -47.158 1 106.54 ? O2 GOL 802 A 1 
HETATM 5 C C3 GOL . . . C 3 -22.028 -0.692 -48.538 1 89.15 ? C3 GOL 802 A 1 
HETATM 6 O O3 GOL . . . C 3 -20.769 -0.173 -48.174 1 95.61 ? O3 GOL 802 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           234 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#