data_5JZB # _model_server_result.job_id l2ZwDWAphBRhJ3cIt0ziBw _model_server_result.datetime_utc '2024-11-05 00:52:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jzb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 5JZB # _exptl.entry_id 5JZB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JZB _cell.length_a 82.03 _cell.length_b 82.33 _cell.length_c 194.25 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JZB _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_545 -x,-y-1/2,z -1 0 0 0 -1 0 0 0 1 0 -41.165 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 277 n n P O2 PO4 sing 278 n n P O3 PO4 sing 279 n n P O4 PO4 sing 280 n n # _atom_sites.entry_id 5JZB _atom_sites.fract_transf_matrix[1][1] 0.012191 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005148 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6OT A 1 301 1 6OT LIG . D 3 PO4 A 1 302 1 PO4 PO4 . E 2 6OT B 1 301 1 6OT LIG . F 4 HOH A 1 401 128 HOH HOH . F 4 HOH A 2 402 99 HOH HOH . F 4 HOH A 3 403 74 HOH HOH . F 4 HOH A 4 404 94 HOH HOH . F 4 HOH A 5 405 35 HOH HOH . F 4 HOH A 6 406 56 HOH HOH . F 4 HOH A 7 407 41 HOH HOH . F 4 HOH A 8 408 126 HOH HOH . F 4 HOH A 9 409 67 HOH HOH . F 4 HOH A 10 410 1 HOH HOH . F 4 HOH A 11 411 111 HOH HOH . F 4 HOH A 12 412 23 HOH HOH . F 4 HOH A 13 413 43 HOH HOH . F 4 HOH A 14 414 38 HOH HOH . F 4 HOH A 15 415 7 HOH HOH . F 4 HOH A 16 416 85 HOH HOH . F 4 HOH A 17 417 4 HOH HOH . F 4 HOH A 18 418 44 HOH HOH . F 4 HOH A 19 419 89 HOH HOH . F 4 HOH A 20 420 10 HOH HOH . F 4 HOH A 21 421 46 HOH HOH . F 4 HOH A 22 422 29 HOH HOH . F 4 HOH A 23 423 119 HOH HOH . F 4 HOH A 24 424 34 HOH HOH . F 4 HOH A 25 425 6 HOH HOH . F 4 HOH A 26 426 134 HOH HOH . F 4 HOH A 27 427 9 HOH HOH . F 4 HOH A 28 428 22 HOH HOH . F 4 HOH A 29 429 36 HOH HOH . F 4 HOH A 30 430 54 HOH HOH . F 4 HOH A 31 431 129 HOH HOH . F 4 HOH A 32 432 117 HOH HOH . F 4 HOH A 33 433 106 HOH HOH . F 4 HOH A 34 434 2 HOH HOH . F 4 HOH A 35 435 20 HOH HOH . F 4 HOH A 36 436 62 HOH HOH . F 4 HOH A 37 437 8 HOH HOH . F 4 HOH A 38 438 70 HOH HOH . F 4 HOH A 39 439 25 HOH HOH . F 4 HOH A 40 440 28 HOH HOH . F 4 HOH A 41 441 3 HOH HOH . F 4 HOH A 42 442 37 HOH HOH . F 4 HOH A 43 443 42 HOH HOH . F 4 HOH A 44 444 77 HOH HOH . F 4 HOH A 45 445 15 HOH HOH . F 4 HOH A 46 446 45 HOH HOH . F 4 HOH A 47 447 68 HOH HOH . F 4 HOH A 48 448 59 HOH HOH . F 4 HOH A 49 449 79 HOH HOH . F 4 HOH A 50 450 21 HOH HOH . F 4 HOH A 51 451 87 HOH HOH . F 4 HOH A 52 452 123 HOH HOH . F 4 HOH A 53 453 113 HOH HOH . F 4 HOH A 54 454 39 HOH HOH . F 4 HOH A 55 455 112 HOH HOH . F 4 HOH A 56 456 131 HOH HOH . F 4 HOH A 57 457 132 HOH HOH . F 4 HOH A 58 458 110 HOH HOH . F 4 HOH A 59 459 50 HOH HOH . F 4 HOH A 60 460 86 HOH HOH . F 4 HOH A 61 461 78 HOH HOH . F 4 HOH A 62 462 96 HOH HOH . F 4 HOH A 63 463 133 HOH HOH . F 4 HOH A 64 464 95 HOH HOH . F 4 HOH A 65 465 80 HOH HOH . F 4 HOH A 66 466 90 HOH HOH . G 4 HOH B 1 401 5 HOH HOH . G 4 HOH B 2 402 31 HOH HOH . G 4 HOH B 3 403 121 HOH HOH . G 4 HOH B 4 404 27 HOH HOH . G 4 HOH B 5 405 40 HOH HOH . G 4 HOH B 6 406 18 HOH HOH . G 4 HOH B 7 407 103 HOH HOH . G 4 HOH B 8 408 127 HOH HOH . G 4 HOH B 9 409 12 HOH HOH . G 4 HOH B 10 410 13 HOH HOH . G 4 HOH B 11 411 100 HOH HOH . G 4 HOH B 12 412 30 HOH HOH . G 4 HOH B 13 413 33 HOH HOH . G 4 HOH B 14 414 24 HOH HOH . G 4 HOH B 15 415 32 HOH HOH . G 4 HOH B 16 416 17 HOH HOH . G 4 HOH B 17 417 47 HOH HOH . G 4 HOH B 18 418 14 HOH HOH . G 4 HOH B 19 419 53 HOH HOH . G 4 HOH B 20 420 52 HOH HOH . G 4 HOH B 21 421 109 HOH HOH . G 4 HOH B 22 422 58 HOH HOH . G 4 HOH B 23 423 108 HOH HOH . G 4 HOH B 24 424 102 HOH HOH . G 4 HOH B 25 425 69 HOH HOH . G 4 HOH B 26 426 61 HOH HOH . G 4 HOH B 27 427 26 HOH HOH . G 4 HOH B 28 428 19 HOH HOH . G 4 HOH B 29 429 72 HOH HOH . G 4 HOH B 30 430 63 HOH HOH . G 4 HOH B 31 431 55 HOH HOH . G 4 HOH B 32 432 64 HOH HOH . G 4 HOH B 33 433 57 HOH HOH . G 4 HOH B 34 434 98 HOH HOH . G 4 HOH B 35 435 76 HOH HOH . G 4 HOH B 36 436 11 HOH HOH . G 4 HOH B 37 437 97 HOH HOH . G 4 HOH B 38 438 92 HOH HOH . G 4 HOH B 39 439 49 HOH HOH . G 4 HOH B 40 440 66 HOH HOH . G 4 HOH B 41 441 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 20.559 -6.888 17.277 1 80.94 ? P PO4 302 A 1 HETATM 2 O O1 PO4 . . . D 3 19.658 -7.681 16.363 1 80.09 ? O1 PO4 302 A 1 HETATM 3 O O2 PO4 . . . D 3 20.633 -5.463 16.786 1 82.4 ? O2 PO4 302 A 1 HETATM 4 O O3 PO4 . . . D 3 21.934 -7.503 17.281 1 81.65 ? O3 PO4 302 A 1 HETATM 5 O O4 PO4 . . . D 3 20.001 -6.9 18.675 1 80.42 ? O4 PO4 302 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #