data_5JZE # _model_server_result.job_id Uu7tHrK4jRJMrO-1m9zLBw _model_server_result.datetime_utc '2024-11-23 21:25:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jze # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 5JZE # _exptl.entry_id 5JZE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JZE _cell.length_a 65.992 _cell.length_b 65.992 _cell.length_c 121.992 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JZE _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 76 B GLY 154 1_555 E N1 AYE . B AYE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.3 ? covale ? covale2 E C2 AYE . B AYE 201 1_555 B SG CYS 40 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.69 ? covale ? covale3 C C GLY 76 D GLY 154 1_555 H N1 AYE . D AYE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? covale ? covale4 H C2 AYE . D AYE 201 1_555 D SG CYS 40 C CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.698 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 93 n n CAC OA1 FLC doub 94 n n CAC OA2 FLC sing 95 n n CA CB FLC sing 96 n n CA HA1 FLC sing 97 n n CA HA2 FLC sing 98 n n CB CBC FLC sing 99 n n CB CG FLC sing 100 n n CB OHB FLC sing 101 n n CBC OB1 FLC doub 102 n n CBC OB2 FLC sing 103 n n CG CGC FLC sing 104 n n CG HG1 FLC sing 105 n n CG HG2 FLC sing 106 n n CGC OG1 FLC doub 107 n n CGC OG2 FLC sing 108 n n OHB HOB FLC sing 109 n n # _atom_sites.entry_id 5JZE _atom_sites.fract_transf_matrix[1][1] 0.015153 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015153 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008197 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 AYE B 1 201 0 AYE AYE . F 4 FLC B 1 202 2 FLC FLC . G 4 FLC A 1 201 0 FLC FLC . H 3 AYE D 1 201 1 AYE AYE . I 4 FLC D 1 202 1 FLC FLC . J 4 FLC C 1 201 3 FLC FLC . K 5 HOH B 1 301 50 HOH HOH . K 5 HOH B 2 302 159 HOH HOH . K 5 HOH B 3 303 95 HOH HOH . K 5 HOH B 4 304 163 HOH HOH . K 5 HOH B 5 305 51 HOH HOH . K 5 HOH B 6 306 229 HOH HOH . K 5 HOH B 7 307 133 HOH HOH . K 5 HOH B 8 308 171 HOH HOH . K 5 HOH B 9 309 174 HOH HOH . K 5 HOH B 10 310 104 HOH HOH . K 5 HOH B 11 311 236 HOH HOH . K 5 HOH B 12 312 226 HOH HOH . K 5 HOH B 13 313 125 HOH HOH . K 5 HOH B 14 314 234 HOH HOH . K 5 HOH B 15 315 79 HOH HOH . K 5 HOH B 16 316 86 HOH HOH . K 5 HOH B 17 317 134 HOH HOH . K 5 HOH B 18 318 17 HOH HOH . K 5 HOH B 19 319 59 HOH HOH . K 5 HOH B 20 320 103 HOH HOH . K 5 HOH B 21 321 165 HOH HOH . K 5 HOH B 22 322 249 HOH HOH . K 5 HOH B 23 323 117 HOH HOH . K 5 HOH B 24 324 132 HOH HOH . K 5 HOH B 25 325 75 HOH HOH . K 5 HOH B 26 326 43 HOH HOH . K 5 HOH B 27 327 74 HOH HOH . K 5 HOH B 28 328 89 HOH HOH . K 5 HOH B 29 329 135 HOH HOH . K 5 HOH B 30 330 228 HOH HOH . K 5 HOH B 31 331 113 HOH HOH . K 5 HOH B 32 332 123 HOH HOH . K 5 HOH B 33 333 237 HOH HOH . K 5 HOH B 34 334 232 HOH HOH . K 5 HOH B 35 335 25 HOH HOH . K 5 HOH B 36 336 66 HOH HOH . K 5 HOH B 37 337 27 HOH HOH . K 5 HOH B 38 338 90 HOH HOH . K 5 HOH B 39 339 130 HOH HOH . K 5 HOH B 40 340 127 HOH HOH . K 5 HOH B 41 341 221 HOH HOH . K 5 HOH B 42 342 138 HOH HOH . K 5 HOH B 43 343 191 HOH HOH . K 5 HOH B 44 344 110 HOH HOH . K 5 HOH B 45 345 108 HOH HOH . K 5 HOH B 46 346 253 HOH HOH . K 5 HOH B 47 347 231 HOH HOH . K 5 HOH B 48 348 88 HOH HOH . L 5 HOH A 1 301 30 HOH HOH . L 5 HOH A 2 302 145 HOH HOH . L 5 HOH A 3 303 177 HOH HOH . L 5 HOH A 4 304 55 HOH HOH . L 5 HOH A 5 305 111 HOH HOH . L 5 HOH A 6 306 5 HOH HOH . L 5 HOH A 7 307 26 HOH HOH . L 5 HOH A 8 308 201 HOH HOH . L 5 HOH A 9 309 7 HOH HOH . L 5 HOH A 10 310 220 HOH HOH . L 5 HOH A 11 311 64 HOH HOH . L 5 HOH A 12 312 245 HOH HOH . L 5 HOH A 13 313 9 HOH HOH . L 5 HOH A 14 314 61 HOH HOH . L 5 HOH A 15 315 246 HOH HOH . L 5 HOH A 16 316 49 HOH HOH . L 5 HOH A 17 317 4 HOH HOH . L 5 HOH A 18 318 183 HOH HOH . L 5 HOH A 19 319 158 HOH HOH . L 5 HOH A 20 320 129 HOH HOH . L 5 HOH A 21 321 137 HOH HOH . L 5 HOH A 22 322 47 HOH HOH . L 5 HOH A 23 323 13 HOH HOH . L 5 HOH A 24 324 46 HOH HOH . L 5 HOH A 25 325 12 HOH HOH . L 5 HOH A 26 326 146 HOH HOH . L 5 HOH A 27 327 98 HOH HOH . L 5 HOH A 28 328 1 HOH HOH . L 5 HOH A 29 329 181 HOH HOH . L 5 HOH A 30 330 54 HOH HOH . L 5 HOH A 31 331 162 HOH HOH . L 5 HOH A 32 332 170 HOH HOH . L 5 HOH A 33 333 62 HOH HOH . L 5 HOH A 34 334 122 HOH HOH . L 5 HOH A 35 335 141 HOH HOH . L 5 HOH A 36 336 80 HOH HOH . L 5 HOH A 37 337 184 HOH HOH . L 5 HOH A 38 338 10 HOH HOH . L 5 HOH A 39 339 218 HOH HOH . L 5 HOH A 40 340 178 HOH HOH . L 5 HOH A 41 341 65 HOH HOH . L 5 HOH A 42 342 247 HOH HOH . L 5 HOH A 43 343 120 HOH HOH . L 5 HOH A 44 344 42 HOH HOH . L 5 HOH A 45 345 8 HOH HOH . L 5 HOH A 46 346 16 HOH HOH . L 5 HOH A 47 347 58 HOH HOH . L 5 HOH A 48 348 210 HOH HOH . L 5 HOH A 49 349 185 HOH HOH . L 5 HOH A 50 350 36 HOH HOH . L 5 HOH A 51 351 131 HOH HOH . L 5 HOH A 52 352 37 HOH HOH . L 5 HOH A 53 353 207 HOH HOH . L 5 HOH A 54 354 215 HOH HOH . L 5 HOH A 55 355 227 HOH HOH . L 5 HOH A 56 356 230 HOH HOH . L 5 HOH A 57 357 143 HOH HOH . L 5 HOH A 58 358 233 HOH HOH . L 5 HOH A 59 359 176 HOH HOH . L 5 HOH A 60 360 235 HOH HOH . L 5 HOH A 61 361 217 HOH HOH . L 5 HOH A 62 362 251 HOH HOH . L 5 HOH A 63 363 56 HOH HOH . L 5 HOH A 64 364 160 HOH HOH . L 5 HOH A 65 365 164 HOH HOH . L 5 HOH A 66 366 69 HOH HOH . L 5 HOH A 67 367 22 HOH HOH . L 5 HOH A 68 368 124 HOH HOH . L 5 HOH A 69 369 152 HOH HOH . L 5 HOH A 70 370 52 HOH HOH . L 5 HOH A 71 371 204 HOH HOH . L 5 HOH A 72 372 57 HOH HOH . L 5 HOH A 73 373 188 HOH HOH . L 5 HOH A 74 374 144 HOH HOH . L 5 HOH A 75 375 23 HOH HOH . L 5 HOH A 76 376 190 HOH HOH . L 5 HOH A 77 377 161 HOH HOH . L 5 HOH A 78 378 115 HOH HOH . L 5 HOH A 79 379 139 HOH HOH . L 5 HOH A 80 380 142 HOH HOH . L 5 HOH A 81 381 85 HOH HOH . M 5 HOH D 1 301 35 HOH HOH . M 5 HOH D 2 302 32 HOH HOH . M 5 HOH D 3 303 21 HOH HOH . M 5 HOH D 4 304 196 HOH HOH . M 5 HOH D 5 305 119 HOH HOH . M 5 HOH D 6 306 116 HOH HOH . M 5 HOH D 7 307 84 HOH HOH . M 5 HOH D 8 308 106 HOH HOH . M 5 HOH D 9 309 186 HOH HOH . M 5 HOH D 10 310 153 HOH HOH . M 5 HOH D 11 311 71 HOH HOH . M 5 HOH D 12 312 214 HOH HOH . M 5 HOH D 13 313 242 HOH HOH . M 5 HOH D 14 314 44 HOH HOH . M 5 HOH D 15 315 29 HOH HOH . M 5 HOH D 16 316 72 HOH HOH . M 5 HOH D 17 317 154 HOH HOH . M 5 HOH D 18 318 112 HOH HOH . M 5 HOH D 19 319 18 HOH HOH . M 5 HOH D 20 320 167 HOH HOH . M 5 HOH D 21 321 33 HOH HOH . M 5 HOH D 22 322 99 HOH HOH . M 5 HOH D 23 323 68 HOH HOH . M 5 HOH D 24 324 96 HOH HOH . M 5 HOH D 25 325 209 HOH HOH . M 5 HOH D 26 326 102 HOH HOH . M 5 HOH D 27 327 197 HOH HOH . M 5 HOH D 28 328 157 HOH HOH . M 5 HOH D 29 329 203 HOH HOH . M 5 HOH D 30 330 94 HOH HOH . M 5 HOH D 31 331 73 HOH HOH . M 5 HOH D 32 332 53 HOH HOH . M 5 HOH D 33 333 78 HOH HOH . M 5 HOH D 34 334 168 HOH HOH . M 5 HOH D 35 335 202 HOH HOH . M 5 HOH D 36 336 19 HOH HOH . M 5 HOH D 37 337 252 HOH HOH . M 5 HOH D 38 338 45 HOH HOH . M 5 HOH D 39 339 224 HOH HOH . M 5 HOH D 40 340 100 HOH HOH . N 5 HOH C 1 301 70 HOH HOH . N 5 HOH C 2 302 182 HOH HOH . N 5 HOH C 3 303 175 HOH HOH . N 5 HOH C 4 304 41 HOH HOH . N 5 HOH C 5 305 148 HOH HOH . N 5 HOH C 6 306 212 HOH HOH . N 5 HOH C 7 307 81 HOH HOH . N 5 HOH C 8 308 147 HOH HOH . N 5 HOH C 9 309 156 HOH HOH . N 5 HOH C 10 310 38 HOH HOH . N 5 HOH C 11 311 40 HOH HOH . N 5 HOH C 12 312 20 HOH HOH . N 5 HOH C 13 313 206 HOH HOH . N 5 HOH C 14 314 151 HOH HOH . N 5 HOH C 15 315 6 HOH HOH . N 5 HOH C 16 316 222 HOH HOH . N 5 HOH C 17 317 3 HOH HOH . N 5 HOH C 18 318 97 HOH HOH . N 5 HOH C 19 319 15 HOH HOH . N 5 HOH C 20 320 109 HOH HOH . N 5 HOH C 21 321 205 HOH HOH . N 5 HOH C 22 322 118 HOH HOH . N 5 HOH C 23 323 216 HOH HOH . N 5 HOH C 24 324 60 HOH HOH . N 5 HOH C 25 325 128 HOH HOH . N 5 HOH C 26 326 77 HOH HOH . N 5 HOH C 27 327 192 HOH HOH . N 5 HOH C 28 328 28 HOH HOH . N 5 HOH C 29 329 150 HOH HOH . N 5 HOH C 30 330 11 HOH HOH . N 5 HOH C 31 331 39 HOH HOH . N 5 HOH C 32 332 240 HOH HOH . N 5 HOH C 33 333 155 HOH HOH . N 5 HOH C 34 334 243 HOH HOH . N 5 HOH C 35 335 48 HOH HOH . N 5 HOH C 36 336 76 HOH HOH . N 5 HOH C 37 337 93 HOH HOH . N 5 HOH C 38 338 24 HOH HOH . N 5 HOH C 39 339 173 HOH HOH . N 5 HOH C 40 340 194 HOH HOH . N 5 HOH C 41 341 225 HOH HOH . N 5 HOH C 42 342 166 HOH HOH . N 5 HOH C 43 343 241 HOH HOH . N 5 HOH C 44 344 105 HOH HOH . N 5 HOH C 45 345 67 HOH HOH . N 5 HOH C 46 346 101 HOH HOH . N 5 HOH C 47 347 187 HOH HOH . N 5 HOH C 48 348 87 HOH HOH . N 5 HOH C 49 349 239 HOH HOH . N 5 HOH C 50 350 2 HOH HOH . N 5 HOH C 51 351 193 HOH HOH . N 5 HOH C 52 352 63 HOH HOH . N 5 HOH C 53 353 149 HOH HOH . N 5 HOH C 54 354 169 HOH HOH . N 5 HOH C 55 355 172 HOH HOH . N 5 HOH C 56 356 250 HOH HOH . N 5 HOH C 57 357 114 HOH HOH . N 5 HOH C 58 358 199 HOH HOH . N 5 HOH C 59 359 140 HOH HOH . N 5 HOH C 60 360 223 HOH HOH . N 5 HOH C 61 361 179 HOH HOH . N 5 HOH C 62 362 248 HOH HOH . N 5 HOH C 63 363 14 HOH HOH . N 5 HOH C 64 364 238 HOH HOH . N 5 HOH C 65 365 91 HOH HOH . N 5 HOH C 66 366 211 HOH HOH . N 5 HOH C 67 367 82 HOH HOH . N 5 HOH C 68 368 219 HOH HOH . N 5 HOH C 69 369 31 HOH HOH . N 5 HOH C 70 370 180 HOH HOH . N 5 HOH C 71 371 136 HOH HOH . N 5 HOH C 72 372 107 HOH HOH . N 5 HOH C 73 373 195 HOH HOH . N 5 HOH C 74 374 34 HOH HOH . N 5 HOH C 75 375 208 HOH HOH . N 5 HOH C 76 376 92 HOH HOH . N 5 HOH C 77 377 200 HOH HOH . N 5 HOH C 78 378 244 HOH HOH . N 5 HOH C 79 379 198 HOH HOH . N 5 HOH C 80 380 213 HOH HOH . N 5 HOH C 81 381 121 HOH HOH . N 5 HOH C 82 382 126 HOH HOH . N 5 HOH C 83 383 83 HOH HOH . N 5 HOH C 84 384 189 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . F 4 0.982 14.814 -16.578 1 58.79 ? CAC FLC 202 B 1 HETATM 2 C CA FLC . . . F 4 2.451 14.487 -16.41 1 60.36 ? CA FLC 202 B 1 HETATM 3 C CB FLC . . . F 4 3.18 13.946 -17.647 1 56.61 ? CB FLC 202 B 1 HETATM 4 C CBC FLC . . . F 4 2.255 13.955 -18.818 1 57.12 ? CBC FLC 202 B 1 HETATM 5 C CG FLC . . . F 4 4.43 14.809 -17.938 1 57.03 ? CG FLC 202 B 1 HETATM 6 C CGC FLC . . . F 4 5.292 14.244 -19.072 1 58.96 ? CGC FLC 202 B 1 HETATM 7 O OA1 FLC . . . F 4 0.215 13.951 -17.063 1 55.62 ? OA1 FLC 202 B 1 HETATM 8 O OA2 FLC . . . F 4 0.582 15.929 -16.181 1 58.26 ? OA2 FLC 202 B 1 HETATM 9 O OB1 FLC . . . F 4 2.174 15.02 -19.467 1 60.26 ? OB1 FLC 202 B 1 HETATM 10 O OB2 FLC . . . F 4 1.624 12.896 -19.067 1 52.31 ? OB2 FLC 202 B 1 HETATM 11 O OG1 FLC . . . F 4 4.856 14.264 -20.245 1 50.19 ? OG1 FLC 202 B 1 HETATM 12 O OG2 FLC . . . F 4 6.42 13.752 -18.809 1 58.73 ? OG2 FLC 202 B 1 HETATM 13 O OHB FLC . . . F 4 3.491 12.548 -17.444 1 51.86 ? OHB FLC 202 B 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #