data_5K0E
#
_model_server_result.job_id            w2ZDYVKuLTkCg50OfTFiJw 
_model_server_result.datetime_utc      '2024-11-27 18:32:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5k0e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    5K0E 
#
_exptl.entry_id    5K0E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5K0E 
_cell.length_a            77.793 
_cell.length_b            108.307 
_cell.length_c            69.302 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5K0E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O VAL 182 A VAL 183 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? 
metalc ? metalc2 A O ARG 183 A ARG 184 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? 
metalc ? metalc3 A O SER 185 A SER 186 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? 
metalc ? metalc4 A O PHE 188 A PHE 189 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc5 B NA NA . A NA 301 1_555 F O HOH . A HOH 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5K0E 
_atom_sites.fract_transf_matrix[1][1]    0.012855 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009233 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01443 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 301 1 NA NA . 
C 3 NHE A 1 302 2 NHE NHE . 
D 4 CL A 1 303 1 CL CL . 
E 5 6OZ A 1 304 1 6OZ L0R . 
F 6 HOH A 1 401 23 HOH HOH . 
F 6 HOH A 2 402 28 HOH HOH . 
F 6 HOH A 3 403 49 HOH HOH . 
F 6 HOH A 4 404 37 HOH HOH . 
F 6 HOH A 5 405 2 HOH HOH . 
F 6 HOH A 6 406 26 HOH HOH . 
F 6 HOH A 7 407 56 HOH HOH . 
F 6 HOH A 8 408 48 HOH HOH . 
F 6 HOH A 9 409 39 HOH HOH . 
F 6 HOH A 10 410 42 HOH HOH . 
F 6 HOH A 11 411 10 HOH HOH . 
F 6 HOH A 12 412 45 HOH HOH . 
F 6 HOH A 13 413 31 HOH HOH . 
F 6 HOH A 14 414 41 HOH HOH . 
F 6 HOH A 15 415 27 HOH HOH . 
F 6 HOH A 16 416 18 HOH HOH . 
F 6 HOH A 17 417 47 HOH HOH . 
F 6 HOH A 18 418 21 HOH HOH . 
F 6 HOH A 19 419 9 HOH HOH . 
F 6 HOH A 20 420 16 HOH HOH . 
F 6 HOH A 21 421 36 HOH HOH . 
F 6 HOH A 22 422 5 HOH HOH . 
F 6 HOH A 23 423 51 HOH HOH . 
F 6 HOH A 24 424 12 HOH HOH . 
F 6 HOH A 25 425 55 HOH HOH . 
F 6 HOH A 26 426 3 HOH HOH . 
F 6 HOH A 27 427 30 HOH HOH . 
F 6 HOH A 28 428 19 HOH HOH . 
F 6 HOH A 29 429 35 HOH HOH . 
F 6 HOH A 30 430 8 HOH HOH . 
F 6 HOH A 31 431 7 HOH HOH . 
F 6 HOH A 32 432 29 HOH HOH . 
F 6 HOH A 33 433 14 HOH HOH . 
F 6 HOH A 34 434 4 HOH HOH . 
F 6 HOH A 35 435 38 HOH HOH . 
F 6 HOH A 36 436 34 HOH HOH . 
F 6 HOH A 37 437 53 HOH HOH . 
F 6 HOH A 38 438 32 HOH HOH . 
F 6 HOH A 39 439 40 HOH HOH . 
F 6 HOH A 40 440 57 HOH HOH . 
F 6 HOH A 41 441 43 HOH HOH . 
F 6 HOH A 42 442 20 HOH HOH . 
F 6 HOH A 43 443 6 HOH HOH . 
F 6 HOH A 44 444 17 HOH HOH . 
F 6 HOH A 45 445 22 HOH HOH . 
F 6 HOH A 46 446 11 HOH HOH . 
F 6 HOH A 47 447 33 HOH HOH . 
F 6 HOH A 48 448 15 HOH HOH . 
F 6 HOH A 49 449 1 HOH HOH . 
F 6 HOH A 50 450 25 HOH HOH . 
F 6 HOH A 51 451 54 HOH HOH . 
F 6 HOH A 52 452 50 HOH HOH . 
F 6 HOH A 53 453 44 HOH HOH . 
F 6 HOH A 54 454 46 HOH HOH . 
F 6 HOH A 55 455 52 HOH HOH . 
F 6 HOH A 56 456 24 HOH HOH . 
F 6 HOH A 57 457 13 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -20.98 
_atom_site.Cartn_y               -44.469 
_atom_site.Cartn_z               -2.014 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        58.04 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#