data_5K0S # _model_server_result.job_id J46qJ2o1BxbqvrH8A9oCww _model_server_result.datetime_utc '2024-11-27 03:28:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 5K0S # _exptl.entry_id 5K0S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 376.28 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-({3-[(3,5-dichlorobenzyl)amino]propyl}amino)quinolin-4(1H)-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 110.58 _cell.angle_beta 87.63 _cell.angle_gamma 99.91 _cell.entry_id 5K0S _cell.length_a 45.27 _cell.length_b 99.74 _cell.length_c 104.63 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C19 H19 Cl2 N3 O' _chem_comp.formula_weight 376.28 _chem_comp.id 0OU _chem_comp.mon_nstd_flag . _chem_comp.name 2-({3-[(3,5-dichlorobenzyl)amino]propyl}amino)quinolin-4(1H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAU CAO 0OU sing 1 n n CAU CAI 0OU doub 2 n y CAU CAJ 0OU sing 3 n y CAO NAP 0OU sing 4 n n CL1 CAS 0OU sing 5 n n CAI CAS 0OU sing 6 n y CAS CAH 0OU doub 7 n y CAJ CAT 0OU doub 8 n y CAT CAH 0OU sing 9 n y CAT CL2 0OU sing 10 n n NAP CAM 0OU sing 11 n n CAM CAL 0OU sing 12 n n CAL CAN 0OU sing 13 n n CAN NAQ 0OU sing 14 n n NAQ CAV 0OU sing 15 n n CAV CAK 0OU doub 16 n n CAV NAR 0OU sing 17 n n CAK CAW 0OU sing 18 n n NAR CAX 0OU sing 19 n n CAW OAA 0OU doub 20 n n CAW CAY 0OU sing 21 n n CAX CAY 0OU doub 22 n y CAX CAF 0OU sing 23 n y CAY CAG 0OU sing 24 n y CAF CAD 0OU doub 25 n y CAG CAE 0OU doub 26 n y CAD CAE 0OU sing 27 n y CAI H1 0OU sing 28 n n CAH H2 0OU sing 29 n n CAJ H3 0OU sing 30 n n CAO H4 0OU sing 31 n n CAO H5 0OU sing 32 n n NAP H6 0OU sing 33 n n CAM H8 0OU sing 34 n n CAM H9 0OU sing 35 n n CAL H10 0OU sing 36 n n CAL H11 0OU sing 37 n n CAN H12 0OU sing 38 n n CAN H13 0OU sing 39 n n NAQ H14 0OU sing 40 n n CAK H15 0OU sing 41 n n CAG H17 0OU sing 42 n n CAE H18 0OU sing 43 n n CAD H19 0OU sing 44 n n CAF H20 0OU sing 45 n n NAR H7 0OU sing 46 n n # _atom_sites.entry_id 5K0S _atom_sites.fract_transf_matrix[1][1] 0.02209 _atom_sites.fract_transf_matrix[1][2] 0.003858 _atom_sites.fract_transf_matrix[1][3] 0.000465 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010178 _atom_sites.fract_transf_matrix[2][3] 0.003801 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 0OU A 1 601 520 0OU 0OU . E 2 0OU B 1 601 520 0OU 0OU . F 2 0OU C 1 601 520 0OU 0OU . G 3 HOH A 1 701 180 HOH HOH . G 3 HOH A 2 702 178 HOH HOH . G 3 HOH A 3 703 61 HOH HOH . G 3 HOH A 4 704 183 HOH HOH . G 3 HOH A 5 705 23 HOH HOH . G 3 HOH A 6 706 184 HOH HOH . G 3 HOH A 7 707 121 HOH HOH . G 3 HOH A 8 708 174 HOH HOH . G 3 HOH A 9 709 27 HOH HOH . G 3 HOH A 10 710 176 HOH HOH . G 3 HOH A 11 711 171 HOH HOH . G 3 HOH A 12 712 136 HOH HOH . G 3 HOH A 13 713 55 HOH HOH . G 3 HOH A 14 714 127 HOH HOH . G 3 HOH A 15 715 173 HOH HOH . G 3 HOH A 16 716 73 HOH HOH . G 3 HOH A 17 717 26 HOH HOH . G 3 HOH A 18 718 62 HOH HOH . G 3 HOH A 19 719 181 HOH HOH . G 3 HOH A 20 720 75 HOH HOH . G 3 HOH A 21 721 18 HOH HOH . G 3 HOH A 22 722 170 HOH HOH . G 3 HOH A 23 723 122 HOH HOH . G 3 HOH A 24 724 129 HOH HOH . G 3 HOH A 25 725 134 HOH HOH . G 3 HOH A 26 726 65 HOH HOH . G 3 HOH A 27 727 132 HOH HOH . G 3 HOH A 28 728 74 HOH HOH . G 3 HOH A 29 729 70 HOH HOH . G 3 HOH A 30 730 179 HOH HOH . G 3 HOH A 31 731 66 HOH HOH . G 3 HOH A 32 732 56 HOH HOH . G 3 HOH A 33 733 22 HOH HOH . G 3 HOH A 34 734 16 HOH HOH . G 3 HOH A 35 735 71 HOH HOH . G 3 HOH A 36 736 72 HOH HOH . G 3 HOH A 37 737 126 HOH HOH . G 3 HOH A 38 738 123 HOH HOH . G 3 HOH A 39 739 125 HOH HOH . G 3 HOH A 40 740 128 HOH HOH . G 3 HOH A 41 741 58 HOH HOH . G 3 HOH A 42 742 64 HOH HOH . G 3 HOH A 43 743 131 HOH HOH . G 3 HOH A 44 744 25 HOH HOH . G 3 HOH A 45 745 24 HOH HOH . G 3 HOH A 46 746 160 HOH HOH . G 3 HOH A 47 747 20 HOH HOH . G 3 HOH A 48 748 130 HOH HOH . G 3 HOH A 49 749 15 HOH HOH . G 3 HOH A 50 750 21 HOH HOH . G 3 HOH A 51 751 161 HOH HOH . G 3 HOH A 52 752 63 HOH HOH . G 3 HOH A 53 753 177 HOH HOH . G 3 HOH A 54 754 172 HOH HOH . G 3 HOH A 55 755 133 HOH HOH . G 3 HOH A 56 756 185 HOH HOH . G 3 HOH A 57 757 69 HOH HOH . G 3 HOH A 58 758 163 HOH HOH . G 3 HOH A 59 759 162 HOH HOH . G 3 HOH A 60 760 135 HOH HOH . G 3 HOH A 61 761 57 HOH HOH . G 3 HOH A 62 762 182 HOH HOH . G 3 HOH A 63 763 164 HOH HOH . G 3 HOH A 64 764 76 HOH HOH . G 3 HOH A 65 765 19 HOH HOH . G 3 HOH A 66 766 175 HOH HOH . G 3 HOH A 67 767 67 HOH HOH . G 3 HOH A 68 768 60 HOH HOH . G 3 HOH A 69 769 17 HOH HOH . H 3 HOH B 1 701 137 HOH HOH . H 3 HOH B 2 702 8 HOH HOH . H 3 HOH B 3 703 38 HOH HOH . H 3 HOH B 4 704 48 HOH HOH . H 3 HOH B 5 705 41 HOH HOH . H 3 HOH B 6 706 2 HOH HOH . H 3 HOH B 7 707 142 HOH HOH . H 3 HOH B 8 708 211 HOH HOH . H 3 HOH B 9 709 93 HOH HOH . H 3 HOH B 10 710 82 HOH HOH . H 3 HOH B 11 711 148 HOH HOH . H 3 HOH B 12 712 141 HOH HOH . H 3 HOH B 13 713 212 HOH HOH . H 3 HOH B 14 714 150 HOH HOH . H 3 HOH B 15 715 83 HOH HOH . H 3 HOH B 16 716 97 HOH HOH . H 3 HOH B 17 717 189 HOH HOH . H 3 HOH B 18 718 196 HOH HOH . H 3 HOH B 19 719 193 HOH HOH . H 3 HOH B 20 720 144 HOH HOH . H 3 HOH B 21 721 201 HOH HOH . H 3 HOH B 22 722 124 HOH HOH . H 3 HOH B 23 723 43 HOH HOH . H 3 HOH B 24 724 138 HOH HOH . H 3 HOH B 25 725 30 HOH HOH . H 3 HOH B 26 726 115 HOH HOH . H 3 HOH B 27 727 116 HOH HOH . H 3 HOH B 28 728 28 HOH HOH . H 3 HOH B 29 729 206 HOH HOH . H 3 HOH B 30 730 167 HOH HOH . H 3 HOH B 31 731 147 HOH HOH . H 3 HOH B 32 732 44 HOH HOH . H 3 HOH B 33 733 149 HOH HOH . H 3 HOH B 34 734 95 HOH HOH . H 3 HOH B 35 735 33 HOH HOH . H 3 HOH B 36 736 205 HOH HOH . H 3 HOH B 37 737 143 HOH HOH . H 3 HOH B 38 738 40 HOH HOH . H 3 HOH B 39 739 31 HOH HOH . H 3 HOH B 40 740 200 HOH HOH . H 3 HOH B 41 741 79 HOH HOH . H 3 HOH B 42 742 1 HOH HOH . H 3 HOH B 43 743 29 HOH HOH . H 3 HOH B 44 744 207 HOH HOH . H 3 HOH B 45 745 168 HOH HOH . H 3 HOH B 46 746 85 HOH HOH . H 3 HOH B 47 747 204 HOH HOH . H 3 HOH B 48 748 35 HOH HOH . H 3 HOH B 49 749 119 HOH HOH . H 3 HOH B 50 750 99 HOH HOH . H 3 HOH B 51 751 11 HOH HOH . H 3 HOH B 52 752 77 HOH HOH . H 3 HOH B 53 753 12 HOH HOH . H 3 HOH B 54 754 14 HOH HOH . H 3 HOH B 55 755 3 HOH HOH . H 3 HOH B 56 756 4 HOH HOH . H 3 HOH B 57 757 6 HOH HOH . H 3 HOH B 58 758 120 HOH HOH . H 3 HOH B 59 759 42 HOH HOH . H 3 HOH B 60 760 190 HOH HOH . H 3 HOH B 61 761 5 HOH HOH . H 3 HOH B 62 762 195 HOH HOH . H 3 HOH B 63 763 86 HOH HOH . H 3 HOH B 64 764 210 HOH HOH . H 3 HOH B 65 765 81 HOH HOH . H 3 HOH B 66 766 80 HOH HOH . H 3 HOH B 67 767 37 HOH HOH . H 3 HOH B 68 768 151 HOH HOH . H 3 HOH B 69 769 36 HOH HOH . H 3 HOH B 70 770 7 HOH HOH . H 3 HOH B 71 771 146 HOH HOH . H 3 HOH B 72 772 87 HOH HOH . H 3 HOH B 73 773 166 HOH HOH . H 3 HOH B 74 774 100 HOH HOH . H 3 HOH B 75 775 188 HOH HOH . H 3 HOH B 76 776 209 HOH HOH . H 3 HOH B 77 777 94 HOH HOH . H 3 HOH B 78 778 91 HOH HOH . H 3 HOH B 79 779 84 HOH HOH . H 3 HOH B 80 780 145 HOH HOH . H 3 HOH B 81 781 13 HOH HOH . H 3 HOH B 82 782 34 HOH HOH . H 3 HOH B 83 783 90 HOH HOH . H 3 HOH B 84 784 203 HOH HOH . H 3 HOH B 85 785 186 HOH HOH . H 3 HOH B 86 786 10 HOH HOH . H 3 HOH B 87 787 59 HOH HOH . H 3 HOH B 88 788 191 HOH HOH . H 3 HOH B 89 789 32 HOH HOH . H 3 HOH B 90 790 187 HOH HOH . H 3 HOH B 91 791 192 HOH HOH . H 3 HOH B 92 792 54 HOH HOH . H 3 HOH B 93 793 140 HOH HOH . H 3 HOH B 94 794 165 HOH HOH . H 3 HOH B 95 795 39 HOH HOH . H 3 HOH B 96 796 96 HOH HOH . H 3 HOH B 97 797 89 HOH HOH . H 3 HOH B 98 798 45 HOH HOH . H 3 HOH B 99 799 9 HOH HOH . H 3 HOH B 100 800 98 HOH HOH . H 3 HOH B 101 801 78 HOH HOH . H 3 HOH B 102 802 92 HOH HOH . H 3 HOH B 103 803 194 HOH HOH . H 3 HOH B 104 804 199 HOH HOH . H 3 HOH B 105 805 118 HOH HOH . H 3 HOH B 106 806 139 HOH HOH . H 3 HOH B 107 807 88 HOH HOH . H 3 HOH B 108 808 202 HOH HOH . H 3 HOH B 109 809 197 HOH HOH . H 3 HOH B 110 810 208 HOH HOH . H 3 HOH B 111 811 117 HOH HOH . H 3 HOH B 112 812 198 HOH HOH . H 3 HOH B 113 813 169 HOH HOH . I 3 HOH C 1 701 159 HOH HOH . I 3 HOH C 2 702 108 HOH HOH . I 3 HOH C 3 703 109 HOH HOH . I 3 HOH C 4 704 114 HOH HOH . I 3 HOH C 5 705 216 HOH HOH . I 3 HOH C 6 706 113 HOH HOH . I 3 HOH C 7 707 158 HOH HOH . I 3 HOH C 8 708 49 HOH HOH . I 3 HOH C 9 709 102 HOH HOH . I 3 HOH C 10 710 112 HOH HOH . I 3 HOH C 11 711 217 HOH HOH . I 3 HOH C 12 712 157 HOH HOH . I 3 HOH C 13 713 106 HOH HOH . I 3 HOH C 14 714 218 HOH HOH . I 3 HOH C 15 715 103 HOH HOH . I 3 HOH C 16 716 214 HOH HOH . I 3 HOH C 17 717 111 HOH HOH . I 3 HOH C 18 718 152 HOH HOH . I 3 HOH C 19 719 156 HOH HOH . I 3 HOH C 20 720 155 HOH HOH . I 3 HOH C 21 721 110 HOH HOH . I 3 HOH C 22 722 51 HOH HOH . I 3 HOH C 23 723 68 HOH HOH . I 3 HOH C 24 724 101 HOH HOH . I 3 HOH C 25 725 46 HOH HOH . I 3 HOH C 26 726 107 HOH HOH . I 3 HOH C 27 727 153 HOH HOH . I 3 HOH C 28 728 215 HOH HOH . I 3 HOH C 29 729 213 HOH HOH . I 3 HOH C 30 730 47 HOH HOH . I 3 HOH C 31 731 50 HOH HOH . I 3 HOH C 32 732 52 HOH HOH . I 3 HOH C 33 733 53 HOH HOH . I 3 HOH C 34 734 154 HOH HOH . I 3 HOH C 35 735 104 HOH HOH . I 3 HOH C 36 736 219 HOH HOH . I 3 HOH C 37 737 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAI 0OU . . . D 2 28.959 9.964 11.714 1 48.54 ? CAI 0OU 601 A 1 HETATM 2 C CAS 0OU . . . D 2 27.906 10.51 10.951 1 49.01 ? CAS 0OU 601 A 1 HETATM 3 CL CL1 0OU . . . D 2 27.929 10.383 9.241 1 50.38 ? CL1 0OU 601 A 1 HETATM 4 C CAH 0OU . . . D 2 26.854 11.154 11.585 1 50.29 ? CAH 0OU 601 A 1 HETATM 5 C CAT 0OU . . . D 2 26.837 11.253 12.951 1 51.39 ? CAT 0OU 601 A 1 HETATM 6 CL CL2 0OU . . . D 2 25.501 12.069 13.755 1 56.84 ? CL2 0OU 601 A 1 HETATM 7 C CAJ 0OU . . . D 2 27.899 10.699 13.723 1 49.4 ? CAJ 0OU 601 A 1 HETATM 8 C CAU 0OU . . . D 2 28.949 10.059 13.091 1 51.21 ? CAU 0OU 601 A 1 HETATM 9 C CAO 0OU . . . D 2 30.081 9.467 13.912 1 54.65 ? CAO 0OU 601 A 1 HETATM 10 N NAP 0OU . . . D 2 30.733 8.378 13.203 1 54.83 ? NAP 0OU 601 A 1 HETATM 11 C CAM 0OU . . . D 2 29.952 7.167 13.368 1 53.4 ? CAM 0OU 601 A 1 HETATM 12 C CAL 0OU . . . D 2 30.795 5.975 13.994 1 50.06 ? CAL 0OU 601 A 1 HETATM 13 C CAN 0OU . . . D 2 30.718 4.722 13.115 1 48.38 ? CAN 0OU 601 A 1 HETATM 14 N NAQ 0OU . . . D 2 29.34 4.24 13.024 1 44.47 ? NAQ 0OU 601 A 1 HETATM 15 C CAV 0OU . . . D 2 28.894 3.508 11.872 1 38.75 ? CAV 0OU 601 A 1 HETATM 16 C CAK 0OU . . . D 2 29.787 2.764 11.129 1 36.81 ? CAK 0OU 601 A 1 HETATM 17 C CAW 0OU . . . D 2 29.352 2.052 10.009 1 41.5 ? CAW 0OU 601 A 1 HETATM 18 O OAA 0OU . . . D 2 30.238 1.32 9.281 1 45.64 ? OAA 0OU 601 A 1 HETATM 19 C CAY 0OU . . . D 2 27.988 2.097 9.636 1 38.78 ? CAY 0OU 601 A 1 HETATM 20 C CAG 0OU . . . D 2 27.5 1.339 8.431 1 32.76 ? CAG 0OU 601 A 1 HETATM 21 C CAE 0OU . . . D 2 26.161 1.384 8.069 1 32.74 ? CAE 0OU 601 A 1 HETATM 22 C CAD 0OU . . . D 2 25.258 2.142 8.825 1 33.54 ? CAD 0OU 601 A 1 HETATM 23 C CAF 0OU . . . D 2 25.731 2.878 9.995 1 34.35 ? CAF 0OU 601 A 1 HETATM 24 C CAX 0OU . . . D 2 27.131 2.824 10.368 1 38.35 ? CAX 0OU 601 A 1 HETATM 25 N NAR 0OU . . . D 2 27.593 3.551 11.519 1 38.99 ? NAR 0OU 601 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #