data_5K1P # _model_server_result.job_id 8lmUWs4RpudUOg53LOFhuQ _model_server_result.datetime_utc '2025-01-11 19:58:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 5K1P # _exptl.entry_id 5K1P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.92 _cell.angle_gamma 90 _cell.entry_id 5K1P _cell.length_a 102.493 _cell.length_b 44.358 _cell.length_c 64.314 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -11.079563 0 63.352458 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 210 A GLU 396 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc2 A OE2 GLU 210 A GLU 396 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc3 A OG SER 213 A SER 399 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc4 B O1B ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc5 B O1A ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc6 B O2G ANP . A ANP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc7 B O2B ANP . A ANP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc8 C MG MG . A MG 502 1_555 E O HOH . A HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc9 C MG MG . A MG 502 1_555 E O HOH . A HOH 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc10 D MG MG . A MG 503 1_555 E O HOH . A HOH 670 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc11 D MG MG . A MG 503 1_555 E O HOH . A HOH 722 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc12 D MG MG . A MG 503 1_555 E O HOH . A HOH 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5K1P _atom_sites.fract_transf_matrix[1][1] 0.009757 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001707 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022544 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 501 1 ANP ANP . C 3 MG A 1 502 1 MG MG . D 3 MG A 1 503 2 MG MG . E 4 HOH A 1 601 191 HOH HOH . E 4 HOH A 2 602 181 HOH HOH . E 4 HOH A 3 603 209 HOH HOH . E 4 HOH A 4 604 173 HOH HOH . E 4 HOH A 5 605 163 HOH HOH . E 4 HOH A 6 606 16 HOH HOH . E 4 HOH A 7 607 240 HOH HOH . E 4 HOH A 8 608 99 HOH HOH . E 4 HOH A 9 609 162 HOH HOH . E 4 HOH A 10 610 166 HOH HOH . E 4 HOH A 11 611 137 HOH HOH . E 4 HOH A 12 612 110 HOH HOH . E 4 HOH A 13 613 270 HOH HOH . E 4 HOH A 14 614 171 HOH HOH . E 4 HOH A 15 615 114 HOH HOH . E 4 HOH A 16 616 196 HOH HOH . E 4 HOH A 17 617 32 HOH HOH . E 4 HOH A 18 618 188 HOH HOH . E 4 HOH A 19 619 111 HOH HOH . E 4 HOH A 20 620 26 HOH HOH . E 4 HOH A 21 621 155 HOH HOH . E 4 HOH A 22 622 92 HOH HOH . E 4 HOH A 23 623 251 HOH HOH . E 4 HOH A 24 624 62 HOH HOH . E 4 HOH A 25 625 230 HOH HOH . E 4 HOH A 26 626 259 HOH HOH . E 4 HOH A 27 627 85 HOH HOH . E 4 HOH A 28 628 12 HOH HOH . E 4 HOH A 29 629 64 HOH HOH . E 4 HOH A 30 630 53 HOH HOH . E 4 HOH A 31 631 138 HOH HOH . E 4 HOH A 32 632 38 HOH HOH . E 4 HOH A 33 633 145 HOH HOH . E 4 HOH A 34 634 105 HOH HOH . E 4 HOH A 35 635 158 HOH HOH . E 4 HOH A 36 636 22 HOH HOH . E 4 HOH A 37 637 75 HOH HOH . E 4 HOH A 38 638 49 HOH HOH . E 4 HOH A 39 639 264 HOH HOH . E 4 HOH A 40 640 156 HOH HOH . E 4 HOH A 41 641 210 HOH HOH . E 4 HOH A 42 642 192 HOH HOH . E 4 HOH A 43 643 79 HOH HOH . E 4 HOH A 44 644 51 HOH HOH . E 4 HOH A 45 645 185 HOH HOH . E 4 HOH A 46 646 17 HOH HOH . E 4 HOH A 47 647 44 HOH HOH . E 4 HOH A 48 648 142 HOH HOH . E 4 HOH A 49 649 39 HOH HOH . E 4 HOH A 50 650 212 HOH HOH . E 4 HOH A 51 651 175 HOH HOH . E 4 HOH A 52 652 153 HOH HOH . E 4 HOH A 53 653 73 HOH HOH . E 4 HOH A 54 654 139 HOH HOH . E 4 HOH A 55 655 6 HOH HOH . E 4 HOH A 56 656 86 HOH HOH . E 4 HOH A 57 657 135 HOH HOH . E 4 HOH A 58 658 131 HOH HOH . E 4 HOH A 59 659 55 HOH HOH . E 4 HOH A 60 660 132 HOH HOH . E 4 HOH A 61 661 237 HOH HOH . E 4 HOH A 62 662 96 HOH HOH . E 4 HOH A 63 663 126 HOH HOH . E 4 HOH A 64 664 266 HOH HOH . E 4 HOH A 65 665 100 HOH HOH . E 4 HOH A 66 666 84 HOH HOH . E 4 HOH A 67 667 40 HOH HOH . E 4 HOH A 68 668 95 HOH HOH . E 4 HOH A 69 669 98 HOH HOH . E 4 HOH A 70 670 14 HOH HOH . E 4 HOH A 71 671 11 HOH HOH . E 4 HOH A 72 672 63 HOH HOH . E 4 HOH A 73 673 24 HOH HOH . E 4 HOH A 74 674 25 HOH HOH . E 4 HOH A 75 675 97 HOH HOH . E 4 HOH A 76 676 20 HOH HOH . E 4 HOH A 77 677 154 HOH HOH . E 4 HOH A 78 678 152 HOH HOH . E 4 HOH A 79 679 93 HOH HOH . E 4 HOH A 80 680 91 HOH HOH . E 4 HOH A 81 681 127 HOH HOH . E 4 HOH A 82 682 2 HOH HOH . E 4 HOH A 83 683 207 HOH HOH . E 4 HOH A 84 684 159 HOH HOH . E 4 HOH A 85 685 199 HOH HOH . E 4 HOH A 86 686 7 HOH HOH . E 4 HOH A 87 687 35 HOH HOH . E 4 HOH A 88 688 3 HOH HOH . E 4 HOH A 89 689 28 HOH HOH . E 4 HOH A 90 690 167 HOH HOH . E 4 HOH A 91 691 43 HOH HOH . E 4 HOH A 92 692 235 HOH HOH . E 4 HOH A 93 693 59 HOH HOH . E 4 HOH A 94 694 228 HOH HOH . E 4 HOH A 95 695 89 HOH HOH . E 4 HOH A 96 696 268 HOH HOH . E 4 HOH A 97 697 18 HOH HOH . E 4 HOH A 98 698 21 HOH HOH . E 4 HOH A 99 699 180 HOH HOH . E 4 HOH A 100 700 226 HOH HOH . E 4 HOH A 101 701 57 HOH HOH . E 4 HOH A 102 702 15 HOH HOH . E 4 HOH A 103 703 255 HOH HOH . E 4 HOH A 104 704 31 HOH HOH . E 4 HOH A 105 705 193 HOH HOH . E 4 HOH A 106 706 149 HOH HOH . E 4 HOH A 107 707 214 HOH HOH . E 4 HOH A 108 708 48 HOH HOH . E 4 HOH A 109 709 102 HOH HOH . E 4 HOH A 110 710 27 HOH HOH . E 4 HOH A 111 711 248 HOH HOH . E 4 HOH A 112 712 83 HOH HOH . E 4 HOH A 113 713 90 HOH HOH . E 4 HOH A 114 714 4 HOH HOH . E 4 HOH A 115 715 222 HOH HOH . E 4 HOH A 116 716 72 HOH HOH . E 4 HOH A 117 717 76 HOH HOH . E 4 HOH A 118 718 30 HOH HOH . E 4 HOH A 119 719 68 HOH HOH . E 4 HOH A 120 720 147 HOH HOH . E 4 HOH A 121 721 202 HOH HOH . E 4 HOH A 122 722 50 HOH HOH . E 4 HOH A 123 723 45 HOH HOH . E 4 HOH A 124 724 71 HOH HOH . E 4 HOH A 125 725 70 HOH HOH . E 4 HOH A 126 726 121 HOH HOH . E 4 HOH A 127 727 94 HOH HOH . E 4 HOH A 128 728 238 HOH HOH . E 4 HOH A 129 729 242 HOH HOH . E 4 HOH A 130 730 177 HOH HOH . E 4 HOH A 131 731 221 HOH HOH . E 4 HOH A 132 732 65 HOH HOH . E 4 HOH A 133 733 13 HOH HOH . E 4 HOH A 134 734 10 HOH HOH . E 4 HOH A 135 735 146 HOH HOH . E 4 HOH A 136 736 116 HOH HOH . E 4 HOH A 137 737 133 HOH HOH . E 4 HOH A 138 738 219 HOH HOH . E 4 HOH A 139 739 182 HOH HOH . E 4 HOH A 140 740 82 HOH HOH . E 4 HOH A 141 741 140 HOH HOH . E 4 HOH A 142 742 29 HOH HOH . E 4 HOH A 143 743 136 HOH HOH . E 4 HOH A 144 744 1 HOH HOH . E 4 HOH A 145 745 8 HOH HOH . E 4 HOH A 146 746 218 HOH HOH . E 4 HOH A 147 747 23 HOH HOH . E 4 HOH A 148 748 37 HOH HOH . E 4 HOH A 149 749 241 HOH HOH . E 4 HOH A 150 750 33 HOH HOH . E 4 HOH A 151 751 112 HOH HOH . E 4 HOH A 152 752 165 HOH HOH . E 4 HOH A 153 753 41 HOH HOH . E 4 HOH A 154 754 58 HOH HOH . E 4 HOH A 155 755 172 HOH HOH . E 4 HOH A 156 756 81 HOH HOH . E 4 HOH A 157 757 258 HOH HOH . E 4 HOH A 158 758 106 HOH HOH . E 4 HOH A 159 759 151 HOH HOH . E 4 HOH A 160 760 224 HOH HOH . E 4 HOH A 161 761 87 HOH HOH . E 4 HOH A 162 762 274 HOH HOH . E 4 HOH A 163 763 5 HOH HOH . E 4 HOH A 164 764 107 HOH HOH . E 4 HOH A 165 765 277 HOH HOH . E 4 HOH A 166 766 101 HOH HOH . E 4 HOH A 167 767 103 HOH HOH . E 4 HOH A 168 768 195 HOH HOH . E 4 HOH A 169 769 115 HOH HOH . E 4 HOH A 170 770 229 HOH HOH . E 4 HOH A 171 771 36 HOH HOH . E 4 HOH A 172 772 125 HOH HOH . E 4 HOH A 173 773 183 HOH HOH . E 4 HOH A 174 774 257 HOH HOH . E 4 HOH A 175 775 161 HOH HOH . E 4 HOH A 176 776 56 HOH HOH . E 4 HOH A 177 777 88 HOH HOH . E 4 HOH A 178 778 9 HOH HOH . E 4 HOH A 179 779 60 HOH HOH . E 4 HOH A 180 780 67 HOH HOH . E 4 HOH A 181 781 174 HOH HOH . E 4 HOH A 182 782 164 HOH HOH . E 4 HOH A 183 783 34 HOH HOH . E 4 HOH A 184 784 234 HOH HOH . E 4 HOH A 185 785 204 HOH HOH . E 4 HOH A 186 786 54 HOH HOH . E 4 HOH A 187 787 46 HOH HOH . E 4 HOH A 188 788 190 HOH HOH . E 4 HOH A 189 789 69 HOH HOH . E 4 HOH A 190 790 144 HOH HOH . E 4 HOH A 191 791 261 HOH HOH . E 4 HOH A 192 792 120 HOH HOH . E 4 HOH A 193 793 168 HOH HOH . E 4 HOH A 194 794 197 HOH HOH . E 4 HOH A 195 795 256 HOH HOH . E 4 HOH A 196 796 109 HOH HOH . E 4 HOH A 197 797 275 HOH HOH . E 4 HOH A 198 798 104 HOH HOH . E 4 HOH A 199 799 66 HOH HOH . E 4 HOH A 200 800 249 HOH HOH . E 4 HOH A 201 801 170 HOH HOH . E 4 HOH A 202 802 77 HOH HOH . E 4 HOH A 203 803 80 HOH HOH . E 4 HOH A 204 804 200 HOH HOH . E 4 HOH A 205 805 260 HOH HOH . E 4 HOH A 206 806 78 HOH HOH . E 4 HOH A 207 807 233 HOH HOH . E 4 HOH A 208 808 227 HOH HOH . E 4 HOH A 209 809 42 HOH HOH . E 4 HOH A 210 810 74 HOH HOH . E 4 HOH A 211 811 225 HOH HOH . E 4 HOH A 212 812 122 HOH HOH . E 4 HOH A 213 813 187 HOH HOH . E 4 HOH A 214 814 179 HOH HOH . E 4 HOH A 215 815 150 HOH HOH . E 4 HOH A 216 816 217 HOH HOH . E 4 HOH A 217 817 178 HOH HOH . E 4 HOH A 218 818 280 HOH HOH . E 4 HOH A 219 819 203 HOH HOH . E 4 HOH A 220 820 186 HOH HOH . E 4 HOH A 221 821 52 HOH HOH . E 4 HOH A 222 822 246 HOH HOH . E 4 HOH A 223 823 263 HOH HOH . E 4 HOH A 224 824 232 HOH HOH . E 4 HOH A 225 825 143 HOH HOH . E 4 HOH A 226 826 279 HOH HOH . E 4 HOH A 227 827 271 HOH HOH . E 4 HOH A 228 828 206 HOH HOH . E 4 HOH A 229 829 157 HOH HOH . E 4 HOH A 230 830 160 HOH HOH . E 4 HOH A 231 831 231 HOH HOH . E 4 HOH A 232 832 281 HOH HOH . E 4 HOH A 233 833 272 HOH HOH . E 4 HOH A 234 834 134 HOH HOH . E 4 HOH A 235 835 267 HOH HOH . E 4 HOH A 236 836 276 HOH HOH . E 4 HOH A 237 837 130 HOH HOH . E 4 HOH A 238 838 169 HOH HOH . E 4 HOH A 239 839 216 HOH HOH . E 4 HOH A 240 840 61 HOH HOH . E 4 HOH A 241 841 201 HOH HOH . E 4 HOH A 242 842 215 HOH HOH . E 4 HOH A 243 843 124 HOH HOH . E 4 HOH A 244 844 19 HOH HOH . E 4 HOH A 245 845 113 HOH HOH . E 4 HOH A 246 846 283 HOH HOH . E 4 HOH A 247 847 129 HOH HOH . E 4 HOH A 248 848 123 HOH HOH . E 4 HOH A 249 849 278 HOH HOH . E 4 HOH A 250 850 117 HOH HOH . E 4 HOH A 251 851 189 HOH HOH . E 4 HOH A 252 852 118 HOH HOH . E 4 HOH A 253 853 47 HOH HOH . E 4 HOH A 254 854 148 HOH HOH . E 4 HOH A 255 855 236 HOH HOH . E 4 HOH A 256 856 108 HOH HOH . E 4 HOH A 257 857 273 HOH HOH . E 4 HOH A 258 858 184 HOH HOH . E 4 HOH A 259 859 247 HOH HOH . E 4 HOH A 260 860 194 HOH HOH . E 4 HOH A 261 861 213 HOH HOH . E 4 HOH A 262 862 176 HOH HOH . E 4 HOH A 263 863 119 HOH HOH . E 4 HOH A 264 864 128 HOH HOH . E 4 HOH A 265 865 243 HOH HOH . E 4 HOH A 266 866 262 HOH HOH . E 4 HOH A 267 867 239 HOH HOH . E 4 HOH A 268 868 269 HOH HOH . E 4 HOH A 269 869 141 HOH HOH . E 4 HOH A 270 870 282 HOH HOH . E 4 HOH A 271 871 265 HOH HOH . E 4 HOH A 272 872 205 HOH HOH . E 4 HOH A 273 873 198 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -22.441 _atom_site.Cartn_y 17.724 _atom_site.Cartn_z 23.85 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #