data_5K1S # _model_server_result.job_id zAOMmUAExVfS4ZyXUgiZAA _model_server_result.datetime_utc '2024-11-25 09:02:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k1s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 5K1S # _exptl.entry_id 5K1S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5K1S _cell.length_a 77.294 _cell.length_b 77.427 _cell.length_c 309.638 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I,J,M,O 1 1 B,D,G,H,K,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 8 A HIS -9 1_555 F ZN ZN . A ZN 402 4_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc2 A SG CYS 57 A CYS 40 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc3 A NE2 HIS 79 A HIS 62 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc4 A SG CYS 109 A CYS 92 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc5 A SG CYS 112 A CYS 95 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc6 A SG CYS 115 A CYS 98 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc7 A SG CYS 123 A CYS 106 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc8 A SG CYS 166 A CYS 149 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc9 B NE2 HIS 8 C HIS -9 1_555 H ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc10 B SG CYS 57 C CYS 40 1_555 H ZN ZN . C ZN 402 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc11 B NE2 HIS 79 C HIS 62 1_555 H ZN ZN . C ZN 402 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc12 B SG CYS 109 C CYS 92 1_555 G ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc13 B SG CYS 112 C CYS 95 1_555 G ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc14 B SG CYS 115 C CYS 98 1_555 G ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc15 B SG CYS 123 C CYS 106 1_555 G ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc16 B SG CYS 166 C CYS 149 1_555 H ZN ZN . C ZN 402 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc17 C SG CYS 57 B CYS 40 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc18 C SG CYS 109 B CYS 92 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc19 C SG CYS 112 B CYS 95 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc20 C SG CYS 115 B CYS 98 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc21 C SG CYS 123 B CYS 106 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc22 C SG CYS 166 B CYS 149 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc23 D SG CYS 57 D CYS 40 1_555 K ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc24 D NE2 HIS 79 D HIS 62 1_555 K ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc25 D OE2 GLU 80 D GLU 63 1_555 K ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc26 D SG CYS 109 D CYS 92 1_555 L ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? metalc ? metalc27 D SG CYS 112 D CYS 95 1_555 L ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc28 D SG CYS 115 D CYS 98 1_555 L ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc29 D SG CYS 123 D CYS 106 1_555 L ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc30 D SG CYS 166 D CYS 149 1_555 K ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5K1S _atom_sites.fract_transf_matrix[1][1] 0.012938 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 401 2 ZN ZN . F 2 ZN A 1 402 4 ZN ZN . G 2 ZN C 1 401 1 ZN ZN . H 2 ZN C 1 402 3 ZN ZN . I 2 ZN B 1 401 6 ZN ZN . J 2 ZN B 1 402 8 ZN ZN . K 2 ZN D 1 401 5 ZN ZN . L 2 ZN D 1 402 7 ZN ZN . M 3 HOH A 1 501 30 HOH HOH . M 3 HOH A 2 502 15 HOH HOH . M 3 HOH A 3 503 75 HOH HOH . M 3 HOH A 4 504 93 HOH HOH . M 3 HOH A 5 505 22 HOH HOH . M 3 HOH A 6 506 21 HOH HOH . M 3 HOH A 7 507 7 HOH HOH . M 3 HOH A 8 508 49 HOH HOH . M 3 HOH A 9 509 5 HOH HOH . M 3 HOH A 10 510 60 HOH HOH . M 3 HOH A 11 511 50 HOH HOH . M 3 HOH A 12 512 63 HOH HOH . M 3 HOH A 13 513 59 HOH HOH . M 3 HOH A 14 514 68 HOH HOH . M 3 HOH A 15 515 12 HOH HOH . M 3 HOH A 16 516 8 HOH HOH . M 3 HOH A 17 517 79 HOH HOH . M 3 HOH A 18 518 77 HOH HOH . M 3 HOH A 19 519 64 HOH HOH . M 3 HOH A 20 520 20 HOH HOH . M 3 HOH A 21 521 94 HOH HOH . M 3 HOH A 22 522 18 HOH HOH . M 3 HOH A 23 523 91 HOH HOH . M 3 HOH A 24 524 96 HOH HOH . M 3 HOH A 25 525 89 HOH HOH . M 3 HOH A 26 526 3 HOH HOH . M 3 HOH A 27 527 19 HOH HOH . M 3 HOH A 28 528 62 HOH HOH . M 3 HOH A 29 529 86 HOH HOH . M 3 HOH A 30 530 98 HOH HOH . M 3 HOH A 31 531 88 HOH HOH . M 3 HOH A 32 532 9 HOH HOH . M 3 HOH A 33 533 38 HOH HOH . M 3 HOH A 34 534 47 HOH HOH . M 3 HOH A 35 535 61 HOH HOH . M 3 HOH A 36 536 10 HOH HOH . M 3 HOH A 37 537 107 HOH HOH . M 3 HOH A 38 538 101 HOH HOH . M 3 HOH A 39 539 35 HOH HOH . M 3 HOH A 40 540 97 HOH HOH . M 3 HOH A 41 541 58 HOH HOH . M 3 HOH A 42 542 87 HOH HOH . N 3 HOH C 1 501 95 HOH HOH . N 3 HOH C 2 502 23 HOH HOH . N 3 HOH C 3 503 66 HOH HOH . N 3 HOH C 4 504 92 HOH HOH . N 3 HOH C 5 505 26 HOH HOH . N 3 HOH C 6 506 41 HOH HOH . N 3 HOH C 7 507 52 HOH HOH . N 3 HOH C 8 508 67 HOH HOH . N 3 HOH C 9 509 42 HOH HOH . N 3 HOH C 10 510 103 HOH HOH . N 3 HOH C 11 511 108 HOH HOH . N 3 HOH C 12 512 82 HOH HOH . N 3 HOH C 13 513 100 HOH HOH . N 3 HOH C 14 514 45 HOH HOH . N 3 HOH C 15 515 99 HOH HOH . N 3 HOH C 16 516 6 HOH HOH . N 3 HOH C 17 517 90 HOH HOH . N 3 HOH C 18 518 13 HOH HOH . N 3 HOH C 19 519 11 HOH HOH . N 3 HOH C 20 520 105 HOH HOH . N 3 HOH C 21 521 17 HOH HOH . N 3 HOH C 22 522 57 HOH HOH . N 3 HOH C 23 523 39 HOH HOH . N 3 HOH C 24 524 83 HOH HOH . N 3 HOH C 25 525 25 HOH HOH . N 3 HOH C 26 526 55 HOH HOH . N 3 HOH C 27 527 109 HOH HOH . N 3 HOH C 28 528 111 HOH HOH . N 3 HOH C 29 529 104 HOH HOH . N 3 HOH C 30 530 44 HOH HOH . N 3 HOH C 31 531 24 HOH HOH . N 3 HOH C 32 532 33 HOH HOH . N 3 HOH C 33 533 43 HOH HOH . N 3 HOH C 34 534 106 HOH HOH . N 3 HOH C 35 535 110 HOH HOH . O 3 HOH B 1 501 48 HOH HOH . O 3 HOH B 2 502 72 HOH HOH . O 3 HOH B 3 503 31 HOH HOH . O 3 HOH B 4 504 54 HOH HOH . O 3 HOH B 5 505 27 HOH HOH . O 3 HOH B 6 506 51 HOH HOH . O 3 HOH B 7 507 71 HOH HOH . O 3 HOH B 8 508 28 HOH HOH . O 3 HOH B 9 509 73 HOH HOH . O 3 HOH B 10 510 46 HOH HOH . O 3 HOH B 11 511 81 HOH HOH . O 3 HOH B 12 512 16 HOH HOH . O 3 HOH B 13 513 70 HOH HOH . O 3 HOH B 14 514 2 HOH HOH . O 3 HOH B 15 515 36 HOH HOH . O 3 HOH B 16 516 78 HOH HOH . O 3 HOH B 17 517 84 HOH HOH . O 3 HOH B 18 518 74 HOH HOH . P 3 HOH D 1 501 1 HOH HOH . P 3 HOH D 2 502 80 HOH HOH . P 3 HOH D 3 503 56 HOH HOH . P 3 HOH D 4 504 76 HOH HOH . P 3 HOH D 5 505 85 HOH HOH . P 3 HOH D 6 506 40 HOH HOH . P 3 HOH D 7 507 69 HOH HOH . P 3 HOH D 8 508 65 HOH HOH . P 3 HOH D 9 509 53 HOH HOH . P 3 HOH D 10 510 4 HOH HOH . P 3 HOH D 11 511 37 HOH HOH . P 3 HOH D 12 512 29 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 16.207 _atom_site.Cartn_y 30.382 _atom_site.Cartn_z 155.99 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #