data_5K20 # _model_server_result.job_id JUkb-C5NW7jUTq7h35xZbw _model_server_result.datetime_utc '2024-12-27 01:16:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k20 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 5K20 # _exptl.entry_id 5K20 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5K20 _cell.length_a 88.757 _cell.length_b 88.757 _cell.length_c 185.141 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K20 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 5K20 _atom_sites.fract_transf_matrix[1][1] 0.011267 _atom_sites.fract_transf_matrix[1][2] 0.006505 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01301 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005401 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FMT A 1 201 2 FMT FMT . F 3 FMT C 1 501 1 FMT FMT . G 3 FMT C 1 502 3 FMT FMT . H 4 HOH A 1 301 30 HOH HOH . H 4 HOH A 2 302 76 HOH HOH . H 4 HOH A 3 303 25 HOH HOH . H 4 HOH A 4 304 15 HOH HOH . H 4 HOH A 5 305 4 HOH HOH . H 4 HOH A 6 306 5 HOH HOH . H 4 HOH A 7 307 72 HOH HOH . H 4 HOH A 8 308 35 HOH HOH . H 4 HOH A 9 309 62 HOH HOH . H 4 HOH A 10 310 20 HOH HOH . H 4 HOH A 11 311 83 HOH HOH . I 4 HOH B 1 401 23 HOH HOH . I 4 HOH B 2 402 74 HOH HOH . I 4 HOH B 3 403 68 HOH HOH . I 4 HOH B 4 404 67 HOH HOH . I 4 HOH B 5 405 60 HOH HOH . I 4 HOH B 6 406 22 HOH HOH . I 4 HOH B 7 407 13 HOH HOH . I 4 HOH B 8 408 24 HOH HOH . I 4 HOH B 9 409 9 HOH HOH . I 4 HOH B 10 410 39 HOH HOH . I 4 HOH B 11 411 37 HOH HOH . I 4 HOH B 12 412 97 HOH HOH . I 4 HOH B 13 413 96 HOH HOH . J 4 HOH C 1 601 21 HOH HOH . J 4 HOH C 2 602 29 HOH HOH . J 4 HOH C 3 603 79 HOH HOH . J 4 HOH C 4 604 10 HOH HOH . J 4 HOH C 5 605 28 HOH HOH . J 4 HOH C 6 606 61 HOH HOH . J 4 HOH C 7 607 56 HOH HOH . J 4 HOH C 8 608 59 HOH HOH . J 4 HOH C 9 609 80 HOH HOH . J 4 HOH C 10 610 70 HOH HOH . J 4 HOH C 11 611 81 HOH HOH . J 4 HOH C 12 612 98 HOH HOH . J 4 HOH C 13 613 94 HOH HOH . J 4 HOH C 14 614 77 HOH HOH . J 4 HOH C 15 615 17 HOH HOH . J 4 HOH C 16 616 11 HOH HOH . J 4 HOH C 17 617 1 HOH HOH . J 4 HOH C 18 618 27 HOH HOH . J 4 HOH C 19 619 47 HOH HOH . J 4 HOH C 20 620 54 HOH HOH . J 4 HOH C 21 621 41 HOH HOH . J 4 HOH C 22 622 14 HOH HOH . J 4 HOH C 23 623 46 HOH HOH . J 4 HOH C 24 624 2 HOH HOH . J 4 HOH C 25 625 19 HOH HOH . J 4 HOH C 26 626 12 HOH HOH . J 4 HOH C 27 627 6 HOH HOH . J 4 HOH C 28 628 42 HOH HOH . J 4 HOH C 29 629 18 HOH HOH . J 4 HOH C 30 630 50 HOH HOH . J 4 HOH C 31 631 33 HOH HOH . J 4 HOH C 32 632 8 HOH HOH . J 4 HOH C 33 633 53 HOH HOH . J 4 HOH C 34 634 32 HOH HOH . J 4 HOH C 35 635 58 HOH HOH . J 4 HOH C 36 636 7 HOH HOH . J 4 HOH C 37 637 16 HOH HOH . J 4 HOH C 38 638 66 HOH HOH . J 4 HOH C 39 639 49 HOH HOH . J 4 HOH C 40 640 44 HOH HOH . J 4 HOH C 41 641 55 HOH HOH . J 4 HOH C 42 642 38 HOH HOH . J 4 HOH C 43 643 88 HOH HOH . J 4 HOH C 44 644 99 HOH HOH . J 4 HOH C 45 645 89 HOH HOH . J 4 HOH C 46 646 36 HOH HOH . J 4 HOH C 47 647 92 HOH HOH . J 4 HOH C 48 648 90 HOH HOH . J 4 HOH C 49 649 40 HOH HOH . J 4 HOH C 50 650 73 HOH HOH . J 4 HOH C 51 651 93 HOH HOH . J 4 HOH C 52 652 63 HOH HOH . J 4 HOH C 53 653 45 HOH HOH . K 4 HOH D 1 701 34 HOH HOH . K 4 HOH D 2 702 31 HOH HOH . K 4 HOH D 3 703 85 HOH HOH . K 4 HOH D 4 704 3 HOH HOH . K 4 HOH D 5 705 69 HOH HOH . K 4 HOH D 6 706 64 HOH HOH . K 4 HOH D 7 707 52 HOH HOH . K 4 HOH D 8 708 71 HOH HOH . K 4 HOH D 9 709 100 HOH HOH . K 4 HOH D 10 710 78 HOH HOH . K 4 HOH D 11 711 57 HOH HOH . K 4 HOH D 12 712 51 HOH HOH . K 4 HOH D 13 713 26 HOH HOH . K 4 HOH D 14 714 48 HOH HOH . K 4 HOH D 15 715 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . E 3 138.227 -36.516 176.132 1 71.12 ? C FMT 201 A 1 HETATM 2 O O1 FMT . . . E 3 137.84 -35.382 175.752 1 65.77 ? O1 FMT 201 A 1 HETATM 3 O O2 FMT . . . E 3 137.955 -37.052 177.347 1 68.06 ? O2 FMT 201 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 3 #