data_5K24 # _model_server_result.job_id PNXKwo-P8gP8QmU857oqXQ _model_server_result.datetime_utc '2024-10-12 23:26:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k24 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 5K24 # _exptl.entry_id 5K24 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.02 _cell.angle_gamma 90 _cell.entry_id 5K24 _cell.length_a 154.222 _cell.length_b 52.119 _cell.length_c 102.855 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K24 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 46 1_555 A SG CYS 121 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 B SG CYS 66 B CYS 46 1_555 B SG CYS 121 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5K24 _atom_sites.fract_transf_matrix[1][1] 0.006484 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001862 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010115 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id FLC _pdbx_nonpoly_scheme.pdb_strand_id D _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id FLC _pdbx_nonpoly_scheme.auth_mon_id FLC _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . E 3 153.561 8.315 -2.357 0.5 139.47 ? CAC FLC 501 D 1 HETATM 2 C CA FLC . . . E 3 154.391 9.142 -1.404 0.5 142.48 ? CA FLC 501 D 1 HETATM 3 C CB FLC . . . E 3 154.223 8.62 0.019 0.5 144.37 ? CB FLC 501 D 1 HETATM 4 C CBC FLC . . . E 3 154.23 7.111 0.004 0.5 143.58 ? CBC FLC 501 D 1 HETATM 5 C CG FLC . . . E 3 155.351 9.127 0.912 0.5 144.35 ? CG FLC 501 D 1 HETATM 6 C CGC FLC . . . E 3 154.859 9.294 2.331 0.5 143.55 ? CGC FLC 501 D 1 HETATM 7 O OA1 FLC . . . E 3 154.112 7.843 -3.375 0.5 136.94 ? OA1 FLC 501 D 1 HETATM 8 O OA2 FLC . . . E 3 152.353 8.135 -2.092 0.5 139.03 ? OA2 FLC 501 D 1 HETATM 9 O OB1 FLC . . . E 3 154.152 6.524 -1.098 0.5 141.21 ? OB1 FLC 501 D 1 HETATM 10 O OB2 FLC . . . E 3 154.313 6.504 1.095 0.5 141.15 ? OB2 FLC 501 D 1 HETATM 11 O OG1 FLC . . . E 3 153.723 8.865 2.627 0.5 142.83 ? OG1 FLC 501 D 1 HETATM 12 O OG2 FLC . . . E 3 155.61 9.856 3.158 0.5 143.63 ? OG2 FLC 501 D 1 HETATM 13 O OHB FLC . . . E 3 152.971 9.082 0.541 0.5 147.3 ? OHB FLC 501 D 1 # _model_server_stats.io_time_ms 77 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 13 #