data_5K2B # _model_server_result.job_id tsnfDFtgZ5i8ScGa199dlA _model_server_result.datetime_utc '2024-11-22 23:18:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k2b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":1215}' # _entry.id 5K2B # _exptl.entry_id 5K2B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5K2B _cell.length_a 40.36 _cell.length_b 180.74 _cell.length_c 142.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K2B _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 N N N ? 7 O N N ? 7 P N N ? 7 Q N N ? 7 R N N ? 7 S N N ? 7 T N N ? 7 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 A OD1 ASP 77 A ASP 52 1_555 C NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc2 A OG SER 116 A SER 91 1_555 C NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc3 C NA NA . A NA 1202 1_555 Y O HOH . A HOH 1327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc4 C NA NA . A NA 1202 1_555 Y O HOH . A HOH 1340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc5 C NA NA . A NA 1202 1_555 Y O HOH . A HOH 1355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 314 n n C1 O2 OLA sing 315 n n C1 C2 OLA sing 316 n n O2 HO2 OLA sing 317 n n C2 C3 OLA sing 318 n n C2 H21 OLA sing 319 n n C2 H22 OLA sing 320 n n C3 C4 OLA sing 321 n n C3 H31 OLA sing 322 n n C3 H32 OLA sing 323 n n C4 C5 OLA sing 324 n n C4 H41 OLA sing 325 n n C4 H42 OLA sing 326 n n C5 C6 OLA sing 327 n n C5 H51 OLA sing 328 n n C5 H52 OLA sing 329 n n C6 C7 OLA sing 330 n n C6 H61 OLA sing 331 n n C6 H62 OLA sing 332 n n C7 C8 OLA sing 333 n n C7 H71 OLA sing 334 n n C7 H72 OLA sing 335 n n C8 C9 OLA sing 336 n n C8 H81 OLA sing 337 n n C8 H82 OLA sing 338 n n C9 C10 OLA doub 339 z n C9 H9 OLA sing 340 n n C10 C11 OLA sing 341 n n C10 H10 OLA sing 342 n n C11 C12 OLA sing 343 n n C11 H111 OLA sing 344 n n C11 H112 OLA sing 345 n n C12 C13 OLA sing 346 n n C12 H121 OLA sing 347 n n C12 H122 OLA sing 348 n n C13 C14 OLA sing 349 n n C13 H131 OLA sing 350 n n C13 H132 OLA sing 351 n n C14 C15 OLA sing 352 n n C14 H141 OLA sing 353 n n C14 H142 OLA sing 354 n n C15 C16 OLA sing 355 n n C15 H151 OLA sing 356 n n C15 H152 OLA sing 357 n n C16 C17 OLA sing 358 n n C16 H161 OLA sing 359 n n C16 H162 OLA sing 360 n n C17 C18 OLA sing 361 n n C17 H171 OLA sing 362 n n C17 H172 OLA sing 363 n n C18 H181 OLA sing 364 n n C18 H182 OLA sing 365 n n C18 H183 OLA sing 366 n n # _atom_sites.entry_id 5K2B _atom_sites.fract_transf_matrix[1][1] 0.024777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007003 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZMA A 1 1201 1 ZMA ZMA . C 3 NA A 1 1202 1 NA NA . D 4 CLR A 1 1203 1 CLR CLR . E 4 CLR A 1 1204 2 CLR CLR . F 4 CLR A 1 1205 3 CLR CLR . G 5 OLB A 1 1206 4 OLB OLB . H 6 OLC A 1 1207 5 OLC OLC . I 6 OLC A 1 1208 13 OLC OLC . J 6 OLC A 1 1209 14 OLC OLC . K 6 OLC A 1 1210 15 OLC OLC . L 6 OLC A 1 1211 25 OLC OLC . M 6 OLC A 1 1212 26 OLC OLC . N 7 OLA A 1 1213 33 OLA OLA . O 7 OLA A 1 1214 45 OLA OLA . P 7 OLA A 1 1215 46 OLA OLA . Q 7 OLA A 1 1216 51 OLA OLA . R 7 OLA A 1 1217 58 OLA OLA . S 7 OLA A 1 1218 60 OLA OLA . T 7 OLA A 1 1219 70 OLA OLA . U 6 OLC A 1 1220 1 OLC OLC . V 6 OLC A 1 1221 2 OLC OLC . W 6 OLC A 1 1222 3 OLC OLC . X 7 OLA A 1 1223 33 OLA OLA . Y 8 HOH A 1 1301 64 HOH HOH . Y 8 HOH A 2 1302 45 HOH HOH . Y 8 HOH A 3 1303 20 HOH HOH . Y 8 HOH A 4 1304 33 HOH HOH . Y 8 HOH A 5 1305 17 HOH HOH . Y 8 HOH A 6 1306 38 HOH HOH . Y 8 HOH A 7 1307 19 HOH HOH . Y 8 HOH A 8 1308 58 HOH HOH . Y 8 HOH A 9 1309 32 HOH HOH . Y 8 HOH A 10 1310 29 HOH HOH . Y 8 HOH A 11 1311 61 HOH HOH . Y 8 HOH A 12 1312 12 HOH HOH . Y 8 HOH A 13 1313 4 HOH HOH . Y 8 HOH A 14 1314 2 HOH HOH . Y 8 HOH A 15 1315 16 HOH HOH . Y 8 HOH A 16 1316 18 HOH HOH . Y 8 HOH A 17 1317 8 HOH HOH . Y 8 HOH A 18 1318 28 HOH HOH . Y 8 HOH A 19 1319 22 HOH HOH . Y 8 HOH A 20 1320 59 HOH HOH . Y 8 HOH A 21 1321 3 HOH HOH . Y 8 HOH A 22 1322 69 HOH HOH . Y 8 HOH A 23 1323 34 HOH HOH . Y 8 HOH A 24 1324 23 HOH HOH . Y 8 HOH A 25 1325 36 HOH HOH . Y 8 HOH A 26 1326 25 HOH HOH . Y 8 HOH A 27 1327 9 HOH HOH . Y 8 HOH A 28 1328 13 HOH HOH . Y 8 HOH A 29 1329 54 HOH HOH . Y 8 HOH A 30 1330 10 HOH HOH . Y 8 HOH A 31 1331 39 HOH HOH . Y 8 HOH A 32 1332 6 HOH HOH . Y 8 HOH A 33 1333 35 HOH HOH . Y 8 HOH A 34 1334 40 HOH HOH . Y 8 HOH A 35 1335 42 HOH HOH . Y 8 HOH A 36 1336 1 HOH HOH . Y 8 HOH A 37 1337 24 HOH HOH . Y 8 HOH A 38 1338 11 HOH HOH . Y 8 HOH A 39 1339 65 HOH HOH . Y 8 HOH A 40 1340 37 HOH HOH . Y 8 HOH A 41 1341 30 HOH HOH . Y 8 HOH A 42 1342 21 HOH HOH . Y 8 HOH A 43 1343 14 HOH HOH . Y 8 HOH A 44 1344 26 HOH HOH . Y 8 HOH A 45 1345 7 HOH HOH . Y 8 HOH A 46 1346 43 HOH HOH . Y 8 HOH A 47 1347 51 HOH HOH . Y 8 HOH A 48 1348 49 HOH HOH . Y 8 HOH A 49 1349 67 HOH HOH . Y 8 HOH A 50 1350 63 HOH HOH . Y 8 HOH A 51 1351 57 HOH HOH . Y 8 HOH A 52 1352 5 HOH HOH . Y 8 HOH A 53 1353 46 HOH HOH . Y 8 HOH A 54 1354 74 HOH HOH . Y 8 HOH A 55 1355 15 HOH HOH . Y 8 HOH A 56 1356 27 HOH HOH . Y 8 HOH A 57 1357 41 HOH HOH . Y 8 HOH A 58 1358 75 HOH HOH . Y 8 HOH A 59 1359 71 HOH HOH . Y 8 HOH A 60 1360 44 HOH HOH . Y 8 HOH A 61 1361 31 HOH HOH . Y 8 HOH A 62 1362 72 HOH HOH . Y 8 HOH A 63 1363 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . P 7 20.377 165.663 4.46 1 86.52 ? C1 OLA 1215 A 1 HETATM 2 O O1 OLA . . . P 7 19.139 165.502 4.415 1 93.79 ? O1 OLA 1215 A 1 HETATM 3 O O2 OLA . . . P 7 20.98 165.437 5.532 1 89.37 ? O2 OLA 1215 A 1 HETATM 4 C C2 OLA . . . P 7 21.14 166.122 3.242 1 75.07 ? C2 OLA 1215 A 1 HETATM 5 C C3 OLA . . . P 7 20.378 167.233 2.529 1 69.07 ? C3 OLA 1215 A 1 HETATM 6 C C4 OLA . . . P 7 21.025 167.514 1.179 1 69.41 ? C4 OLA 1215 A 1 HETATM 7 C C5 OLA . . . P 7 20.872 168.975 0.775 1 53.75 ? C5 OLA 1215 A 1 HETATM 8 C C6 OLA . . . P 7 21.535 169.209 -0.577 1 60.76 ? C6 OLA 1215 A 1 HETATM 9 C C7 OLA . . . P 7 20.653 170.042 -1.499 1 74.54 ? C7 OLA 1215 A 1 HETATM 10 C C8 OLA . . . P 7 21.309 171.386 -1.792 1 67.42 ? C8 OLA 1215 A 1 HETATM 11 C C9 OLA . . . P 7 21.75 171.428 -3.236 1 62.84 ? C9 OLA 1215 A 1 HETATM 12 C C10 OLA . . . P 7 22.054 172.592 -3.801 1 63.16 ? C10 OLA 1215 A 1 HETATM 13 C C11 OLA . . . P 7 21.975 173.874 -3.006 1 52.36 ? C11 OLA 1215 A 1 HETATM 14 C C12 OLA . . . P 7 23.302 174.617 -3.113 1 50.4 ? C12 OLA 1215 A 1 HETATM 15 C C13 OLA . . . P 7 23.397 175.709 -2.054 1 46.25 ? C13 OLA 1215 A 1 HETATM 16 C C14 OLA . . . P 7 24.33 176.828 -2.498 1 41.86 ? C14 OLA 1215 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #