data_5K2C # _model_server_result.job_id 4JQK3Vd5wOIU5zcn1P3C2Q _model_server_result.datetime_utc '2024-11-05 11:31:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k2c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":1226}' # _entry.id 5K2C # _exptl.entry_id 5K2C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5K2C _cell.length_a 40.36 _cell.length_b 180.74 _cell.length_c 142.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K2C _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id AA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A OD1 ASP 77 A ASP 52 1_555 C NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc2 A OG SER 116 A SER 91 1_555 C NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc3 C NA NA . A NA 1202 1_555 CA O HOH . A HOH 1332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc4 C NA NA . A NA 1202 1_555 CA O HOH . A HOH 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc5 C NA NA . A NA 1202 1_555 CA O HOH . A HOH 1381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5K2C _atom_sites.fract_transf_matrix[1][1] 0.024777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007003 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZMA A 1 1201 1 ZMA ZMA . C 3 NA A 1 1202 2 NA NA . D 4 CLR A 1 1203 3 CLR CLR . E 4 CLR A 1 1204 4 CLR CLR . F 4 CLR A 1 1205 5 CLR CLR . G 5 OLC A 1 1206 11 OLC OLC . H 5 OLC A 1 1207 12 OLC OLC . I 5 OLC A 1 1208 13 OLC OLC . J 5 OLC A 1 1209 14 OLC OLC . K 5 OLC A 1 1210 15 OLC OLC . L 5 OLC A 1 1211 16 OLC OLC . M 5 OLC A 1 1212 17 OLC OLC . N 5 OLC A 1 1213 18 OLC OLC . O 5 OLC A 1 1214 19 OLC OLC . P 6 OLA A 1 1215 25 OLA OLA . Q 6 OLA A 1 1216 26 OLA OLA . R 6 OLA A 1 1217 27 OLA OLA . S 6 OLA A 1 1218 28 OLA OLA . T 6 OLA A 1 1219 30 OLA OLA . U 6 OLA A 1 1220 31 OLA OLA . V 6 OLA A 1 1221 32 OLA OLA . W 6 OLA A 1 1222 33 OLA OLA . X 6 OLA A 1 1223 35 OLA OLA . Y 6 OLA A 1 1224 38 OLA OLA . Z 6 OLA A 1 1225 41 OLA OLA . AA 7 PEG A 1 1226 49 PEG PEG . BA 5 OLC A 1 1227 1 OLC OLC . CA 8 HOH A 1 1301 101 HOH HOH . CA 8 HOH A 2 1302 104 HOH HOH . CA 8 HOH A 3 1303 96 HOH HOH . CA 8 HOH A 4 1304 98 HOH HOH . CA 8 HOH A 5 1305 83 HOH HOH . CA 8 HOH A 6 1306 4 HOH HOH . CA 8 HOH A 7 1307 1 HOH HOH . CA 8 HOH A 8 1308 43 HOH HOH . CA 8 HOH A 9 1309 67 HOH HOH . CA 8 HOH A 10 1310 11 HOH HOH . CA 8 HOH A 11 1311 3 HOH HOH . CA 8 HOH A 12 1312 27 HOH HOH . CA 8 HOH A 13 1313 7 HOH HOH . CA 8 HOH A 14 1314 6 HOH HOH . CA 8 HOH A 15 1315 24 HOH HOH . CA 8 HOH A 16 1316 44 HOH HOH . CA 8 HOH A 17 1317 31 HOH HOH . CA 8 HOH A 18 1318 39 HOH HOH . CA 8 HOH A 19 1319 47 HOH HOH . CA 8 HOH A 20 1320 53 HOH HOH . CA 8 HOH A 21 1321 15 HOH HOH . CA 8 HOH A 22 1322 42 HOH HOH . CA 8 HOH A 23 1323 105 HOH HOH . CA 8 HOH A 24 1324 2 HOH HOH . CA 8 HOH A 25 1325 13 HOH HOH . CA 8 HOH A 26 1326 115 HOH HOH . CA 8 HOH A 27 1327 14 HOH HOH . CA 8 HOH A 28 1328 10 HOH HOH . CA 8 HOH A 29 1329 93 HOH HOH . CA 8 HOH A 30 1330 23 HOH HOH . CA 8 HOH A 31 1331 51 HOH HOH . CA 8 HOH A 32 1332 33 HOH HOH . CA 8 HOH A 33 1333 106 HOH HOH . CA 8 HOH A 34 1334 57 HOH HOH . CA 8 HOH A 35 1335 20 HOH HOH . CA 8 HOH A 36 1336 8 HOH HOH . CA 8 HOH A 37 1337 71 HOH HOH . CA 8 HOH A 38 1338 92 HOH HOH . CA 8 HOH A 39 1339 19 HOH HOH . CA 8 HOH A 40 1340 62 HOH HOH . CA 8 HOH A 41 1341 37 HOH HOH . CA 8 HOH A 42 1342 28 HOH HOH . CA 8 HOH A 43 1343 41 HOH HOH . CA 8 HOH A 44 1344 103 HOH HOH . CA 8 HOH A 45 1345 56 HOH HOH . CA 8 HOH A 46 1346 5 HOH HOH . CA 8 HOH A 47 1347 25 HOH HOH . CA 8 HOH A 48 1348 12 HOH HOH . CA 8 HOH A 49 1349 38 HOH HOH . CA 8 HOH A 50 1350 34 HOH HOH . CA 8 HOH A 51 1351 91 HOH HOH . CA 8 HOH A 52 1352 69 HOH HOH . CA 8 HOH A 53 1353 68 HOH HOH . CA 8 HOH A 54 1354 107 HOH HOH . CA 8 HOH A 55 1355 22 HOH HOH . CA 8 HOH A 56 1356 73 HOH HOH . CA 8 HOH A 57 1357 112 HOH HOH . CA 8 HOH A 58 1358 9 HOH HOH . CA 8 HOH A 59 1359 61 HOH HOH . CA 8 HOH A 60 1360 86 HOH HOH . CA 8 HOH A 61 1361 113 HOH HOH . CA 8 HOH A 62 1362 30 HOH HOH . CA 8 HOH A 63 1363 76 HOH HOH . CA 8 HOH A 64 1364 111 HOH HOH . CA 8 HOH A 65 1365 36 HOH HOH . CA 8 HOH A 66 1366 110 HOH HOH . CA 8 HOH A 67 1367 60 HOH HOH . CA 8 HOH A 68 1368 102 HOH HOH . CA 8 HOH A 69 1369 100 HOH HOH . CA 8 HOH A 70 1370 78 HOH HOH . CA 8 HOH A 71 1371 88 HOH HOH . CA 8 HOH A 72 1372 97 HOH HOH . CA 8 HOH A 73 1373 95 HOH HOH . CA 8 HOH A 74 1374 85 HOH HOH . CA 8 HOH A 75 1375 18 HOH HOH . CA 8 HOH A 76 1376 35 HOH HOH . CA 8 HOH A 77 1377 21 HOH HOH . CA 8 HOH A 78 1378 99 HOH HOH . CA 8 HOH A 79 1379 16 HOH HOH . CA 8 HOH A 80 1380 74 HOH HOH . CA 8 HOH A 81 1381 46 HOH HOH . CA 8 HOH A 82 1382 40 HOH HOH . CA 8 HOH A 83 1383 70 HOH HOH . CA 8 HOH A 84 1384 81 HOH HOH . CA 8 HOH A 85 1385 109 HOH HOH . CA 8 HOH A 86 1386 64 HOH HOH . CA 8 HOH A 87 1387 84 HOH HOH . CA 8 HOH A 88 1388 65 HOH HOH . CA 8 HOH A 89 1389 72 HOH HOH . CA 8 HOH A 90 1390 29 HOH HOH . CA 8 HOH A 91 1391 59 HOH HOH . CA 8 HOH A 92 1392 116 HOH HOH . CA 8 HOH A 93 1393 55 HOH HOH . CA 8 HOH A 94 1394 26 HOH HOH . CA 8 HOH A 95 1395 117 HOH HOH . CA 8 HOH A 96 1396 108 HOH HOH . CA 8 HOH A 97 1397 80 HOH HOH . CA 8 HOH A 98 1398 120 HOH HOH . CA 8 HOH A 99 1399 118 HOH HOH . CA 8 HOH A 100 1400 119 HOH HOH . CA 8 HOH A 101 1401 94 HOH HOH . CA 8 HOH A 102 1402 52 HOH HOH . CA 8 HOH A 103 1403 58 HOH HOH . CA 8 HOH A 104 1404 114 HOH HOH . CA 8 HOH A 105 1405 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . AA 7 5.091 69.283 35.862 1 94.24 ? C1 PEG 1226 A 1 HETATM 2 O O1 PEG . . . AA 7 5.4 70.537 35.245 1 95.68 ? O1 PEG 1226 A 1 HETATM 3 C C2 PEG . . . AA 7 6.285 68.819 36.686 1 94.52 ? C2 PEG 1226 A 1 HETATM 4 O O2 PEG . . . AA 7 7.415 68.643 35.834 1 95.85 ? O2 PEG 1226 A 1 HETATM 5 C C3 PEG . . . AA 7 8.58 68.304 36.576 1 97.41 ? C3 PEG 1226 A 1 HETATM 6 C C4 PEG . . . AA 7 9.623 67.717 35.64 1 99.2 ? C4 PEG 1226 A 1 HETATM 7 O O4 PEG . . . AA 7 10.902 67.839 36.265 1 101.24 ? O4 PEG 1226 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 7 #