data_5K3Q
#
_model_server_result.job_id            VG0DV4p4bDE-GbAqwQuW6A 
_model_server_result.datetime_utc      '2024-10-18 21:28:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5k3q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    5K3Q 
#
_exptl.entry_id    5K3Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.03 
_cell.angle_gamma         90 
_cell.entry_id            5K3Q 
_cell.length_a            30.751 
_cell.length_b            54.556 
_cell.length_c            54.479 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5K3Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,N,O 1 1 
C,D,J,K,L,M,P,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 7 A CYS 97 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc2 A ND1 HIS 10 A HIS 100 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc3 A SG CYS 18 A CYS 108 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc4 A OD2 ASP 21 A ASP 111 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc5 A SG CYS 26 A CYS 116 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc6 A SG CYS 29 A CYS 119 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc7 A ND1 HIS 35 A HIS 125 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? 
metalc ? metalc8 A ND1 HIS 38 A HIS 128 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc9 B SG CYS 7 B CYS 97 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc10 B ND1 HIS 10 B HIS 100 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc11 B SG CYS 18 B CYS 108 1_555 H ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc12 B OD2 ASP 21 B ASP 111 1_555 H ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc13 B SG CYS 26 B CYS 116 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
metalc ? metalc14 B SG CYS 29 B CYS 119 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc15 B ND1 HIS 35 B HIS 125 1_555 H ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc16 B ND1 HIS 38 B HIS 128 1_555 H ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc17 C SG CYS 7 C CYS 97 1_555 K ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc18 C ND1 HIS 10 C HIS 100 1_555 K ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc19 C SG CYS 18 C CYS 108 1_555 J ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc20 C OD2 ASP 21 C ASP 111 1_555 J ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc21 C SG CYS 26 C CYS 116 1_555 K ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc22 C SG CYS 29 C CYS 119 1_555 K ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc23 C ND1 HIS 35 C HIS 125 1_555 J ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc24 C ND1 HIS 38 C HIS 128 1_555 J ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc25 D SG CYS 7 D CYS 97 1_555 M ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc26 D ND1 HIS 10 D HIS 100 1_555 M ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc27 D SG CYS 18 D CYS 108 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc28 D OD2 ASP 21 D ASP 111 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc29 D SG CYS 26 D CYS 116 1_555 M ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc30 D SG CYS 29 D CYS 119 1_555 M ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc31 D ND1 HIS 35 D HIS 125 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc32 D ND1 HIS 38 D HIS 128 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5K3Q 
_atom_sites.fract_transf_matrix[1][1]    0.032519 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005754 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01833 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018641 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN A 1 201 4 ZN ZN . 
F 2 ZN A 1 202 5 ZN ZN . 
G 2 ZN B 1 201 6 ZN ZN . 
H 2 ZN B 1 202 7 ZN ZN . 
I 3 NO3 B 1 203 1 NO3 NO3 . 
J 2 ZN C 1 201 2 ZN ZN . 
K 2 ZN C 1 202 8 ZN ZN . 
L 2 ZN D 1 201 1 ZN ZN . 
M 2 ZN D 1 202 3 ZN ZN . 
N 4 HOH A 1 301 75 HOH HOH . 
N 4 HOH A 2 302 124 HOH HOH . 
N 4 HOH A 3 303 24 HOH HOH . 
N 4 HOH A 4 304 130 HOH HOH . 
N 4 HOH A 5 305 126 HOH HOH . 
N 4 HOH A 6 306 127 HOH HOH . 
N 4 HOH A 7 307 78 HOH HOH . 
N 4 HOH A 8 308 18 HOH HOH . 
N 4 HOH A 9 309 87 HOH HOH . 
N 4 HOH A 10 310 73 HOH HOH . 
N 4 HOH A 11 311 123 HOH HOH . 
N 4 HOH A 12 312 125 HOH HOH . 
N 4 HOH A 13 313 40 HOH HOH . 
N 4 HOH A 14 314 122 HOH HOH . 
N 4 HOH A 15 315 26 HOH HOH . 
N 4 HOH A 16 316 45 HOH HOH . 
N 4 HOH A 17 317 71 HOH HOH . 
O 4 HOH B 1 301 44 HOH HOH . 
O 4 HOH B 2 302 74 HOH HOH . 
O 4 HOH B 3 303 138 HOH HOH . 
O 4 HOH B 4 304 9 HOH HOH . 
O 4 HOH B 5 305 146 HOH HOH . 
O 4 HOH B 6 306 22 HOH HOH . 
O 4 HOH B 7 307 50 HOH HOH . 
O 4 HOH B 8 308 13 HOH HOH . 
O 4 HOH B 9 309 42 HOH HOH . 
O 4 HOH B 10 310 33 HOH HOH . 
O 4 HOH B 11 311 64 HOH HOH . 
O 4 HOH B 12 312 37 HOH HOH . 
O 4 HOH B 13 313 51 HOH HOH . 
O 4 HOH B 14 314 19 HOH HOH . 
O 4 HOH B 15 315 10 HOH HOH . 
O 4 HOH B 16 316 12 HOH HOH . 
O 4 HOH B 17 317 2 HOH HOH . 
O 4 HOH B 18 318 128 HOH HOH . 
O 4 HOH B 19 319 31 HOH HOH . 
O 4 HOH B 20 320 129 HOH HOH . 
O 4 HOH B 21 321 1 HOH HOH . 
O 4 HOH B 22 322 120 HOH HOH . 
O 4 HOH B 23 323 11 HOH HOH . 
O 4 HOH B 24 324 104 HOH HOH . 
O 4 HOH B 25 325 119 HOH HOH . 
P 4 HOH C 1 301 132 HOH HOH . 
P 4 HOH C 2 302 135 HOH HOH . 
P 4 HOH C 3 303 133 HOH HOH . 
P 4 HOH C 4 304 136 HOH HOH . 
P 4 HOH C 5 305 140 HOH HOH . 
P 4 HOH C 6 306 141 HOH HOH . 
P 4 HOH C 7 307 32 HOH HOH . 
P 4 HOH C 8 308 121 HOH HOH . 
P 4 HOH C 9 309 98 HOH HOH . 
Q 4 HOH D 1 301 59 HOH HOH . 
Q 4 HOH D 2 302 15 HOH HOH . 
Q 4 HOH D 3 303 131 HOH HOH . 
Q 4 HOH D 4 304 134 HOH HOH . 
Q 4 HOH D 5 305 36 HOH HOH . 
Q 4 HOH D 6 306 66 HOH HOH . 
Q 4 HOH D 7 307 55 HOH HOH . 
Q 4 HOH D 8 308 27 HOH HOH . 
Q 4 HOH D 9 309 17 HOH HOH . 
Q 4 HOH D 10 310 58 HOH HOH . 
Q 4 HOH D 11 311 6 HOH HOH . 
Q 4 HOH D 12 312 5 HOH HOH . 
Q 4 HOH D 13 313 7 HOH HOH . 
Q 4 HOH D 14 314 4 HOH HOH . 
Q 4 HOH D 15 315 137 HOH HOH . 
Q 4 HOH D 16 316 103 HOH HOH . 
Q 4 HOH D 17 317 8 HOH HOH . 
Q 4 HOH D 18 318 147 HOH HOH . 
Q 4 HOH D 19 319 143 HOH HOH . 
Q 4 HOH D 20 320 23 HOH HOH . 
Q 4 HOH D 21 321 21 HOH HOH . 
Q 4 HOH D 22 322 145 HOH HOH . 
Q 4 HOH D 23 323 14 HOH HOH . 
Q 4 HOH D 24 324 16 HOH HOH . 
Q 4 HOH D 25 325 144 HOH HOH . 
Q 4 HOH D 26 326 81 HOH HOH . 
Q 4 HOH D 27 327 47 HOH HOH . 
Q 4 HOH D 28 328 72 HOH HOH . 
Q 4 HOH D 29 329 142 HOH HOH . 
Q 4 HOH D 30 330 3 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               35.93 
_atom_site.Cartn_y               -0.15 
_atom_site.Cartn_z               26.457 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        29.68 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           1 
#