data_5K53 # _model_server_result.job_id QAL6FVDQ7UoySbRuwiCnUA _model_server_result.datetime_utc '2024-12-04 10:55:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k53 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":502}' # _entry.id 5K53 # _exptl.entry_id 5K53 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 284.477 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'STEARIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5K53 _cell.length_a 55.012 _cell.length_b 78.265 _cell.length_c 108.861 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K53 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 64 A GLU 32 1_555 C FE FE . A FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc2 A OE1 GLU 92 A GLU 60 1_555 C FE FE . A FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc3 A OE2 GLU 92 A GLU 60 1_555 D FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc4 A ND1 HIS 95 A HIS 63 1_555 C FE FE . A FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc5 A OE1 GLU 147 A GLU 115 1_555 D FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc6 A OE2 GLU 147 A GLU 115 1_555 D FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc7 A OE1 GLU 176 A GLU 144 1_555 C FE FE . A FE 500 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc8 A OE2 GLU 176 A GLU 144 1_555 C FE FE . A FE 500 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc9 A OE1 GLU 176 A GLU 144 1_555 D FE FE . A FE 501 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc10 A ND1 HIS 179 A HIS 147 1_555 D FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc11 D FE FE . A FE 501 1_555 E O1 STE . A STE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc12 B OE1 GLU 64 B GLU 32 1_555 G FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? metalc ? metalc13 B OE2 GLU 92 B GLU 60 1_555 F FE FE . B FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc14 B OE1 GLU 92 B GLU 60 1_555 G FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc15 B ND1 HIS 95 B HIS 63 1_555 G FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc16 B OE1 GLU 147 B GLU 115 1_555 F FE FE . B FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc17 B OE2 GLU 147 B GLU 115 1_555 F FE FE . B FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc18 B OE2 GLU 176 B GLU 144 1_555 F FE FE . B FE 500 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc19 B OE1 GLU 176 B GLU 144 1_555 G FE FE . B FE 501 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc20 B OE2 GLU 176 B GLU 144 1_555 G FE FE . B FE 501 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc21 B ND1 HIS 179 B HIS 147 1_555 F FE FE . B FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc22 F FE FE . B FE 500 1_555 H O1 STE . B STE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? # _chem_comp.formula 'C18 H36 O2' _chem_comp.formula_weight 284.477 _chem_comp.id STE _chem_comp.mon_nstd_flag . _chem_comp.name 'STEARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 STE doub 290 n n C1 O2 STE sing 291 n n C1 C2 STE sing 292 n n O2 HO2 STE sing 293 n n C2 C3 STE sing 294 n n C2 H21 STE sing 295 n n C2 H22 STE sing 296 n n C3 C4 STE sing 297 n n C3 H31 STE sing 298 n n C3 H32 STE sing 299 n n C4 C5 STE sing 300 n n C4 H41 STE sing 301 n n C4 H42 STE sing 302 n n C5 C6 STE sing 303 n n C5 H51 STE sing 304 n n C5 H52 STE sing 305 n n C6 C7 STE sing 306 n n C6 H61 STE sing 307 n n C6 H62 STE sing 308 n n C7 C8 STE sing 309 n n C7 H71 STE sing 310 n n C7 H72 STE sing 311 n n C8 C9 STE sing 312 n n C8 H81 STE sing 313 n n C8 H82 STE sing 314 n n C9 C10 STE sing 315 n n C9 H91 STE sing 316 n n C9 H92 STE sing 317 n n C10 C11 STE sing 318 n n C10 H101 STE sing 319 n n C10 H102 STE sing 320 n n C11 C12 STE sing 321 n n C11 H111 STE sing 322 n n C11 H112 STE sing 323 n n C12 C13 STE sing 324 n n C12 H121 STE sing 325 n n C12 H122 STE sing 326 n n C13 C14 STE sing 327 n n C13 H131 STE sing 328 n n C13 H132 STE sing 329 n n C14 C15 STE sing 330 n n C14 H141 STE sing 331 n n C14 H142 STE sing 332 n n C15 C16 STE sing 333 n n C15 H151 STE sing 334 n n C15 H152 STE sing 335 n n C16 C17 STE sing 336 n n C16 H161 STE sing 337 n n C16 H162 STE sing 338 n n C17 C18 STE sing 339 n n C17 H171 STE sing 340 n n C17 H172 STE sing 341 n n C18 H181 STE sing 342 n n C18 H182 STE sing 343 n n C18 H183 STE sing 344 n n # _atom_sites.entry_id 5K53 _atom_sites.fract_transf_matrix[1][1] 0.018178 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012777 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009186 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE A 1 500 500 FE FE . D 2 FE A 1 501 501 FE FE . E 3 STE A 1 502 502 STE OCT . F 2 FE B 1 500 500 FE FE . G 2 FE B 1 501 501 FE FE . H 3 STE B 1 502 502 STE OCT . I 4 HOH A 1 601 98 HOH HOH . I 4 HOH A 2 602 45 HOH HOH . I 4 HOH A 3 603 3 HOH HOH . I 4 HOH A 4 604 41 HOH HOH . I 4 HOH A 5 605 58 HOH HOH . I 4 HOH A 6 606 11 HOH HOH . I 4 HOH A 7 607 82 HOH HOH . I 4 HOH A 8 608 2 HOH HOH . I 4 HOH A 9 609 59 HOH HOH . I 4 HOH A 10 610 64 HOH HOH . I 4 HOH A 11 611 48 HOH HOH . I 4 HOH A 12 612 24 HOH HOH . I 4 HOH A 13 613 79 HOH HOH . I 4 HOH A 14 614 28 HOH HOH . I 4 HOH A 15 615 39 HOH HOH . I 4 HOH A 16 616 18 HOH HOH . I 4 HOH A 17 617 61 HOH HOH . I 4 HOH A 18 618 43 HOH HOH . I 4 HOH A 19 619 42 HOH HOH . I 4 HOH A 20 620 40 HOH HOH . I 4 HOH A 21 621 71 HOH HOH . I 4 HOH A 22 622 27 HOH HOH . I 4 HOH A 23 623 13 HOH HOH . I 4 HOH A 24 624 35 HOH HOH . I 4 HOH A 25 625 49 HOH HOH . I 4 HOH A 26 626 72 HOH HOH . I 4 HOH A 27 627 12 HOH HOH . I 4 HOH A 28 628 63 HOH HOH . I 4 HOH A 29 629 38 HOH HOH . I 4 HOH A 30 630 4 HOH HOH . I 4 HOH A 31 631 46 HOH HOH . I 4 HOH A 32 632 5 HOH HOH . I 4 HOH A 33 633 22 HOH HOH . I 4 HOH A 34 634 78 HOH HOH . I 4 HOH A 35 635 17 HOH HOH . I 4 HOH A 36 636 74 HOH HOH . I 4 HOH A 37 637 37 HOH HOH . I 4 HOH A 38 638 14 HOH HOH . I 4 HOH A 39 639 80 HOH HOH . I 4 HOH A 40 640 65 HOH HOH . I 4 HOH A 41 641 75 HOH HOH . I 4 HOH A 42 642 1 HOH HOH . I 4 HOH A 43 643 29 HOH HOH . I 4 HOH A 44 644 44 HOH HOH . I 4 HOH A 45 645 62 HOH HOH . I 4 HOH A 46 646 15 HOH HOH . I 4 HOH A 47 647 16 HOH HOH . I 4 HOH A 48 648 77 HOH HOH . I 4 HOH A 49 649 81 HOH HOH . I 4 HOH A 50 650 76 HOH HOH . I 4 HOH A 51 651 55 HOH HOH . I 4 HOH A 52 652 36 HOH HOH . I 4 HOH A 53 653 60 HOH HOH . I 4 HOH A 54 654 90 HOH HOH . J 4 HOH B 1 601 68 HOH HOH . J 4 HOH B 2 602 85 HOH HOH . J 4 HOH B 3 603 51 HOH HOH . J 4 HOH B 4 604 54 HOH HOH . J 4 HOH B 5 605 10 HOH HOH . J 4 HOH B 6 606 52 HOH HOH . J 4 HOH B 7 607 21 HOH HOH . J 4 HOH B 8 608 95 HOH HOH . J 4 HOH B 9 609 26 HOH HOH . J 4 HOH B 10 610 94 HOH HOH . J 4 HOH B 11 611 84 HOH HOH . J 4 HOH B 12 612 34 HOH HOH . J 4 HOH B 13 613 23 HOH HOH . J 4 HOH B 14 614 93 HOH HOH . J 4 HOH B 15 615 19 HOH HOH . J 4 HOH B 16 616 57 HOH HOH . J 4 HOH B 17 617 100 HOH HOH . J 4 HOH B 18 618 31 HOH HOH . J 4 HOH B 19 619 86 HOH HOH . J 4 HOH B 20 620 70 HOH HOH . J 4 HOH B 21 621 99 HOH HOH . J 4 HOH B 22 622 87 HOH HOH . J 4 HOH B 23 623 32 HOH HOH . J 4 HOH B 24 624 89 HOH HOH . J 4 HOH B 25 625 88 HOH HOH . J 4 HOH B 26 626 97 HOH HOH . J 4 HOH B 27 627 8 HOH HOH . J 4 HOH B 28 628 9 HOH HOH . J 4 HOH B 29 629 83 HOH HOH . J 4 HOH B 30 630 53 HOH HOH . J 4 HOH B 31 631 20 HOH HOH . J 4 HOH B 32 632 91 HOH HOH . J 4 HOH B 33 633 25 HOH HOH . J 4 HOH B 34 634 56 HOH HOH . J 4 HOH B 35 635 103 HOH HOH . J 4 HOH B 36 636 30 HOH HOH . J 4 HOH B 37 637 67 HOH HOH . J 4 HOH B 38 638 105 HOH HOH . J 4 HOH B 39 639 69 HOH HOH . J 4 HOH B 40 640 66 HOH HOH . J 4 HOH B 41 641 50 HOH HOH . J 4 HOH B 42 642 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 STE . . . H 3 -35.227 -0.384 135.793 1 33.26 ? C1 STE 502 B 1 HETATM 2 O O1 STE . . . H 3 -35.337 -1.478 135.233 1 35.16 ? O1 STE 502 B 1 HETATM 3 C C2 STE . . . H 3 -34.433 -0.255 136.952 1 50.46 ? C2 STE 502 B 1 HETATM 4 C C3 STE . . . H 3 -34.832 -1.322 137.947 1 44.1 ? C3 STE 502 B 1 HETATM 5 C C4 STE . . . H 3 -34.904 -0.603 139.269 1 46.24 ? C4 STE 502 B 1 HETATM 6 C C5 STE . . . H 3 -34.876 -1.557 140.418 1 43.56 ? C5 STE 502 B 1 HETATM 7 C C6 STE . . . H 3 -35.122 -0.773 141.721 1 50.98 ? C6 STE 502 B 1 HETATM 8 C C7 STE . . . H 3 -35.969 -1.532 142.769 1 52.07 ? C7 STE 502 B 1 HETATM 9 C C8 STE . . . H 3 -36.474 -0.503 143.786 1 58.86 ? C8 STE 502 B 1 HETATM 10 C C9 STE . . . H 3 -37.18 -1.115 145.027 1 65.27 ? C9 STE 502 B 1 HETATM 11 C C10 STE . . . H 3 -36.936 -0.253 146.297 1 64.41 ? C10 STE 502 B 1 HETATM 12 C C11 STE . . . H 3 -38.195 0.153 147.105 1 59.84 ? C11 STE 502 B 1 HETATM 13 C C12 STE . . . H 3 -39.058 1.151 146.36 1 62.76 ? C12 STE 502 B 1 HETATM 14 C C13 STE . . . H 3 -38.562 2.563 146.401 1 58.55 ? C13 STE 502 B 1 HETATM 15 C C14 STE . . . H 3 -39.57 3.534 145.841 1 48.46 ? C14 STE 502 B 1 HETATM 16 C C15 STE . . . H 3 -38.952 4.583 144.888 1 43.14 ? C15 STE 502 B 1 HETATM 17 C C16 STE . . . H 3 -37.939 5.538 145.519 1 49.03 ? C16 STE 502 B 1 HETATM 18 C C17 STE . . . H 3 -37.43 6.513 144.439 1 48.39 ? C17 STE 502 B 1 HETATM 19 C C18 STE . . . H 3 -36.312 7.454 145.011 1 40.22 ? C18 STE 502 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 390 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #