data_5K6Q # _model_server_result.job_id F3zVBz42_fYEDbx-PhPZvg _model_server_result.datetime_utc '2024-10-18 23:35:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k6q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 5K6Q # _exptl.entry_id 5K6Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.29 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5K6Q _cell.length_a 178.934 _cell.length_b 178.934 _cell.length_c 186.086 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K6Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,2,3,4 A,B,C,D,E,F 2 1,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 89.467 -154.96139 0 3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -62.028667 4 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 89.467 -154.96139 -62.028667 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 254 A PRO 339 1_555 A N CSD 255 A CSD 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C CSD 255 A CSD 340 1_555 A N ASP 256 A ASP 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OD1 ASP 453 A ASP 538 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc2 A OD1 ASN 480 A ASN 565 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc3 A O HIS 482 A HIS 567 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc4 B MG MG . A MG 701 1_555 E O2A TDM . A TDM 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc5 B MG MG . A MG 701 1_555 E O2B TDM . A TDM 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc6 B MG MG . A MG 701 1_555 F O HOH . A HOH 876 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? # _chem_comp.formula 'C8 H17 N O3 S' _chem_comp.formula_weight 207.29 _chem_comp.id NHE _chem_comp.mon_nstd_flag . _chem_comp.name '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-CYCLOHEXYLTAURINE;CHES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3' C2' NHE sing 343 n n C3' C4' NHE sing 344 n n C3' "H3'1" NHE sing 345 n n C3' "H3'2" NHE sing 346 n n C2' C1' NHE sing 347 n n C2' "H2'1" NHE sing 348 n n C2' "H2'2" NHE sing 349 n n C1' C6' NHE sing 350 n n C1' N NHE sing 351 n n C1' "HC'1" NHE sing 352 n n C6' C5' NHE sing 353 n n C6' "H6'1" NHE sing 354 n n C6' "H6'2" NHE sing 355 n n N C1 NHE sing 356 n n N HN NHE sing 357 n n C1 C2 NHE sing 358 n n C1 HC11 NHE sing 359 n n C1 HC12 NHE sing 360 n n C2 S NHE sing 361 n n C2 HC21 NHE sing 362 n n C2 HC22 NHE sing 363 n n S O1 NHE doub 364 n n S O2 NHE doub 365 n n S O3 NHE sing 366 n n O3 HO3 NHE sing 367 n n C5' C4' NHE sing 368 n n C5' "H5'1" NHE sing 369 n n C5' "H5'2" NHE sing 370 n n C4' "H4'1" NHE sing 371 n n C4' "H4'2" NHE sing 372 n n # _atom_sites.entry_id 5K6Q _atom_sites.fract_transf_matrix[1][1] 0.005589 _atom_sites.fract_transf_matrix[1][2] 0.003227 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006453 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005374 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 701 699 MG MG . C 3 FAD A 1 702 701 FAD FAD . D 4 NHE A 1 703 1 NHE NHE . E 5 TDM A 1 704 1 TDM TDM . F 6 HOH A 1 801 153 HOH HOH . F 6 HOH A 2 802 165 HOH HOH . F 6 HOH A 3 803 104 HOH HOH . F 6 HOH A 4 804 67 HOH HOH . F 6 HOH A 5 805 34 HOH HOH . F 6 HOH A 6 806 152 HOH HOH . F 6 HOH A 7 807 58 HOH HOH . F 6 HOH A 8 808 22 HOH HOH . F 6 HOH A 9 809 105 HOH HOH . F 6 HOH A 10 810 95 HOH HOH . F 6 HOH A 11 811 157 HOH HOH . F 6 HOH A 12 812 132 HOH HOH . F 6 HOH A 13 813 68 HOH HOH . F 6 HOH A 14 814 64 HOH HOH . F 6 HOH A 15 815 26 HOH HOH . F 6 HOH A 16 816 173 HOH HOH . F 6 HOH A 17 817 45 HOH HOH . F 6 HOH A 18 818 174 HOH HOH . F 6 HOH A 19 819 10 HOH HOH . F 6 HOH A 20 820 25 HOH HOH . F 6 HOH A 21 821 154 HOH HOH . F 6 HOH A 22 822 178 HOH HOH . F 6 HOH A 23 823 4 HOH HOH . F 6 HOH A 24 824 49 HOH HOH . F 6 HOH A 25 825 98 HOH HOH . F 6 HOH A 26 826 72 HOH HOH . F 6 HOH A 27 827 23 HOH HOH . F 6 HOH A 28 828 1 HOH HOH . F 6 HOH A 29 829 8 HOH HOH . F 6 HOH A 30 830 122 HOH HOH . F 6 HOH A 31 831 117 HOH HOH . F 6 HOH A 32 832 73 HOH HOH . F 6 HOH A 33 833 9 HOH HOH . F 6 HOH A 34 834 6 HOH HOH . F 6 HOH A 35 835 2 HOH HOH . F 6 HOH A 36 836 101 HOH HOH . F 6 HOH A 37 837 109 HOH HOH . F 6 HOH A 38 838 14 HOH HOH . F 6 HOH A 39 839 12 HOH HOH . F 6 HOH A 40 840 135 HOH HOH . F 6 HOH A 41 841 128 HOH HOH . F 6 HOH A 42 842 52 HOH HOH . F 6 HOH A 43 843 37 HOH HOH . F 6 HOH A 44 844 140 HOH HOH . F 6 HOH A 45 845 161 HOH HOH . F 6 HOH A 46 846 172 HOH HOH . F 6 HOH A 47 847 97 HOH HOH . F 6 HOH A 48 848 155 HOH HOH . F 6 HOH A 49 849 141 HOH HOH . F 6 HOH A 50 850 81 HOH HOH . F 6 HOH A 51 851 61 HOH HOH . F 6 HOH A 52 852 127 HOH HOH . F 6 HOH A 53 853 43 HOH HOH . F 6 HOH A 54 854 59 HOH HOH . F 6 HOH A 55 855 177 HOH HOH . F 6 HOH A 56 856 89 HOH HOH . F 6 HOH A 57 857 33 HOH HOH . F 6 HOH A 58 858 85 HOH HOH . F 6 HOH A 59 859 48 HOH HOH . F 6 HOH A 60 860 5 HOH HOH . F 6 HOH A 61 861 143 HOH HOH . F 6 HOH A 62 862 126 HOH HOH . F 6 HOH A 63 863 29 HOH HOH . F 6 HOH A 64 864 38 HOH HOH . F 6 HOH A 65 865 21 HOH HOH . F 6 HOH A 66 866 20 HOH HOH . F 6 HOH A 67 867 16 HOH HOH . F 6 HOH A 68 868 71 HOH HOH . F 6 HOH A 69 869 53 HOH HOH . F 6 HOH A 70 870 44 HOH HOH . F 6 HOH A 71 871 76 HOH HOH . F 6 HOH A 72 872 88 HOH HOH . F 6 HOH A 73 873 142 HOH HOH . F 6 HOH A 74 874 55 HOH HOH . F 6 HOH A 75 875 57 HOH HOH . F 6 HOH A 76 876 35 HOH HOH . F 6 HOH A 77 877 24 HOH HOH . F 6 HOH A 78 878 82 HOH HOH . F 6 HOH A 79 879 93 HOH HOH . F 6 HOH A 80 880 80 HOH HOH . F 6 HOH A 81 881 147 HOH HOH . F 6 HOH A 82 882 83 HOH HOH . F 6 HOH A 83 883 176 HOH HOH . F 6 HOH A 84 884 114 HOH HOH . F 6 HOH A 85 885 136 HOH HOH . F 6 HOH A 86 886 28 HOH HOH . F 6 HOH A 87 887 50 HOH HOH . F 6 HOH A 88 888 138 HOH HOH . F 6 HOH A 89 889 3 HOH HOH . F 6 HOH A 90 890 137 HOH HOH . F 6 HOH A 91 891 145 HOH HOH . F 6 HOH A 92 892 31 HOH HOH . F 6 HOH A 93 893 30 HOH HOH . F 6 HOH A 94 894 103 HOH HOH . F 6 HOH A 95 895 27 HOH HOH . F 6 HOH A 96 896 13 HOH HOH . F 6 HOH A 97 897 39 HOH HOH . F 6 HOH A 98 898 18 HOH HOH . F 6 HOH A 99 899 78 HOH HOH . F 6 HOH A 100 900 60 HOH HOH . F 6 HOH A 101 901 121 HOH HOH . F 6 HOH A 102 902 113 HOH HOH . F 6 HOH A 103 903 63 HOH HOH . F 6 HOH A 104 904 99 HOH HOH . F 6 HOH A 105 905 74 HOH HOH . F 6 HOH A 106 906 115 HOH HOH . F 6 HOH A 107 907 75 HOH HOH . F 6 HOH A 108 908 47 HOH HOH . F 6 HOH A 109 909 77 HOH HOH . F 6 HOH A 110 910 32 HOH HOH . F 6 HOH A 111 911 124 HOH HOH . F 6 HOH A 112 912 51 HOH HOH . F 6 HOH A 113 913 40 HOH HOH . F 6 HOH A 114 914 96 HOH HOH . F 6 HOH A 115 915 170 HOH HOH . F 6 HOH A 116 916 175 HOH HOH . F 6 HOH A 117 917 87 HOH HOH . F 6 HOH A 118 918 66 HOH HOH . F 6 HOH A 119 919 118 HOH HOH . F 6 HOH A 120 920 42 HOH HOH . F 6 HOH A 121 921 102 HOH HOH . F 6 HOH A 122 922 171 HOH HOH . F 6 HOH A 123 923 94 HOH HOH . F 6 HOH A 124 924 70 HOH HOH . F 6 HOH A 125 925 162 HOH HOH . F 6 HOH A 126 926 156 HOH HOH . F 6 HOH A 127 927 92 HOH HOH . F 6 HOH A 128 928 167 HOH HOH . F 6 HOH A 129 929 119 HOH HOH . F 6 HOH A 130 930 46 HOH HOH . F 6 HOH A 131 931 112 HOH HOH . F 6 HOH A 132 932 146 HOH HOH . F 6 HOH A 133 933 120 HOH HOH . F 6 HOH A 134 934 91 HOH HOH . F 6 HOH A 135 935 166 HOH HOH . F 6 HOH A 136 936 110 HOH HOH . F 6 HOH A 137 937 123 HOH HOH . F 6 HOH A 138 938 84 HOH HOH . F 6 HOH A 139 939 90 HOH HOH . F 6 HOH A 140 940 56 HOH HOH . F 6 HOH A 141 941 133 HOH HOH . F 6 HOH A 142 942 144 HOH HOH . F 6 HOH A 143 943 15 HOH HOH . F 6 HOH A 144 944 125 HOH HOH . F 6 HOH A 145 945 106 HOH HOH . F 6 HOH A 146 946 41 HOH HOH . F 6 HOH A 147 947 164 HOH HOH . F 6 HOH A 148 948 134 HOH HOH . F 6 HOH A 149 949 116 HOH HOH . F 6 HOH A 150 950 130 HOH HOH . F 6 HOH A 151 951 11 HOH HOH . F 6 HOH A 152 952 54 HOH HOH . F 6 HOH A 153 953 100 HOH HOH . F 6 HOH A 154 954 7 HOH HOH . F 6 HOH A 155 955 149 HOH HOH . F 6 HOH A 156 956 79 HOH HOH . F 6 HOH A 157 957 139 HOH HOH . F 6 HOH A 158 958 160 HOH HOH . F 6 HOH A 159 959 129 HOH HOH . F 6 HOH A 160 960 150 HOH HOH . F 6 HOH A 161 961 36 HOH HOH . F 6 HOH A 162 962 111 HOH HOH . F 6 HOH A 163 963 131 HOH HOH . F 6 HOH A 164 964 168 HOH HOH . F 6 HOH A 165 965 17 HOH HOH . F 6 HOH A 166 966 151 HOH HOH . F 6 HOH A 167 967 86 HOH HOH . F 6 HOH A 168 968 159 HOH HOH . F 6 HOH A 169 969 19 HOH HOH . F 6 HOH A 170 970 108 HOH HOH . F 6 HOH A 171 971 163 HOH HOH . F 6 HOH A 172 972 69 HOH HOH . F 6 HOH A 173 973 169 HOH HOH . F 6 HOH A 174 974 148 HOH HOH . F 6 HOH A 175 975 65 HOH HOH . F 6 HOH A 176 976 158 HOH HOH . F 6 HOH A 177 977 107 HOH HOH . F 6 HOH A 178 978 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3' NHE . . . D 4 43.762 -67.743 -21.027 1 90.5 ? C3' NHE 703 A 1 HETATM 2 C C2' NHE . . . D 4 42.25 -67.795 -21.004 1 97.83 ? C2' NHE 703 A 1 HETATM 3 C C1' NHE . . . D 4 41.548 -66.706 -20.203 1 99.6 ? C1' NHE 703 A 1 HETATM 4 C C6' NHE . . . D 4 42.357 -65.959 -19.15 1 77.5 ? C6' NHE 703 A 1 HETATM 5 N N NHE . . . D 4 40.924 -65.771 -21.08 1 105.26 ? N NHE 703 A 1 HETATM 6 C C1 NHE . . . D 4 39.811 -65.212 -20.388 1 109.24 ? C1 NHE 703 A 1 HETATM 7 C C2 NHE . . . D 4 38.505 -65.511 -21.089 1 95.92 ? C2 NHE 703 A 1 HETATM 8 S S NHE . . . D 4 37.219 -65.629 -19.873 1 111.51 ? S NHE 703 A 1 HETATM 9 O O1 NHE . . . D 4 35.86 -65.528 -20.525 1 129.57 ? O1 NHE 703 A 1 HETATM 10 O O2 NHE . . . D 4 37.346 -66.902 -19.07 1 122.96 ? O2 NHE 703 A 1 HETATM 11 O O3 NHE . . . D 4 37.387 -64.59 -18.791 1 97.5 ? O3 NHE 703 A 1 HETATM 12 C C5' NHE . . . D 4 43.862 -66.017 -19.292 1 79.58 ? C5' NHE 703 A 1 HETATM 13 C C4' NHE . . . D 4 44.322 -67.401 -19.671 1 86.82 ? C4' NHE 703 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 13 #