data_5K7R # _model_server_result.job_id pn_-WiqCe7OKzFejRgY_GA _model_server_result.datetime_utc '2024-12-22 17:17:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k7r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5K7R # _exptl.entry_id 5K7R _exptl.method 'ELECTRON CRYSTALLOGRAPHY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5K7R _cell.length_a 53.184 _cell.length_b 56.428 _cell.length_c 64.672 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K7R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 30 1_555 A SG CYS 137 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 25 A CYS 48 1_555 A SG CYS 41 A CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 109 A CYS 132 1_555 A SG CYS 210 A CYS 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 A SG CYS 116 A CYS 139 1_555 A SG CYS 183 A CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf5 A SG CYS 148 A CYS 171 1_555 A SG CYS 162 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 A SG CYS 173 A CYS 196 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A OE1 GLU 52 A GLU 75 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc2 A O ASN 54 A ASN 77 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc3 A O VAL 57 A VAL 80 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc4 A OE1 GLU 59 A GLU 82 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? metalc ? metalc5 A OE2 GLU 62 A GLU 85 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc6 B CA CA . A CA 301 1_555 D O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc7 C CA CA . A CA 302 1_555 D O HOH . A HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5K7R _atom_sites.fract_transf_matrix[1][1] 0.018803 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015463 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 2 CA A 1 302 2 CA CA . D 3 HOH A 1 401 81 HOH HOH . D 3 HOH A 2 402 124 HOH HOH . D 3 HOH A 3 403 132 HOH HOH . D 3 HOH A 4 404 129 HOH HOH . D 3 HOH A 5 405 62 HOH HOH . D 3 HOH A 6 406 166 HOH HOH . D 3 HOH A 7 407 131 HOH HOH . D 3 HOH A 8 408 8 HOH HOH . D 3 HOH A 9 409 49 HOH HOH . D 3 HOH A 10 410 74 HOH HOH . D 3 HOH A 11 411 122 HOH HOH . D 3 HOH A 12 412 93 HOH HOH . D 3 HOH A 13 413 91 HOH HOH . D 3 HOH A 14 414 126 HOH HOH . D 3 HOH A 15 415 15 HOH HOH . D 3 HOH A 16 416 61 HOH HOH . D 3 HOH A 17 417 4 HOH HOH . D 3 HOH A 18 418 136 HOH HOH . D 3 HOH A 19 419 10 HOH HOH . D 3 HOH A 20 420 149 HOH HOH . D 3 HOH A 21 421 108 HOH HOH . D 3 HOH A 22 422 175 HOH HOH . D 3 HOH A 23 423 5 HOH HOH . D 3 HOH A 24 424 164 HOH HOH . D 3 HOH A 25 425 85 HOH HOH . D 3 HOH A 26 426 23 HOH HOH . D 3 HOH A 27 427 88 HOH HOH . D 3 HOH A 28 428 141 HOH HOH . D 3 HOH A 29 429 28 HOH HOH . D 3 HOH A 30 430 111 HOH HOH . D 3 HOH A 31 431 2 HOH HOH . D 3 HOH A 32 432 127 HOH HOH . D 3 HOH A 33 433 19 HOH HOH . D 3 HOH A 34 434 128 HOH HOH . D 3 HOH A 35 435 144 HOH HOH . D 3 HOH A 36 436 92 HOH HOH . D 3 HOH A 37 437 101 HOH HOH . D 3 HOH A 38 438 38 HOH HOH . D 3 HOH A 39 439 78 HOH HOH . D 3 HOH A 40 440 130 HOH HOH . D 3 HOH A 41 441 47 HOH HOH . D 3 HOH A 42 442 151 HOH HOH . D 3 HOH A 43 443 6 HOH HOH . D 3 HOH A 44 444 63 HOH HOH . D 3 HOH A 45 445 39 HOH HOH . D 3 HOH A 46 446 172 HOH HOH . D 3 HOH A 47 447 50 HOH HOH . D 3 HOH A 48 448 89 HOH HOH . D 3 HOH A 49 449 167 HOH HOH . D 3 HOH A 50 450 157 HOH HOH . D 3 HOH A 51 451 16 HOH HOH . D 3 HOH A 52 452 159 HOH HOH . D 3 HOH A 53 453 109 HOH HOH . D 3 HOH A 54 454 115 HOH HOH . D 3 HOH A 55 455 12 HOH HOH . D 3 HOH A 56 456 37 HOH HOH . D 3 HOH A 57 457 195 HOH HOH . D 3 HOH A 58 458 41 HOH HOH . D 3 HOH A 59 459 77 HOH HOH . D 3 HOH A 60 460 137 HOH HOH . D 3 HOH A 61 461 143 HOH HOH . D 3 HOH A 62 462 83 HOH HOH . D 3 HOH A 63 463 182 HOH HOH . D 3 HOH A 64 464 18 HOH HOH . D 3 HOH A 65 465 193 HOH HOH . D 3 HOH A 66 466 66 HOH HOH . D 3 HOH A 67 467 17 HOH HOH . D 3 HOH A 68 468 75 HOH HOH . D 3 HOH A 69 469 113 HOH HOH . D 3 HOH A 70 470 176 HOH HOH . D 3 HOH A 71 471 102 HOH HOH . D 3 HOH A 72 472 7 HOH HOH . D 3 HOH A 73 473 35 HOH HOH . D 3 HOH A 74 474 22 HOH HOH . D 3 HOH A 75 475 64 HOH HOH . D 3 HOH A 76 476 104 HOH HOH . D 3 HOH A 77 477 180 HOH HOH . D 3 HOH A 78 478 133 HOH HOH . D 3 HOH A 79 479 105 HOH HOH . D 3 HOH A 80 480 34 HOH HOH . D 3 HOH A 81 481 106 HOH HOH . D 3 HOH A 82 482 20 HOH HOH . D 3 HOH A 83 483 82 HOH HOH . D 3 HOH A 84 484 71 HOH HOH . D 3 HOH A 85 485 184 HOH HOH . D 3 HOH A 86 486 96 HOH HOH . D 3 HOH A 87 487 40 HOH HOH . D 3 HOH A 88 488 3 HOH HOH . D 3 HOH A 89 489 42 HOH HOH . D 3 HOH A 90 490 99 HOH HOH . D 3 HOH A 91 491 179 HOH HOH . D 3 HOH A 92 492 119 HOH HOH . D 3 HOH A 93 493 134 HOH HOH . D 3 HOH A 94 494 70 HOH HOH . D 3 HOH A 95 495 53 HOH HOH . D 3 HOH A 96 496 171 HOH HOH . D 3 HOH A 97 497 148 HOH HOH . D 3 HOH A 98 498 118 HOH HOH . D 3 HOH A 99 499 147 HOH HOH . D 3 HOH A 100 500 155 HOH HOH . D 3 HOH A 101 501 194 HOH HOH . D 3 HOH A 102 502 43 HOH HOH . D 3 HOH A 103 503 48 HOH HOH . D 3 HOH A 104 504 162 HOH HOH . D 3 HOH A 105 505 181 HOH HOH . D 3 HOH A 106 506 192 HOH HOH . D 3 HOH A 107 507 27 HOH HOH . D 3 HOH A 108 508 140 HOH HOH . D 3 HOH A 109 509 87 HOH HOH . D 3 HOH A 110 510 94 HOH HOH . D 3 HOH A 111 511 31 HOH HOH . D 3 HOH A 112 512 14 HOH HOH . D 3 HOH A 113 513 153 HOH HOH . D 3 HOH A 114 514 69 HOH HOH . D 3 HOH A 115 515 168 HOH HOH . D 3 HOH A 116 516 90 HOH HOH . D 3 HOH A 117 517 72 HOH HOH . D 3 HOH A 118 518 45 HOH HOH . D 3 HOH A 119 519 33 HOH HOH . D 3 HOH A 120 520 60 HOH HOH . D 3 HOH A 121 521 29 HOH HOH . D 3 HOH A 122 522 120 HOH HOH . D 3 HOH A 123 523 100 HOH HOH . D 3 HOH A 124 524 25 HOH HOH . D 3 HOH A 125 525 84 HOH HOH . D 3 HOH A 126 526 59 HOH HOH . D 3 HOH A 127 527 36 HOH HOH . D 3 HOH A 128 528 24 HOH HOH . D 3 HOH A 129 529 154 HOH HOH . D 3 HOH A 130 530 13 HOH HOH . D 3 HOH A 131 531 86 HOH HOH . D 3 HOH A 132 532 26 HOH HOH . D 3 HOH A 133 533 145 HOH HOH . D 3 HOH A 134 534 152 HOH HOH . D 3 HOH A 135 535 117 HOH HOH . D 3 HOH A 136 536 51 HOH HOH . D 3 HOH A 137 537 165 HOH HOH . D 3 HOH A 138 538 139 HOH HOH . D 3 HOH A 139 539 185 HOH HOH . D 3 HOH A 140 540 76 HOH HOH . D 3 HOH A 141 541 98 HOH HOH . D 3 HOH A 142 542 95 HOH HOH . D 3 HOH A 143 543 32 HOH HOH . D 3 HOH A 144 544 135 HOH HOH . D 3 HOH A 145 545 116 HOH HOH . D 3 HOH A 146 546 46 HOH HOH . D 3 HOH A 147 547 9 HOH HOH . D 3 HOH A 148 548 21 HOH HOH . D 3 HOH A 149 549 97 HOH HOH . D 3 HOH A 150 550 79 HOH HOH . D 3 HOH A 151 551 107 HOH HOH . D 3 HOH A 152 552 65 HOH HOH . D 3 HOH A 153 553 190 HOH HOH . D 3 HOH A 154 554 11 HOH HOH . D 3 HOH A 155 555 54 HOH HOH . D 3 HOH A 156 556 103 HOH HOH . D 3 HOH A 157 557 187 HOH HOH . D 3 HOH A 158 558 68 HOH HOH . D 3 HOH A 159 559 114 HOH HOH . D 3 HOH A 160 560 110 HOH HOH . D 3 HOH A 161 561 58 HOH HOH . D 3 HOH A 162 562 156 HOH HOH . D 3 HOH A 163 563 161 HOH HOH . D 3 HOH A 164 564 158 HOH HOH . D 3 HOH A 165 565 67 HOH HOH . D 3 HOH A 166 566 188 HOH HOH . D 3 HOH A 167 567 146 HOH HOH . D 3 HOH A 168 568 44 HOH HOH . D 3 HOH A 169 569 1 HOH HOH . D 3 HOH A 170 570 189 HOH HOH . D 3 HOH A 171 571 169 HOH HOH . D 3 HOH A 172 572 52 HOH HOH . D 3 HOH A 173 573 55 HOH HOH . D 3 HOH A 174 574 177 HOH HOH . D 3 HOH A 175 575 178 HOH HOH . D 3 HOH A 176 576 57 HOH HOH . D 3 HOH A 177 577 121 HOH HOH . D 3 HOH A 178 578 142 HOH HOH . D 3 HOH A 179 579 125 HOH HOH . D 3 HOH A 180 580 56 HOH HOH . D 3 HOH A 181 581 160 HOH HOH . D 3 HOH A 182 582 30 HOH HOH . D 3 HOH A 183 583 183 HOH HOH . D 3 HOH A 184 584 150 HOH HOH . D 3 HOH A 185 585 112 HOH HOH . D 3 HOH A 186 586 80 HOH HOH . D 3 HOH A 187 587 123 HOH HOH . D 3 HOH A 188 588 186 HOH HOH . D 3 HOH A 189 589 163 HOH HOH . D 3 HOH A 190 590 138 HOH HOH . D 3 HOH A 191 591 173 HOH HOH . D 3 HOH A 192 592 174 HOH HOH . D 3 HOH A 193 593 73 HOH HOH . D 3 HOH A 194 594 170 HOH HOH . D 3 HOH A 195 595 191 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 1.663 _atom_site.Cartn_y -11.022 _atom_site.Cartn_z 10.04 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #