data_5K7T # _model_server_result.job_id 2pOz9O-fyRmeouUteB1RTg _model_server_result.datetime_utc '2024-11-14 06:33:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k7t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":607}' # _entry.id 5K7T # _exptl.entry_id 5K7T _exptl.method 'ELECTRON CRYSTALLOGRAPHY' # _entity.details ? _entity.formula_weight 60.095 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ISOPROPYL ALCOHOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5K7T _cell.length_a 92.065 _cell.length_b 92.065 _cell.length_c 128.498 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K7T _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 57 A ASP 289 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc2 A OD1 ASP 59 A ASP 291 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc3 A O GLN 61 A GLN 293 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc4 A OD2 ASP 138 A ASP 370 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? metalc ? metalc5 A NE2 HIS 142 A HIS 374 1_555 F ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc6 A NE2 HIS 146 A HIS 378 1_555 F ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc7 A OE2 GLU 166 A GLU 398 1_555 F ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc8 A OE1 GLU 177 A GLU 409 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc9 A OE2 GLU 177 A GLU 409 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.986 ? metalc ? metalc10 A O ASN 183 A ASN 415 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc11 A OD1 ASP 185 A ASP 417 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.171 ? metalc ? metalc12 A OD2 ASP 185 A ASP 417 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc13 A O GLU 187 A GLU 419 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc14 A OE1 GLU 190 A GLU 422 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc15 A OE2 GLU 190 A GLU 422 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc16 A O TYR 193 A TYR 425 1_555 E CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc17 A O THR 194 A THR 426 1_555 E CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc18 A OG1 THR 194 A THR 426 1_555 E CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc19 A O ILE 197 A ILE 429 1_555 E CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc20 A OD1 ASP 200 A ASP 432 1_555 E CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc21 E CA CA . A CA 604 1_555 I O HOH . A HOH 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? # _chem_comp.formula 'C3 H8 O' _chem_comp.formula_weight 60.095 _chem_comp.id IPA _chem_comp.mon_nstd_flag . _chem_comp.name 'ISOPROPYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-PROPANOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPA sing 169 n n C1 H11 IPA sing 170 n n C1 H12 IPA sing 171 n n C1 H13 IPA sing 172 n n C2 C3 IPA sing 173 n n C2 O2 IPA sing 174 n n C2 H2 IPA sing 175 n n C3 H31 IPA sing 176 n n C3 H32 IPA sing 177 n n C3 H33 IPA sing 178 n n O2 HO2 IPA sing 179 n n # _atom_sites.entry_id 5K7T _atom_sites.fract_transf_matrix[1][1] 0.010862 _atom_sites.fract_transf_matrix[1][2] 0.006271 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 601 1 CA CA . C 2 CA A 1 602 2 CA CA . D 2 CA A 1 603 3 CA CA . E 2 CA A 1 604 4 CA CA . F 3 ZN A 1 605 5 ZN ZN . G 4 DMS A 1 606 1 DMS DMS . H 5 IPA A 1 607 1 IPA IPA . I 6 HOH A 1 701 8 HOH HOH . I 6 HOH A 2 702 12 HOH HOH . I 6 HOH A 3 703 17 HOH HOH . I 6 HOH A 4 704 20 HOH HOH . I 6 HOH A 5 705 3 HOH HOH . I 6 HOH A 6 706 7 HOH HOH . I 6 HOH A 7 707 16 HOH HOH . I 6 HOH A 8 708 14 HOH HOH . I 6 HOH A 9 709 15 HOH HOH . I 6 HOH A 10 710 11 HOH HOH . I 6 HOH A 11 711 5 HOH HOH . I 6 HOH A 12 712 4 HOH HOH . I 6 HOH A 13 713 6 HOH HOH . I 6 HOH A 14 714 10 HOH HOH . I 6 HOH A 15 715 2 HOH HOH . I 6 HOH A 16 716 13 HOH HOH . I 6 HOH A 17 717 1 HOH HOH . I 6 HOH A 18 718 19 HOH HOH . I 6 HOH A 19 719 18 HOH HOH . I 6 HOH A 20 720 21 HOH HOH . I 6 HOH A 21 721 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPA . . . H 5 9.521 36.78 -1.609 1 3.31 ? C1 IPA 607 A 1 HETATM 2 C C2 IPA . . . H 5 10.3 38.032 -1.993 1 4.44 ? C2 IPA 607 A 1 HETATM 3 C C3 IPA . . . H 5 9.908 39.18 -1.071 1 3.07 ? C3 IPA 607 A 1 HETATM 4 O O2 IPA . . . H 5 10.002 38.374 -3.328 1 4.12 ? O2 IPA 607 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #