data_5K8T # _model_server_result.job_id K1amak7l788EaXGSzBCHFQ _model_server_result.datetime_utc '2024-11-29 16:06:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5k8t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":704}' # _entry.id 5K8T # _exptl.entry_id 5K8T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.04 _cell.angle_gamma 90 _cell.entry_id 5K8T _cell.length_a 63.95 _cell.length_b 53.42 _cell.length_c 65.39 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K8T _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 38 A THR 201 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc2 A OE2 GLU 123 A GLU 286 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc3 B O3G GSP . A GSP 701 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc4 B O2B GSP . A GSP 701 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc5 D MG MG . A MG 703 1_555 F O HOH . A HOH 823 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? metalc ? metalc6 D MG MG . A MG 703 1_555 F O HOH . A HOH 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc7 E MG MG . A MG 704 1_555 F O HOH . A HOH 801 2_957 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? metalc ? metalc8 E MG MG . A MG 704 1_555 F O HOH . A HOH 838 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc9 E MG MG . A MG 704 1_555 F O HOH . A HOH 934 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc10 E MG MG . A MG 704 1_555 F O HOH . A HOH 953 2_957 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5K8T _atom_sites.fract_transf_matrix[1][1] 0.015637 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004202 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSP A 1 701 1 GSP GSP . C 3 CL A 1 702 2 CL CL . D 4 MG A 1 703 3 MG MG . E 4 MG A 1 704 4 MG MG . F 5 HOH A 1 801 1 HOH HOH . F 5 HOH A 2 802 117 HOH HOH . F 5 HOH A 3 803 146 HOH HOH . F 5 HOH A 4 804 47 HOH HOH . F 5 HOH A 5 805 67 HOH HOH . F 5 HOH A 6 806 123 HOH HOH . F 5 HOH A 7 807 112 HOH HOH . F 5 HOH A 8 808 38 HOH HOH . F 5 HOH A 9 809 153 HOH HOH . F 5 HOH A 10 810 122 HOH HOH . F 5 HOH A 11 811 52 HOH HOH . F 5 HOH A 12 812 142 HOH HOH . F 5 HOH A 13 813 85 HOH HOH . F 5 HOH A 14 814 87 HOH HOH . F 5 HOH A 15 815 40 HOH HOH . F 5 HOH A 16 816 108 HOH HOH . F 5 HOH A 17 817 34 HOH HOH . F 5 HOH A 18 818 46 HOH HOH . F 5 HOH A 19 819 83 HOH HOH . F 5 HOH A 20 820 60 HOH HOH . F 5 HOH A 21 821 145 HOH HOH . F 5 HOH A 22 822 90 HOH HOH . F 5 HOH A 23 823 156 HOH HOH . F 5 HOH A 24 824 26 HOH HOH . F 5 HOH A 25 825 100 HOH HOH . F 5 HOH A 26 826 50 HOH HOH . F 5 HOH A 27 827 111 HOH HOH . F 5 HOH A 28 828 27 HOH HOH . F 5 HOH A 29 829 69 HOH HOH . F 5 HOH A 30 830 89 HOH HOH . F 5 HOH A 31 831 55 HOH HOH . F 5 HOH A 32 832 118 HOH HOH . F 5 HOH A 33 833 4 HOH HOH . F 5 HOH A 34 834 11 HOH HOH . F 5 HOH A 35 835 95 HOH HOH . F 5 HOH A 36 836 134 HOH HOH . F 5 HOH A 37 837 119 HOH HOH . F 5 HOH A 38 838 115 HOH HOH . F 5 HOH A 39 839 106 HOH HOH . F 5 HOH A 40 840 131 HOH HOH . F 5 HOH A 41 841 20 HOH HOH . F 5 HOH A 42 842 62 HOH HOH . F 5 HOH A 43 843 63 HOH HOH . F 5 HOH A 44 844 48 HOH HOH . F 5 HOH A 45 845 41 HOH HOH . F 5 HOH A 46 846 102 HOH HOH . F 5 HOH A 47 847 64 HOH HOH . F 5 HOH A 48 848 42 HOH HOH . F 5 HOH A 49 849 127 HOH HOH . F 5 HOH A 50 850 61 HOH HOH . F 5 HOH A 51 851 96 HOH HOH . F 5 HOH A 52 852 114 HOH HOH . F 5 HOH A 53 853 77 HOH HOH . F 5 HOH A 54 854 88 HOH HOH . F 5 HOH A 55 855 7 HOH HOH . F 5 HOH A 56 856 37 HOH HOH . F 5 HOH A 57 857 133 HOH HOH . F 5 HOH A 58 858 13 HOH HOH . F 5 HOH A 59 859 159 HOH HOH . F 5 HOH A 60 860 57 HOH HOH . F 5 HOH A 61 861 155 HOH HOH . F 5 HOH A 62 862 132 HOH HOH . F 5 HOH A 63 863 70 HOH HOH . F 5 HOH A 64 864 15 HOH HOH . F 5 HOH A 65 865 43 HOH HOH . F 5 HOH A 66 866 2 HOH HOH . F 5 HOH A 67 867 80 HOH HOH . F 5 HOH A 68 868 120 HOH HOH . F 5 HOH A 69 869 75 HOH HOH . F 5 HOH A 70 870 36 HOH HOH . F 5 HOH A 71 871 93 HOH HOH . F 5 HOH A 72 872 16 HOH HOH . F 5 HOH A 73 873 94 HOH HOH . F 5 HOH A 74 874 109 HOH HOH . F 5 HOH A 75 875 128 HOH HOH . F 5 HOH A 76 876 68 HOH HOH . F 5 HOH A 77 877 97 HOH HOH . F 5 HOH A 78 878 14 HOH HOH . F 5 HOH A 79 879 28 HOH HOH . F 5 HOH A 80 880 125 HOH HOH . F 5 HOH A 81 881 10 HOH HOH . F 5 HOH A 82 882 135 HOH HOH . F 5 HOH A 83 883 51 HOH HOH . F 5 HOH A 84 884 32 HOH HOH . F 5 HOH A 85 885 152 HOH HOH . F 5 HOH A 86 886 22 HOH HOH . F 5 HOH A 87 887 98 HOH HOH . F 5 HOH A 88 888 160 HOH HOH . F 5 HOH A 89 889 54 HOH HOH . F 5 HOH A 90 890 19 HOH HOH . F 5 HOH A 91 891 84 HOH HOH . F 5 HOH A 92 892 151 HOH HOH . F 5 HOH A 93 893 44 HOH HOH . F 5 HOH A 94 894 6 HOH HOH . F 5 HOH A 95 895 12 HOH HOH . F 5 HOH A 96 896 21 HOH HOH . F 5 HOH A 97 897 103 HOH HOH . F 5 HOH A 98 898 49 HOH HOH . F 5 HOH A 99 899 71 HOH HOH . F 5 HOH A 100 900 17 HOH HOH . F 5 HOH A 101 901 79 HOH HOH . F 5 HOH A 102 902 8 HOH HOH . F 5 HOH A 103 903 5 HOH HOH . F 5 HOH A 104 904 30 HOH HOH . F 5 HOH A 105 905 24 HOH HOH . F 5 HOH A 106 906 124 HOH HOH . F 5 HOH A 107 907 81 HOH HOH . F 5 HOH A 108 908 157 HOH HOH . F 5 HOH A 109 909 39 HOH HOH . F 5 HOH A 110 910 141 HOH HOH . F 5 HOH A 111 911 29 HOH HOH . F 5 HOH A 112 912 33 HOH HOH . F 5 HOH A 113 913 9 HOH HOH . F 5 HOH A 114 914 23 HOH HOH . F 5 HOH A 115 915 31 HOH HOH . F 5 HOH A 116 916 3 HOH HOH . F 5 HOH A 117 917 76 HOH HOH . F 5 HOH A 118 918 110 HOH HOH . F 5 HOH A 119 919 113 HOH HOH . F 5 HOH A 120 920 129 HOH HOH . F 5 HOH A 121 921 58 HOH HOH . F 5 HOH A 122 922 73 HOH HOH . F 5 HOH A 123 923 143 HOH HOH . F 5 HOH A 124 924 137 HOH HOH . F 5 HOH A 125 925 86 HOH HOH . F 5 HOH A 126 926 18 HOH HOH . F 5 HOH A 127 927 91 HOH HOH . F 5 HOH A 128 928 126 HOH HOH . F 5 HOH A 129 929 101 HOH HOH . F 5 HOH A 130 930 35 HOH HOH . F 5 HOH A 131 931 45 HOH HOH . F 5 HOH A 132 932 56 HOH HOH . F 5 HOH A 133 933 136 HOH HOH . F 5 HOH A 134 934 158 HOH HOH . F 5 HOH A 135 935 105 HOH HOH . F 5 HOH A 136 936 82 HOH HOH . F 5 HOH A 137 937 121 HOH HOH . F 5 HOH A 138 938 99 HOH HOH . F 5 HOH A 139 939 25 HOH HOH . F 5 HOH A 140 940 149 HOH HOH . F 5 HOH A 141 941 66 HOH HOH . F 5 HOH A 142 942 107 HOH HOH . F 5 HOH A 143 943 116 HOH HOH . F 5 HOH A 144 944 92 HOH HOH . F 5 HOH A 145 945 138 HOH HOH . F 5 HOH A 146 946 130 HOH HOH . F 5 HOH A 147 947 59 HOH HOH . F 5 HOH A 148 948 53 HOH HOH . F 5 HOH A 149 949 148 HOH HOH . F 5 HOH A 150 950 139 HOH HOH . F 5 HOH A 151 951 74 HOH HOH . F 5 HOH A 152 952 144 HOH HOH . F 5 HOH A 153 953 78 HOH HOH . F 5 HOH A 154 954 65 HOH HOH . F 5 HOH A 155 955 72 HOH HOH . F 5 HOH A 156 956 104 HOH HOH . F 5 HOH A 157 957 154 HOH HOH . F 5 HOH A 158 958 147 HOH HOH . F 5 HOH A 159 959 150 HOH HOH . F 5 HOH A 160 960 140 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 117.26 _atom_site.Cartn_y 12.093 _atom_site.Cartn_z 56.547 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 704 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #