data_5K92
#
_model_server_result.job_id            -DeqFMK4O9vetI3cU6RRqg 
_model_server_result.datetime_utc      '2024-10-28 02:31:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5k92 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":103}' 
#
_entry.id    5K92 
#
_exptl.entry_id    5K92 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          118.78 
_cell.angle_gamma         90 
_cell.entry_id            5K92 
_cell.length_a            77.574 
_cell.length_b            29.409 
_cell.length_c            44.353 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5K92 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 M N N 
? 3 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ACE 1 A ACE 0 1_555 A N GLU 2 A GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 A C GLY 30 A GLY 29 1_555 A N NH2 31 A NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 B C ACE 1 B ACE 0 1_555 B N GLU 2 B GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 B C GLY 30 B GLY 29 1_555 B N NH2 31 B NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale5 C C ACE 1 C ACE 0 1_555 C N GLU 2 C GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
covale ? covale6 C OE1 GLU 28 C GLU 27 1_555 O CL CL . C CL 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? 
metalc ? metalc1 A OE1 GLU 7 A GLU 6 1_555 K ZN ZN . C ZN 101 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? 
metalc ? metalc2 A OE2 GLU 7 A GLU 6 1_555 K ZN ZN . C ZN 101 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? 
metalc ? metalc3 A OE1 GLU 25 A GLU 24 1_555 D ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? 
metalc ? metalc4 A OE2 GLU 25 A GLU 24 1_555 D ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? 
metalc ? metalc5 A NE2 HIS 29 A HIS 28 1_555 E ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc6 D ZN ZN . A ZN 101 4_555 B OE2 GLU 25 B GLU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? 
metalc ? metalc7 D ZN ZN . A ZN 101 4_555 B NE2 HIS 29 B HIS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
metalc ? metalc8 D ZN ZN . A ZN 101 1_555 Q O HOH . B HOH 201 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? 
metalc ? metalc9 E ZN ZN . A ZN 102 1_556 B OE1 GLU 4 B GLU 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc10 E ZN ZN . A ZN 102 1_556 B OE2 GLU 4 B GLU 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? 
metalc ? metalc11 E ZN ZN . A ZN 102 4_555 B OE1 GLU 21 B GLU 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? 
metalc ? metalc12 E ZN ZN . A ZN 102 4_555 B OE1 GLU 25 B GLU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? 
metalc ? metalc13 P O HOH . A HOH 209 3_545 K ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? 
metalc ? metalc14 C OE2 GLU 2 C GLU 1 1_555 K ZN ZN . C ZN 101 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? 
metalc ? metalc15 C NE2 HIS 29 C HIS 28 1_555 K ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 148 n n 
C1 C2 PEG sing 149 n n 
C1 H11 PEG sing 150 n n 
C1 H12 PEG sing 151 n n 
O1 HO1 PEG sing 152 n n 
C2 O2 PEG sing 153 n n 
C2 H21 PEG sing 154 n n 
C2 H22 PEG sing 155 n n 
O2 C3 PEG sing 156 n n 
C3 C4 PEG sing 157 n n 
C3 H31 PEG sing 158 n n 
C3 H32 PEG sing 159 n n 
C4 O4 PEG sing 160 n n 
C4 H41 PEG sing 161 n n 
C4 H42 PEG sing 162 n n 
O4 HO4 PEG sing 163 n n 
#
_atom_sites.entry_id                     5K92 
_atom_sites.fract_transf_matrix[1][1]    0.012891 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007081 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.034003 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025724 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ZN A 1 101 101 ZN ZN . 
E 2 ZN A 1 102 102 ZN ZN . 
F 3 PEG A 1 103 103 PEG PEG . 
G 3 PEG A 1 104 104 PEG PEG . 
H 3 PEG A 1 105 105 PEG PEG . 
I 3 PEG B 1 101 101 PEG PEG . 
J 4 CL B 1 102 102 CL CL . 
K 2 ZN C 1 101 102 ZN ZN . 
L 5 PGE C 1 102 103 PGE PGE . 
M 3 PEG C 1 103 104 PEG PEG . 
N 3 PEG C 1 104 105 PEG PEG . 
O 4 CL C 1 105 106 CL CL . 
P 6 HOH A 1 201 201 HOH HOH . 
P 6 HOH A 2 202 202 HOH HOH . 
P 6 HOH A 3 203 203 HOH HOH . 
P 6 HOH A 4 204 204 HOH HOH . 
P 6 HOH A 5 205 205 HOH HOH . 
P 6 HOH A 6 206 206 HOH HOH . 
P 6 HOH A 7 207 207 HOH HOH . 
P 6 HOH A 8 208 208 HOH HOH . 
P 6 HOH A 9 209 209 HOH HOH . 
P 6 HOH A 10 210 210 HOH HOH . 
P 6 HOH A 11 211 211 HOH HOH . 
P 6 HOH A 12 212 212 HOH HOH . 
Q 6 HOH B 1 201 201 HOH HOH . 
Q 6 HOH B 2 202 202 HOH HOH . 
Q 6 HOH B 3 203 203 HOH HOH . 
Q 6 HOH B 4 204 204 HOH HOH . 
Q 6 HOH B 5 205 205 HOH HOH . 
Q 6 HOH B 6 206 206 HOH HOH . 
Q 6 HOH B 7 207 207 HOH HOH . 
Q 6 HOH B 8 208 208 HOH HOH . 
Q 6 HOH B 9 209 209 HOH HOH . 
Q 6 HOH B 10 210 210 HOH HOH . 
Q 6 HOH B 11 211 211 HOH HOH . 
Q 6 HOH B 12 212 212 HOH HOH . 
Q 6 HOH B 13 213 213 HOH HOH . 
Q 6 HOH B 14 214 214 HOH HOH . 
Q 6 HOH B 15 215 215 HOH HOH . 
Q 6 HOH B 16 216 216 HOH HOH . 
Q 6 HOH B 17 217 217 HOH HOH . 
Q 6 HOH B 18 218 218 HOH HOH . 
Q 6 HOH B 19 219 219 HOH HOH . 
Q 6 HOH B 20 220 220 HOH HOH . 
R 6 HOH C 1 201 201 HOH HOH . 
R 6 HOH C 2 202 202 HOH HOH . 
R 6 HOH C 3 203 203 HOH HOH . 
R 6 HOH C 4 204 204 HOH HOH . 
R 6 HOH C 5 205 205 HOH HOH . 
R 6 HOH C 6 206 206 HOH HOH . 
R 6 HOH C 7 207 207 HOH HOH . 
R 6 HOH C 8 208 208 HOH HOH . 
R 6 HOH C 9 209 209 HOH HOH . 
R 6 HOH C 10 210 210 HOH HOH . 
R 6 HOH C 11 211 211 HOH HOH . 
R 6 HOH C 12 212 212 HOH HOH . 
R 6 HOH C 13 213 213 HOH HOH . 
R 6 HOH C 14 214 214 HOH HOH . 
R 6 HOH C 15 215 215 HOH HOH . 
R 6 HOH C 16 216 216 HOH HOH . 
R 6 HOH C 17 217 217 HOH HOH . 
R 6 HOH C 18 218 218 HOH HOH . 
R 6 HOH C 19 219 219 HOH HOH . 
R 6 HOH C 20 220 220 HOH HOH . 
R 6 HOH C 21 221 221 HOH HOH . 
R 6 HOH C 22 222 222 HOH HOH . 
R 6 HOH C 23 223 223 HOH HOH . 
R 6 HOH C 24 224 224 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . F 3 12.084 -1.073 -4.385 0.7 37.12 ? C1 PEG 103 A 1 
HETATM 2 O O1 PEG . . . F 3 12.676 -0.553 -3.212 0.7 35.93 ? O1 PEG 103 A 1 
HETATM 3 C C2 PEG . . . F 3 12.677 -0.489 -5.618 0.7 36.73 ? C2 PEG 103 A 1 
HETATM 4 O O2 PEG . . . F 3 11.959 -0.925 -6.771 0.7 38.79 ? O2 PEG 103 A 1 
HETATM 5 C C3 PEG . . . F 3 10.689 -0.294 -6.938 0.7 38.43 ? C3 PEG 103 A 1 
HETATM 6 C C4 PEG . . . F 3 10.77 0.933 -7.784 0.7 42.47 ? C4 PEG 103 A 1 
HETATM 7 O O4 PEG . . . F 3 9.527 1.623 -7.77 0.7 45.42 ? O4 PEG 103 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           200 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           7 
#