data_5KA2
#
_model_server_result.job_id            j9rOG1EgyQzrfh6SwLL1Aw 
_model_server_result.datetime_utc      '2024-12-02 13:23:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ka2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    5KA2 
#
_exptl.entry_id    5KA2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5KA2 
_cell.length_a            87.306 
_cell.length_b            87.306 
_cell.length_c            98.625 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KA2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 347 n n 
C C2 TRS sing 348 n n 
C C3 TRS sing 349 n n 
C N TRS sing 350 n n 
C1 O1 TRS sing 351 n n 
C1 H11 TRS sing 352 n n 
C1 H12 TRS sing 353 n n 
C2 O2 TRS sing 354 n n 
C2 H21 TRS sing 355 n n 
C2 H22 TRS sing 356 n n 
C3 O3 TRS sing 357 n n 
C3 H31 TRS sing 358 n n 
C3 H32 TRS sing 359 n n 
N HN1 TRS sing 360 n n 
N HN2 TRS sing 361 n n 
N HN3 TRS sing 362 n n 
O1 HO1 TRS sing 363 n n 
O2 HO2 TRS sing 364 n n 
O3 HO3 TRS sing 365 n n 
#
_atom_sites.entry_id                     5KA2 
_atom_sites.fract_transf_matrix[1][1]    0.011454 
_atom_sites.fract_transf_matrix[1][2]    0.006613 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013226 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010139 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 301 1 GOL GOL . 
C 2 GOL A 1 302 2 GOL GOL . 
D 3 TRS A 1 303 1 TRS TRS . 
E 4 CL A 1 304 1 CL CL . 
F 4 CL A 1 305 2 CL CL . 
G 4 CL A 1 306 3 CL CL . 
H 4 CL A 1 307 4 CL CL . 
I 4 CL A 1 308 5 CL CL . 
J 4 CL A 1 309 6 CL CL . 
K 5 HOH A 1 401 200 HOH HOH . 
K 5 HOH A 2 402 117 HOH HOH . 
K 5 HOH A 3 403 207 HOH HOH . 
K 5 HOH A 4 404 78 HOH HOH . 
K 5 HOH A 5 405 73 HOH HOH . 
K 5 HOH A 6 406 124 HOH HOH . 
K 5 HOH A 7 407 75 HOH HOH . 
K 5 HOH A 8 408 26 HOH HOH . 
K 5 HOH A 9 409 21 HOH HOH . 
K 5 HOH A 10 410 55 HOH HOH . 
K 5 HOH A 11 411 99 HOH HOH . 
K 5 HOH A 12 412 16 HOH HOH . 
K 5 HOH A 13 413 31 HOH HOH . 
K 5 HOH A 14 414 120 HOH HOH . 
K 5 HOH A 15 415 29 HOH HOH . 
K 5 HOH A 16 416 114 HOH HOH . 
K 5 HOH A 17 417 127 HOH HOH . 
K 5 HOH A 18 418 11 HOH HOH . 
K 5 HOH A 19 419 77 HOH HOH . 
K 5 HOH A 20 420 122 HOH HOH . 
K 5 HOH A 21 421 76 HOH HOH . 
K 5 HOH A 22 422 68 HOH HOH . 
K 5 HOH A 23 423 41 HOH HOH . 
K 5 HOH A 24 424 24 HOH HOH . 
K 5 HOH A 25 425 56 HOH HOH . 
K 5 HOH A 26 426 169 HOH HOH . 
K 5 HOH A 27 427 70 HOH HOH . 
K 5 HOH A 28 428 71 HOH HOH . 
K 5 HOH A 29 429 49 HOH HOH . 
K 5 HOH A 30 430 59 HOH HOH . 
K 5 HOH A 31 431 18 HOH HOH . 
K 5 HOH A 32 432 63 HOH HOH . 
K 5 HOH A 33 433 152 HOH HOH . 
K 5 HOH A 34 434 10 HOH HOH . 
K 5 HOH A 35 435 62 HOH HOH . 
K 5 HOH A 36 436 204 HOH HOH . 
K 5 HOH A 37 437 44 HOH HOH . 
K 5 HOH A 38 438 30 HOH HOH . 
K 5 HOH A 39 439 20 HOH HOH . 
K 5 HOH A 40 440 93 HOH HOH . 
K 5 HOH A 41 441 80 HOH HOH . 
K 5 HOH A 42 442 28 HOH HOH . 
K 5 HOH A 43 443 25 HOH HOH . 
K 5 HOH A 44 444 89 HOH HOH . 
K 5 HOH A 45 445 15 HOH HOH . 
K 5 HOH A 46 446 39 HOH HOH . 
K 5 HOH A 47 447 17 HOH HOH . 
K 5 HOH A 48 448 69 HOH HOH . 
K 5 HOH A 49 449 82 HOH HOH . 
K 5 HOH A 50 450 27 HOH HOH . 
K 5 HOH A 51 451 9 HOH HOH . 
K 5 HOH A 52 452 47 HOH HOH . 
K 5 HOH A 53 453 22 HOH HOH . 
K 5 HOH A 54 454 150 HOH HOH . 
K 5 HOH A 55 455 90 HOH HOH . 
K 5 HOH A 56 456 36 HOH HOH . 
K 5 HOH A 57 457 151 HOH HOH . 
K 5 HOH A 58 458 14 HOH HOH . 
K 5 HOH A 59 459 50 HOH HOH . 
K 5 HOH A 60 460 81 HOH HOH . 
K 5 HOH A 61 461 106 HOH HOH . 
K 5 HOH A 62 462 8 HOH HOH . 
K 5 HOH A 63 463 35 HOH HOH . 
K 5 HOH A 64 464 148 HOH HOH . 
K 5 HOH A 65 465 104 HOH HOH . 
K 5 HOH A 66 466 7 HOH HOH . 
K 5 HOH A 67 467 37 HOH HOH . 
K 5 HOH A 68 468 43 HOH HOH . 
K 5 HOH A 69 469 92 HOH HOH . 
K 5 HOH A 70 470 6 HOH HOH . 
K 5 HOH A 71 471 72 HOH HOH . 
K 5 HOH A 72 472 128 HOH HOH . 
K 5 HOH A 73 473 32 HOH HOH . 
K 5 HOH A 74 474 111 HOH HOH . 
K 5 HOH A 75 475 97 HOH HOH . 
K 5 HOH A 76 476 87 HOH HOH . 
K 5 HOH A 77 477 13 HOH HOH . 
K 5 HOH A 78 478 95 HOH HOH . 
K 5 HOH A 79 479 57 HOH HOH . 
K 5 HOH A 80 480 103 HOH HOH . 
K 5 HOH A 81 481 61 HOH HOH . 
K 5 HOH A 82 482 67 HOH HOH . 
K 5 HOH A 83 483 85 HOH HOH . 
K 5 HOH A 84 484 5 HOH HOH . 
K 5 HOH A 85 485 46 HOH HOH . 
K 5 HOH A 86 486 83 HOH HOH . 
K 5 HOH A 87 487 40 HOH HOH . 
K 5 HOH A 88 488 65 HOH HOH . 
K 5 HOH A 89 489 51 HOH HOH . 
K 5 HOH A 90 490 94 HOH HOH . 
K 5 HOH A 91 491 52 HOH HOH . 
K 5 HOH A 92 492 38 HOH HOH . 
K 5 HOH A 93 493 102 HOH HOH . 
K 5 HOH A 94 494 96 HOH HOH . 
K 5 HOH A 95 495 125 HOH HOH . 
K 5 HOH A 96 496 54 HOH HOH . 
K 5 HOH A 97 497 142 HOH HOH . 
K 5 HOH A 98 498 48 HOH HOH . 
K 5 HOH A 99 499 168 HOH HOH . 
K 5 HOH A 100 500 64 HOH HOH . 
K 5 HOH A 101 501 45 HOH HOH . 
K 5 HOH A 102 502 86 HOH HOH . 
K 5 HOH A 103 503 131 HOH HOH . 
K 5 HOH A 104 504 166 HOH HOH . 
K 5 HOH A 105 505 91 HOH HOH . 
K 5 HOH A 106 506 175 HOH HOH . 
K 5 HOH A 107 507 119 HOH HOH . 
K 5 HOH A 108 508 79 HOH HOH . 
K 5 HOH A 109 509 60 HOH HOH . 
K 5 HOH A 110 510 183 HOH HOH . 
K 5 HOH A 111 511 23 HOH HOH . 
K 5 HOH A 112 512 84 HOH HOH . 
K 5 HOH A 113 513 42 HOH HOH . 
K 5 HOH A 114 514 34 HOH HOH . 
K 5 HOH A 115 515 197 HOH HOH . 
K 5 HOH A 116 516 138 HOH HOH . 
K 5 HOH A 117 517 53 HOH HOH . 
K 5 HOH A 118 518 33 HOH HOH . 
K 5 HOH A 119 519 121 HOH HOH . 
K 5 HOH A 120 520 110 HOH HOH . 
K 5 HOH A 121 521 109 HOH HOH . 
K 5 HOH A 122 522 198 HOH HOH . 
K 5 HOH A 123 523 112 HOH HOH . 
K 5 HOH A 124 524 133 HOH HOH . 
K 5 HOH A 125 525 191 HOH HOH . 
K 5 HOH A 126 526 105 HOH HOH . 
K 5 HOH A 127 527 206 HOH HOH . 
K 5 HOH A 128 528 115 HOH HOH . 
K 5 HOH A 129 529 140 HOH HOH . 
K 5 HOH A 130 530 171 HOH HOH . 
K 5 HOH A 131 531 74 HOH HOH . 
K 5 HOH A 132 532 155 HOH HOH . 
K 5 HOH A 133 533 98 HOH HOH . 
K 5 HOH A 134 534 130 HOH HOH . 
K 5 HOH A 135 535 129 HOH HOH . 
K 5 HOH A 136 536 136 HOH HOH . 
K 5 HOH A 137 537 116 HOH HOH . 
K 5 HOH A 138 538 190 HOH HOH . 
K 5 HOH A 139 539 149 HOH HOH . 
K 5 HOH A 140 540 147 HOH HOH . 
K 5 HOH A 141 541 135 HOH HOH . 
K 5 HOH A 142 542 205 HOH HOH . 
K 5 HOH A 143 543 113 HOH HOH . 
K 5 HOH A 144 544 153 HOH HOH . 
K 5 HOH A 145 545 66 HOH HOH . 
K 5 HOH A 146 546 203 HOH HOH . 
K 5 HOH A 147 547 186 HOH HOH . 
K 5 HOH A 148 548 192 HOH HOH . 
K 5 HOH A 149 549 88 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . D 3 61.819 -37.067 -12.078 1 46.2 ? C TRS 303 A 1 
HETATM 2 C C1 TRS . . . D 3 61.291 -37.845 -13.276 1 42.77 ? C1 TRS 303 A 1 
HETATM 3 C C2 TRS . . . D 3 62.635 -35.881 -12.571 1 48.53 ? C2 TRS 303 A 1 
HETATM 4 C C3 TRS . . . D 3 62.675 -37.956 -11.184 1 52.79 ? C3 TRS 303 A 1 
HETATM 5 N N TRS . . . D 3 60.686 -36.557 -11.298 1 48.26 ? N TRS 303 A 1 
HETATM 6 O O1 TRS . . . D 3 60.399 -38.849 -12.851 1 41.14 ? O1 TRS 303 A 1 
HETATM 7 O O2 TRS . . . D 3 62.051 -35.395 -13.758 1 49.12 ? O2 TRS 303 A 1 
HETATM 8 O O3 TRS . . . D 3 61.929 -39.078 -10.767 1 48.42 ? O3 TRS 303 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           8 
#