data_5KA7 # _model_server_result.job_id ZljXydZWvrYjoC9KfHwq6A _model_server_result.datetime_utc '2024-10-18 15:26:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ka7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 5KA7 # _exptl.entry_id 5KA7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.262 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(OXALYL-AMINO)-4,5,6,7-TETRAHYDRO-THIENO[2,3-C]PYRIDINE-3-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5KA7 _cell.length_a 88.564 _cell.length_b 88.564 _cell.length_c 104.11 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KA7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H10 N2 O5 S' _chem_comp.formula_weight 270.262 _chem_comp.id OTA _chem_comp.mon_nstd_flag . _chem_comp.name '2-(OXALYL-AMINO)-4,5,6,7-TETRAHYDRO-THIENO[2,3-C]PYRIDINE-3-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 OTA sing 250 n n N1 C6 OTA sing 251 n n N1 H1 OTA sing 252 n n C2 C3 OTA sing 253 n n C2 H21 OTA sing 254 n n C2 H22A OTA sing 255 n n C3 C4 OTA doub 256 n y C3 S13 OTA sing 257 n y C4 C5 OTA sing 258 n n C4 C15 OTA sing 259 n y C5 C6 OTA sing 260 n n C5 H51 OTA sing 261 n n C5 H52 OTA sing 262 n n C6 H61 OTA sing 263 n n C6 H62 OTA sing 264 n n S13 C14 OTA sing 265 n y C14 C15 OTA doub 266 n y C14 N19 OTA sing 267 n n C15 C16 OTA sing 268 n n C16 O17 OTA sing 269 n n C16 O18 OTA doub 270 n n O17 H17 OTA sing 271 n n N19 C20 OTA sing 272 n n N19 H19 OTA sing 273 n n C20 C21 OTA sing 274 n n C20 O24 OTA doub 275 n n C21 O22 OTA sing 276 n n C21 O23 OTA doub 277 n n O22 H22 OTA sing 278 n n # _atom_sites.entry_id 5KA7 _atom_sites.fract_transf_matrix[1][1] 0.011291 _atom_sites.fract_transf_matrix[1][2] 0.006519 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013038 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009605 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 301 1 TRS TRS . C 3 GOL A 1 302 1 GOL GOL . D 4 OTA A 1 303 1 OTA OTA . E 5 CL A 1 304 1 CL CL . F 5 CL A 1 305 2 CL CL . G 5 CL A 1 306 3 CL CL . H 5 CL A 1 307 4 CL CL . I 5 CL A 1 308 5 CL CL . J 6 HOH A 1 401 81 HOH HOH . J 6 HOH A 2 402 65 HOH HOH . J 6 HOH A 3 403 313 HOH HOH . J 6 HOH A 4 404 128 HOH HOH . J 6 HOH A 5 405 92 HOH HOH . J 6 HOH A 6 406 114 HOH HOH . J 6 HOH A 7 407 15 HOH HOH . J 6 HOH A 8 408 40 HOH HOH . J 6 HOH A 9 409 5 HOH HOH . J 6 HOH A 10 410 56 HOH HOH . J 6 HOH A 11 411 48 HOH HOH . J 6 HOH A 12 412 118 HOH HOH . J 6 HOH A 13 413 94 HOH HOH . J 6 HOH A 14 414 207 HOH HOH . J 6 HOH A 15 415 312 HOH HOH . J 6 HOH A 16 416 50 HOH HOH . J 6 HOH A 17 417 52 HOH HOH . J 6 HOH A 18 418 306 HOH HOH . J 6 HOH A 19 419 132 HOH HOH . J 6 HOH A 20 420 159 HOH HOH . J 6 HOH A 21 421 23 HOH HOH . J 6 HOH A 22 422 85 HOH HOH . J 6 HOH A 23 423 305 HOH HOH . J 6 HOH A 24 424 24 HOH HOH . J 6 HOH A 25 425 28 HOH HOH . J 6 HOH A 26 426 84 HOH HOH . J 6 HOH A 27 427 18 HOH HOH . J 6 HOH A 28 428 90 HOH HOH . J 6 HOH A 29 429 21 HOH HOH . J 6 HOH A 30 430 41 HOH HOH . J 6 HOH A 31 431 162 HOH HOH . J 6 HOH A 32 432 78 HOH HOH . J 6 HOH A 33 433 22 HOH HOH . J 6 HOH A 34 434 35 HOH HOH . J 6 HOH A 35 435 26 HOH HOH . J 6 HOH A 36 436 29 HOH HOH . J 6 HOH A 37 437 76 HOH HOH . J 6 HOH A 38 438 70 HOH HOH . J 6 HOH A 39 439 4 HOH HOH . J 6 HOH A 40 440 80 HOH HOH . J 6 HOH A 41 441 30 HOH HOH . J 6 HOH A 42 442 59 HOH HOH . J 6 HOH A 43 443 111 HOH HOH . J 6 HOH A 44 444 31 HOH HOH . J 6 HOH A 45 445 320 HOH HOH . J 6 HOH A 46 446 179 HOH HOH . J 6 HOH A 47 447 62 HOH HOH . J 6 HOH A 48 448 87 HOH HOH . J 6 HOH A 49 449 318 HOH HOH . J 6 HOH A 50 450 145 HOH HOH . J 6 HOH A 51 451 55 HOH HOH . J 6 HOH A 52 452 74 HOH HOH . J 6 HOH A 53 453 153 HOH HOH . J 6 HOH A 54 454 36 HOH HOH . J 6 HOH A 55 455 125 HOH HOH . J 6 HOH A 56 456 100 HOH HOH . J 6 HOH A 57 457 19 HOH HOH . J 6 HOH A 58 458 8 HOH HOH . J 6 HOH A 59 459 309 HOH HOH . J 6 HOH A 60 460 96 HOH HOH . J 6 HOH A 61 461 46 HOH HOH . J 6 HOH A 62 462 37 HOH HOH . J 6 HOH A 63 463 47 HOH HOH . J 6 HOH A 64 464 12 HOH HOH . J 6 HOH A 65 465 256 HOH HOH . J 6 HOH A 66 466 51 HOH HOH . J 6 HOH A 67 467 155 HOH HOH . J 6 HOH A 68 468 11 HOH HOH . J 6 HOH A 69 469 68 HOH HOH . J 6 HOH A 70 470 73 HOH HOH . J 6 HOH A 71 471 53 HOH HOH . J 6 HOH A 72 472 13 HOH HOH . J 6 HOH A 73 473 116 HOH HOH . J 6 HOH A 74 474 39 HOH HOH . J 6 HOH A 75 475 34 HOH HOH . J 6 HOH A 76 476 16 HOH HOH . J 6 HOH A 77 477 25 HOH HOH . J 6 HOH A 78 478 27 HOH HOH . J 6 HOH A 79 479 123 HOH HOH . J 6 HOH A 80 480 60 HOH HOH . J 6 HOH A 81 481 93 HOH HOH . J 6 HOH A 82 482 75 HOH HOH . J 6 HOH A 83 483 43 HOH HOH . J 6 HOH A 84 484 110 HOH HOH . J 6 HOH A 85 485 225 HOH HOH . J 6 HOH A 86 486 71 HOH HOH . J 6 HOH A 87 487 106 HOH HOH . J 6 HOH A 88 488 105 HOH HOH . J 6 HOH A 89 489 308 HOH HOH . J 6 HOH A 90 490 14 HOH HOH . J 6 HOH A 91 491 9 HOH HOH . J 6 HOH A 92 492 33 HOH HOH . J 6 HOH A 93 493 140 HOH HOH . J 6 HOH A 94 494 63 HOH HOH . J 6 HOH A 95 495 64 HOH HOH . J 6 HOH A 96 496 97 HOH HOH . J 6 HOH A 97 497 219 HOH HOH . J 6 HOH A 98 498 108 HOH HOH . J 6 HOH A 99 499 61 HOH HOH . J 6 HOH A 100 500 66 HOH HOH . J 6 HOH A 101 501 109 HOH HOH . J 6 HOH A 102 502 20 HOH HOH . J 6 HOH A 103 503 72 HOH HOH . J 6 HOH A 104 504 79 HOH HOH . J 6 HOH A 105 505 129 HOH HOH . J 6 HOH A 106 506 245 HOH HOH . J 6 HOH A 107 507 45 HOH HOH . J 6 HOH A 108 508 203 HOH HOH . J 6 HOH A 109 509 42 HOH HOH . J 6 HOH A 110 510 315 HOH HOH . J 6 HOH A 111 511 77 HOH HOH . J 6 HOH A 112 512 88 HOH HOH . J 6 HOH A 113 513 139 HOH HOH . J 6 HOH A 114 514 147 HOH HOH . J 6 HOH A 115 515 89 HOH HOH . J 6 HOH A 116 516 215 HOH HOH . J 6 HOH A 117 517 67 HOH HOH . J 6 HOH A 118 518 58 HOH HOH . J 6 HOH A 119 519 69 HOH HOH . J 6 HOH A 120 520 201 HOH HOH . J 6 HOH A 121 521 168 HOH HOH . J 6 HOH A 122 522 217 HOH HOH . J 6 HOH A 123 523 142 HOH HOH . J 6 HOH A 124 524 54 HOH HOH . J 6 HOH A 125 525 169 HOH HOH . J 6 HOH A 126 526 44 HOH HOH . J 6 HOH A 127 527 316 HOH HOH . J 6 HOH A 128 528 236 HOH HOH . J 6 HOH A 129 529 135 HOH HOH . J 6 HOH A 130 530 310 HOH HOH . J 6 HOH A 131 531 120 HOH HOH . J 6 HOH A 132 532 122 HOH HOH . J 6 HOH A 133 533 292 HOH HOH . J 6 HOH A 134 534 98 HOH HOH . J 6 HOH A 135 535 210 HOH HOH . J 6 HOH A 136 536 150 HOH HOH . J 6 HOH A 137 537 156 HOH HOH . J 6 HOH A 138 538 95 HOH HOH . J 6 HOH A 139 539 307 HOH HOH . J 6 HOH A 140 540 134 HOH HOH . J 6 HOH A 141 541 244 HOH HOH . J 6 HOH A 142 542 152 HOH HOH . J 6 HOH A 143 543 166 HOH HOH . J 6 HOH A 144 544 183 HOH HOH . J 6 HOH A 145 545 173 HOH HOH . J 6 HOH A 146 546 249 HOH HOH . J 6 HOH A 147 547 127 HOH HOH . J 6 HOH A 148 548 82 HOH HOH . J 6 HOH A 149 549 83 HOH HOH . J 6 HOH A 150 550 154 HOH HOH . J 6 HOH A 151 551 196 HOH HOH . J 6 HOH A 152 552 91 HOH HOH . J 6 HOH A 153 553 317 HOH HOH . J 6 HOH A 154 554 115 HOH HOH . J 6 HOH A 155 555 209 HOH HOH . J 6 HOH A 156 556 258 HOH HOH . J 6 HOH A 157 557 206 HOH HOH . J 6 HOH A 158 558 49 HOH HOH . J 6 HOH A 159 559 104 HOH HOH . J 6 HOH A 160 560 177 HOH HOH . J 6 HOH A 161 561 86 HOH HOH . J 6 HOH A 162 562 255 HOH HOH . J 6 HOH A 163 563 175 HOH HOH . J 6 HOH A 164 564 226 HOH HOH . J 6 HOH A 165 565 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 OTA . . . D 4 -42.589 10.453 0.039 1 24.53 ? N1 OTA 303 A 1 HETATM 2 C C2 OTA . . . D 4 -42.369 10.737 1.451 1 26.11 ? C2 OTA 303 A 1 HETATM 3 C C3 OTA . . . D 4 -42.758 12.125 1.957 1 26.65 ? C3 OTA 303 A 1 HETATM 4 C C4 OTA . . . D 4 -43.559 12.895 1.06 1 24.33 ? C4 OTA 303 A 1 HETATM 5 C C5 OTA . . . D 4 -44.03 12.391 -0.26 1 27.04 ? C5 OTA 303 A 1 HETATM 6 C C6 OTA . . . D 4 -43.855 10.95 -0.492 1 22.07 ? C6 OTA 303 A 1 HETATM 7 S S13 OTA . . . D 4 -42.42 12.949 3.275 1 22.96 ? S13 OTA 303 A 1 HETATM 8 C C14 OTA . . . D 4 -43.202 14.295 2.998 1 27.57 ? C14 OTA 303 A 1 HETATM 9 C C15 OTA . . . D 4 -43.837 14.276 1.743 1 26.31 ? C15 OTA 303 A 1 HETATM 10 C C16 OTA . . . D 4 -44.668 15.439 1.112 1 27.88 ? C16 OTA 303 A 1 HETATM 11 O O17 OTA . . . D 4 -45.117 16.38 1.883 1 24.44 ? O17 OTA 303 A 1 HETATM 12 O O18 OTA . . . D 4 -44.883 15.459 -0.133 1 23.97 ? O18 OTA 303 A 1 HETATM 13 N N19 OTA . . . D 4 -43.356 15.478 3.76 1 20.87 ? N19 OTA 303 A 1 HETATM 14 C C20 OTA . . . D 4 -42.818 15.663 5.033 1 23.35 ? C20 OTA 303 A 1 HETATM 15 C C21 OTA . . . D 4 -43.132 17.018 5.62 1 21.6 ? C21 OTA 303 A 1 HETATM 16 O O22 OTA . . . D 4 -42.2 17.653 6.224 1 22.89 ? O22 OTA 303 A 1 HETATM 17 O O23 OTA . . . D 4 -44.268 17.49 5.401 1 20.86 ? O23 OTA 303 A 1 HETATM 18 O O24 OTA . . . D 4 -42.121 14.811 5.616 1 21.73 ? O24 OTA 303 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #