data_5KBK # _model_server_result.job_id FNtGUKSAAUTxOGTlGPK5pA _model_server_result.datetime_utc '2024-10-19 17:21:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kbk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 5KBK # _exptl.entry_id 5KBK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KBK _cell.length_a 34.33 _cell.length_b 40.614 _cell.length_c 101.911 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KBK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 65 A CYS 87 1_555 A SG CYS 140 A CYS 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc1 A ND1 HIS 53 A HIS 75 1_555 B CU CU1 . A CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc2 A NE2 HIS 55 A HIS 77 1_555 B CU CU1 . A CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc3 A NE2 HIS 131 A HIS 153 1_555 B CU CU1 . A CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 271 n n S O2 SO4 doub 272 n n S O3 SO4 sing 273 n n S O4 SO4 sing 274 n n # _atom_sites.entry_id 5KBK _atom_sites.fract_transf_matrix[1][1] 0.029129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024622 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU1 A 1 201 201 CU1 CU1 . C 3 SO4 A 1 202 301 SO4 SO4 . D 3 SO4 A 1 203 302 SO4 SO4 . E 3 SO4 A 1 204 303 SO4 SO4 . F 4 HOH A 1 301 217 HOH HOH . F 4 HOH A 2 302 8 HOH HOH . F 4 HOH A 3 303 116 HOH HOH . F 4 HOH A 4 304 27 HOH HOH . F 4 HOH A 5 305 119 HOH HOH . F 4 HOH A 6 306 185 HOH HOH . F 4 HOH A 7 307 38 HOH HOH . F 4 HOH A 8 308 82 HOH HOH . F 4 HOH A 9 309 114 HOH HOH . F 4 HOH A 10 310 101 HOH HOH . F 4 HOH A 11 311 47 HOH HOH . F 4 HOH A 12 312 176 HOH HOH . F 4 HOH A 13 313 81 HOH HOH . F 4 HOH A 14 314 21 HOH HOH . F 4 HOH A 15 315 122 HOH HOH . F 4 HOH A 16 316 66 HOH HOH . F 4 HOH A 17 317 173 HOH HOH . F 4 HOH A 18 318 32 HOH HOH . F 4 HOH A 19 319 207 HOH HOH . F 4 HOH A 20 320 168 HOH HOH . F 4 HOH A 21 321 123 HOH HOH . F 4 HOH A 22 322 124 HOH HOH . F 4 HOH A 23 323 51 HOH HOH . F 4 HOH A 24 324 202 HOH HOH . F 4 HOH A 25 325 154 HOH HOH . F 4 HOH A 26 326 42 HOH HOH . F 4 HOH A 27 327 174 HOH HOH . F 4 HOH A 28 328 10 HOH HOH . F 4 HOH A 29 329 112 HOH HOH . F 4 HOH A 30 330 20 HOH HOH . F 4 HOH A 31 331 121 HOH HOH . F 4 HOH A 32 332 15 HOH HOH . F 4 HOH A 33 333 135 HOH HOH . F 4 HOH A 34 334 83 HOH HOH . F 4 HOH A 35 335 55 HOH HOH . F 4 HOH A 36 336 182 HOH HOH . F 4 HOH A 37 337 59 HOH HOH . F 4 HOH A 38 338 25 HOH HOH . F 4 HOH A 39 339 78 HOH HOH . F 4 HOH A 40 340 111 HOH HOH . F 4 HOH A 41 341 61 HOH HOH . F 4 HOH A 42 342 2 HOH HOH . F 4 HOH A 43 343 93 HOH HOH . F 4 HOH A 44 344 4 HOH HOH . F 4 HOH A 45 345 64 HOH HOH . F 4 HOH A 46 346 117 HOH HOH . F 4 HOH A 47 347 11 HOH HOH . F 4 HOH A 48 348 140 HOH HOH . F 4 HOH A 49 349 60 HOH HOH . F 4 HOH A 50 350 85 HOH HOH . F 4 HOH A 51 351 57 HOH HOH . F 4 HOH A 52 352 43 HOH HOH . F 4 HOH A 53 353 31 HOH HOH . F 4 HOH A 54 354 165 HOH HOH . F 4 HOH A 55 355 143 HOH HOH . F 4 HOH A 56 356 17 HOH HOH . F 4 HOH A 57 357 26 HOH HOH . F 4 HOH A 58 358 12 HOH HOH . F 4 HOH A 59 359 136 HOH HOH . F 4 HOH A 60 360 34 HOH HOH . F 4 HOH A 61 361 215 HOH HOH . F 4 HOH A 62 362 7 HOH HOH . F 4 HOH A 63 363 6 HOH HOH . F 4 HOH A 64 364 5 HOH HOH . F 4 HOH A 65 365 113 HOH HOH . F 4 HOH A 66 366 92 HOH HOH . F 4 HOH A 67 367 9 HOH HOH . F 4 HOH A 68 368 106 HOH HOH . F 4 HOH A 69 369 75 HOH HOH . F 4 HOH A 70 370 149 HOH HOH . F 4 HOH A 71 371 44 HOH HOH . F 4 HOH A 72 372 184 HOH HOH . F 4 HOH A 73 373 167 HOH HOH . F 4 HOH A 74 374 187 HOH HOH . F 4 HOH A 75 375 1 HOH HOH . F 4 HOH A 76 376 62 HOH HOH . F 4 HOH A 77 377 127 HOH HOH . F 4 HOH A 78 378 77 HOH HOH . F 4 HOH A 79 379 68 HOH HOH . F 4 HOH A 80 380 23 HOH HOH . F 4 HOH A 81 381 16 HOH HOH . F 4 HOH A 82 382 158 HOH HOH . F 4 HOH A 83 383 36 HOH HOH . F 4 HOH A 84 384 70 HOH HOH . F 4 HOH A 85 385 210 HOH HOH . F 4 HOH A 86 386 99 HOH HOH . F 4 HOH A 87 387 35 HOH HOH . F 4 HOH A 88 388 107 HOH HOH . F 4 HOH A 89 389 151 HOH HOH . F 4 HOH A 90 390 24 HOH HOH . F 4 HOH A 91 391 159 HOH HOH . F 4 HOH A 92 392 49 HOH HOH . F 4 HOH A 93 393 142 HOH HOH . F 4 HOH A 94 394 84 HOH HOH . F 4 HOH A 95 395 46 HOH HOH . F 4 HOH A 96 396 198 HOH HOH . F 4 HOH A 97 397 13 HOH HOH . F 4 HOH A 98 398 108 HOH HOH . F 4 HOH A 99 399 169 HOH HOH . F 4 HOH A 100 400 65 HOH HOH . F 4 HOH A 101 401 39 HOH HOH . F 4 HOH A 102 402 105 HOH HOH . F 4 HOH A 103 403 3 HOH HOH . F 4 HOH A 104 404 69 HOH HOH . F 4 HOH A 105 405 18 HOH HOH . F 4 HOH A 106 406 193 HOH HOH . F 4 HOH A 107 407 181 HOH HOH . F 4 HOH A 108 408 218 HOH HOH . F 4 HOH A 109 409 137 HOH HOH . F 4 HOH A 110 410 89 HOH HOH . F 4 HOH A 111 411 166 HOH HOH . F 4 HOH A 112 412 134 HOH HOH . F 4 HOH A 113 413 179 HOH HOH . F 4 HOH A 114 414 109 HOH HOH . F 4 HOH A 115 415 22 HOH HOH . F 4 HOH A 116 416 79 HOH HOH . F 4 HOH A 117 417 216 HOH HOH . F 4 HOH A 118 418 197 HOH HOH . F 4 HOH A 119 419 200 HOH HOH . F 4 HOH A 120 420 28 HOH HOH . F 4 HOH A 121 421 14 HOH HOH . F 4 HOH A 122 422 74 HOH HOH . F 4 HOH A 123 423 29 HOH HOH . F 4 HOH A 124 424 72 HOH HOH . F 4 HOH A 125 425 53 HOH HOH . F 4 HOH A 126 426 19 HOH HOH . F 4 HOH A 127 427 138 HOH HOH . F 4 HOH A 128 428 67 HOH HOH . F 4 HOH A 129 429 54 HOH HOH . F 4 HOH A 130 430 190 HOH HOH . F 4 HOH A 131 431 141 HOH HOH . F 4 HOH A 132 432 71 HOH HOH . F 4 HOH A 133 433 125 HOH HOH . F 4 HOH A 134 434 201 HOH HOH . F 4 HOH A 135 435 96 HOH HOH . F 4 HOH A 136 436 58 HOH HOH . F 4 HOH A 137 437 63 HOH HOH . F 4 HOH A 138 438 98 HOH HOH . F 4 HOH A 139 439 192 HOH HOH . F 4 HOH A 140 440 212 HOH HOH . F 4 HOH A 141 441 94 HOH HOH . F 4 HOH A 142 442 33 HOH HOH . F 4 HOH A 143 443 48 HOH HOH . F 4 HOH A 144 444 45 HOH HOH . F 4 HOH A 145 445 88 HOH HOH . F 4 HOH A 146 446 30 HOH HOH . F 4 HOH A 147 447 80 HOH HOH . F 4 HOH A 148 448 76 HOH HOH . F 4 HOH A 149 449 163 HOH HOH . F 4 HOH A 150 450 180 HOH HOH . F 4 HOH A 151 451 115 HOH HOH . F 4 HOH A 152 452 164 HOH HOH . F 4 HOH A 153 453 50 HOH HOH . F 4 HOH A 154 454 194 HOH HOH . F 4 HOH A 155 455 126 HOH HOH . F 4 HOH A 156 456 203 HOH HOH . F 4 HOH A 157 457 161 HOH HOH . F 4 HOH A 158 458 211 HOH HOH . F 4 HOH A 159 459 103 HOH HOH . F 4 HOH A 160 460 90 HOH HOH . F 4 HOH A 161 461 95 HOH HOH . F 4 HOH A 162 462 147 HOH HOH . F 4 HOH A 163 463 148 HOH HOH . F 4 HOH A 164 464 150 HOH HOH . F 4 HOH A 165 465 37 HOH HOH . F 4 HOH A 166 466 183 HOH HOH . F 4 HOH A 167 467 156 HOH HOH . F 4 HOH A 168 468 219 HOH HOH . F 4 HOH A 169 469 191 HOH HOH . F 4 HOH A 170 470 52 HOH HOH . F 4 HOH A 171 471 146 HOH HOH . F 4 HOH A 172 472 178 HOH HOH . F 4 HOH A 173 473 220 HOH HOH . F 4 HOH A 174 474 128 HOH HOH . F 4 HOH A 175 475 41 HOH HOH . F 4 HOH A 176 476 100 HOH HOH . F 4 HOH A 177 477 171 HOH HOH . F 4 HOH A 178 478 162 HOH HOH . F 4 HOH A 179 479 189 HOH HOH . F 4 HOH A 180 480 139 HOH HOH . F 4 HOH A 181 481 172 HOH HOH . F 4 HOH A 182 482 87 HOH HOH . F 4 HOH A 183 483 196 HOH HOH . F 4 HOH A 184 484 120 HOH HOH . F 4 HOH A 185 485 40 HOH HOH . F 4 HOH A 186 486 144 HOH HOH . F 4 HOH A 187 487 214 HOH HOH . F 4 HOH A 188 488 186 HOH HOH . F 4 HOH A 189 489 104 HOH HOH . F 4 HOH A 190 490 131 HOH HOH . F 4 HOH A 191 491 110 HOH HOH . F 4 HOH A 192 492 213 HOH HOH . F 4 HOH A 193 493 133 HOH HOH . F 4 HOH A 194 494 209 HOH HOH . F 4 HOH A 195 495 118 HOH HOH . F 4 HOH A 196 496 175 HOH HOH . F 4 HOH A 197 497 130 HOH HOH . F 4 HOH A 198 498 188 HOH HOH . F 4 HOH A 199 499 205 HOH HOH . F 4 HOH A 200 500 86 HOH HOH . F 4 HOH A 201 501 157 HOH HOH . F 4 HOH A 202 502 102 HOH HOH . F 4 HOH A 203 503 195 HOH HOH . F 4 HOH A 204 504 155 HOH HOH . F 4 HOH A 205 505 204 HOH HOH . F 4 HOH A 206 506 56 HOH HOH . F 4 HOH A 207 507 91 HOH HOH . F 4 HOH A 208 508 160 HOH HOH . F 4 HOH A 209 509 153 HOH HOH . F 4 HOH A 210 510 199 HOH HOH . F 4 HOH A 211 511 145 HOH HOH . F 4 HOH A 212 512 170 HOH HOH . F 4 HOH A 213 513 132 HOH HOH . F 4 HOH A 214 514 208 HOH HOH . F 4 HOH A 215 515 97 HOH HOH . F 4 HOH A 216 516 152 HOH HOH . F 4 HOH A 217 517 129 HOH HOH . F 4 HOH A 218 518 206 HOH HOH . F 4 HOH A 219 519 73 HOH HOH . F 4 HOH A 220 520 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 3 -6.582 -1.097 -1.171 1 59.86 ? S SO4 204 A 1 HETATM 2 O O1 SO4 . . . E 3 -6.668 -0.644 -2.557 1 59.92 ? O1 SO4 204 A 1 HETATM 3 O O2 SO4 . . . E 3 -6.043 -2.455 -1.141 1 60.51 ? O2 SO4 204 A 1 HETATM 4 O O3 SO4 . . . E 3 -7.909 -1.088 -0.568 1 59.58 ? O3 SO4 204 A 1 HETATM 5 O O4 SO4 . . . E 3 -5.7 -0.213 -0.415 1 59.91 ? O4 SO4 204 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #