data_5KBQ # _model_server_result.job_id caeCODXgR7FT-z46WuVCyw _model_server_result.datetime_utc '2024-12-26 19:13:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kbq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 5KBQ # _exptl.entry_id 5KBQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 483.583 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-methyl-3-[methyl-[2-[(3-methylsulfonyl-5-morpholin-4-yl-phenyl)amino]pyrimidin-4-yl]amino]phenyl]methanol' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.07 _cell.angle_gamma 90 _cell.entry_id 5KBQ _cell.length_a 61.911 _cell.length_b 80.94 _cell.length_c 66.022 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KBQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H29 N5 O4 S' _chem_comp.formula_weight 483.583 _chem_comp.id IPV _chem_comp.mon_nstd_flag . _chem_comp.name '[4-methyl-3-[methyl-[2-[(3-methylsulfonyl-5-morpholin-4-yl-phenyl)amino]pyrimidin-4-yl]amino]phenyl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O S IPV doub 173 n n C18 S IPV sing 174 n n S O1 IPV doub 175 n n S C16 IPV sing 176 n n C17 C16 IPV doub 177 n y C17 C12 IPV sing 178 n y N1 C10 IPV doub 179 n y N1 C11 IPV sing 180 n y C16 C15 IPV sing 181 n y N3 C12 IPV sing 182 n n N3 C11 IPV sing 183 n n C12 C13 IPV doub 184 n y C10 C9 IPV sing 185 n y C11 N2 IPV doub 186 n y C15 C14 IPV doub 187 n y C13 C14 IPV sing 188 n y C9 C8 IPV doub 189 n y N2 C8 IPV sing 190 n y C14 N4 IPV sing 191 n n C8 N IPV sing 192 n n C22 N4 IPV sing 193 n n C22 C21 IPV sing 194 n n N4 C19 IPV sing 195 n n N C7 IPV sing 196 n n N C6 IPV sing 197 n n C21 O2 IPV sing 198 n n C19 C20 IPV sing 199 n n C6 C5 IPV doub 200 n y C6 C1 IPV sing 201 n y C5 C4 IPV sing 202 n y O2 C20 IPV sing 203 n n C1 C IPV sing 204 n n C1 C2 IPV doub 205 n y C4 C23 IPV sing 206 n n C4 C3 IPV doub 207 n y C23 O3 IPV sing 208 n n C2 C3 IPV sing 209 n y C2 H1 IPV sing 210 n n C3 H2 IPV sing 211 n n C7 H3 IPV sing 212 n n C7 H4 IPV sing 213 n n C7 H5 IPV sing 214 n n C9 H6 IPV sing 215 n n C10 H7 IPV sing 216 n n C13 H8 IPV sing 217 n n C15 H9 IPV sing 218 n n C19 H10 IPV sing 219 n n C19 H11 IPV sing 220 n n C20 H12 IPV sing 221 n n C20 H13 IPV sing 222 n n C21 H14 IPV sing 223 n n C21 H15 IPV sing 224 n n C22 H16 IPV sing 225 n n C22 H17 IPV sing 226 n n C18 H18 IPV sing 227 n n C18 H19 IPV sing 228 n n C18 H20 IPV sing 229 n n C17 H21 IPV sing 230 n n N3 H22 IPV sing 231 n n C H23 IPV sing 232 n n C H24 IPV sing 233 n n C H25 IPV sing 234 n n C5 H26 IPV sing 235 n n C23 H27 IPV sing 236 n n C23 H28 IPV sing 237 n n O3 H29 IPV sing 238 n n # _atom_sites.entry_id 5KBQ _atom_sites.fract_transf_matrix[1][1] 0.016152 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00496 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012355 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015844 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IPV A 1 601 1 IPV INH . D 3 HOH A 1 701 12 HOH HOH . D 3 HOH A 2 702 2 HOH HOH . D 3 HOH A 3 703 42 HOH HOH . D 3 HOH A 4 704 25 HOH HOH . D 3 HOH A 5 705 3 HOH HOH . D 3 HOH A 6 706 9 HOH HOH . D 3 HOH A 7 707 4 HOH HOH . D 3 HOH A 8 708 45 HOH HOH . D 3 HOH A 9 709 17 HOH HOH . D 3 HOH A 10 710 46 HOH HOH . D 3 HOH A 11 711 34 HOH HOH . D 3 HOH A 12 712 47 HOH HOH . D 3 HOH A 13 713 24 HOH HOH . D 3 HOH A 14 714 43 HOH HOH . D 3 HOH A 15 715 32 HOH HOH . D 3 HOH A 16 716 44 HOH HOH . D 3 HOH A 17 717 26 HOH HOH . E 3 HOH B 1 601 11 HOH HOH . E 3 HOH B 2 602 28 HOH HOH . E 3 HOH B 3 603 7 HOH HOH . E 3 HOH B 4 604 22 HOH HOH . E 3 HOH B 5 605 5 HOH HOH . E 3 HOH B 6 606 14 HOH HOH . E 3 HOH B 7 607 20 HOH HOH . E 3 HOH B 8 608 50 HOH HOH . E 3 HOH B 9 609 30 HOH HOH . E 3 HOH B 10 610 1 HOH HOH . E 3 HOH B 11 611 37 HOH HOH . E 3 HOH B 12 612 29 HOH HOH . E 3 HOH B 13 613 41 HOH HOH . E 3 HOH B 14 614 49 HOH HOH . E 3 HOH B 15 615 40 HOH HOH . E 3 HOH B 16 616 39 HOH HOH . E 3 HOH B 17 617 27 HOH HOH . E 3 HOH B 18 618 23 HOH HOH . E 3 HOH B 19 619 10 HOH HOH . E 3 HOH B 20 620 16 HOH HOH . E 3 HOH B 21 621 48 HOH HOH . E 3 HOH B 22 622 38 HOH HOH . E 3 HOH B 23 623 36 HOH HOH . E 3 HOH B 24 624 33 HOH HOH . E 3 HOH B 25 625 8 HOH HOH . E 3 HOH B 26 626 31 HOH HOH . E 3 HOH B 27 627 19 HOH HOH . E 3 HOH B 28 628 13 HOH HOH . E 3 HOH B 29 629 18 HOH HOH . E 3 HOH B 30 630 21 HOH HOH . E 3 HOH B 31 631 15 HOH HOH . E 3 HOH B 32 632 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPV . . . C 2 2.806 -33.725 19.659 1 72.44 ? C1 IPV 601 A 1 HETATM 2 C C2 IPV . . . C 2 1.684 -33.947 20.455 1 69.78 ? C2 IPV 601 A 1 HETATM 3 C C3 IPV . . . C 2 0.657 -33.028 20.537 1 68.59 ? C3 IPV 601 A 1 HETATM 4 C C7 IPV . . . C 2 4.886 -31.175 18.513 1 68.3 ? C7 IPV 601 A 1 HETATM 5 C C8 IPV . . . C 2 4.217 -32.887 16.813 1 71.65 ? C8 IPV 601 A 1 HETATM 6 C C9 IPV . . . C 2 3.252 -33.671 16.188 1 72.03 ? C9 IPV 601 A 1 HETATM 7 C C10 IPV . . . C 2 3.614 -34.214 14.972 1 74.23 ? C10 IPV 601 A 1 HETATM 8 C C11 IPV . . . C 2 5.662 -33.233 15.081 1 76.85 ? C11 IPV 601 A 1 HETATM 9 C C12 IPV . . . C 2 8.001 -32.21 14.795 1 85.83 ? C12 IPV 601 A 1 HETATM 10 C C13 IPV . . . C 2 8.012 -31.414 15.938 1 87.73 ? C13 IPV 601 A 1 HETATM 11 C C14 IPV . . . C 2 9.171 -30.716 16.287 1 91.28 ? C14 IPV 601 A 1 HETATM 12 C C15 IPV . . . C 2 10.317 -30.862 15.504 1 92.49 ? C15 IPV 601 A 1 HETATM 13 C C16 IPV . . . C 2 10.299 -31.653 14.368 1 95.58 ? C16 IPV 601 A 1 HETATM 14 C C19 IPV . . . C 2 9.606 -30.315 18.666 1 97.16 ? C19 IPV 601 A 1 HETATM 15 C C20 IPV . . . C 2 10.014 -29.129 19.514 1 101.76 ? C20 IPV 601 A 1 HETATM 16 C C21 IPV . . . C 2 8.567 -27.693 18.328 1 102.58 ? C21 IPV 601 A 1 HETATM 17 C C22 IPV . . . C 2 8.114 -28.822 17.428 1 97.82 ? C22 IPV 601 A 1 HETATM 18 O O1 IPV . . . C 2 12.832 -32.254 14.298 1 107.35 ? O1 IPV 601 A 1 HETATM 19 S S IPV . . . C 2 11.776 -31.85 13.414 1 105.04 ? S IPV 601 A 1 HETATM 20 O O IPV . . . C 2 11.48 -32.693 12.292 1 106.96 ? O IPV 601 A 1 HETATM 21 C C18 IPV . . . C 2 12.133 -30.241 12.823 1 105.52 ? C18 IPV 601 A 1 HETATM 22 N N4 IPV . . . C 2 9.162 -29.845 17.352 1 94.1 ? N4 IPV 601 A 1 HETATM 23 O O2 IPV . . . C 2 8.957 -28.167 19.625 1 104.21 ? O2 IPV 601 A 1 HETATM 24 C C17 IPV . . . C 2 9.139 -32.314 13.997 1 91.25 ? C17 IPV 601 A 1 HETATM 25 N N3 IPV . . . C 2 6.856 -32.975 14.487 1 80.64 ? N3 IPV 601 A 1 HETATM 26 N N1 IPV . . . C 2 4.813 -34.02 14.399 1 77.22 ? N1 IPV 601 A 1 HETATM 27 N N2 IPV . . . C 2 5.424 -32.664 16.277 1 73.46 ? N2 IPV 601 A 1 HETATM 28 N N IPV . . . C 2 3.992 -32.236 18.037 1 70.45 ? N IPV 601 A 1 HETATM 29 C C6 IPV . . . C 2 2.842 -32.545 18.896 1 71.95 ? C6 IPV 601 A 1 HETATM 30 C C IPV . . . C 2 3.95 -34.708 19.702 1 73.77 ? C IPV 601 A 1 HETATM 31 C C5 IPV . . . C 2 1.786 -31.633 18.969 1 71.36 ? C5 IPV 601 A 1 HETATM 32 C C4 IPV . . . C 2 0.698 -31.852 19.81 1 70.59 ? C4 IPV 601 A 1 HETATM 33 C C23 IPV . . . C 2 -0.348 -30.79 20.003 1 71.29 ? C23 IPV 601 A 1 HETATM 34 O O3 IPV . . . C 2 0.156 -29.647 20.677 1 71.34 ? O3 IPV 601 A 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 34 #