data_5KCF # _model_server_result.job_id TVu9tMK2_eJYJQ4isl96RQ _model_server_result.datetime_utc '2024-11-22 19:27:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kcf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5KCF # _exptl.entry_id 5KCF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 493.571 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R,2S,4R)-N-ethyl-5,6-bis(4-hydroxyphenyl)-N-(4-methoxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.19 _cell.angle_gamma 90 _cell.entry_id 5KCF _cell.length_a 54.88 _cell.length_b 81.574 _cell.length_c 58.898 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KCF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H27 N O6 S' _chem_comp.formula_weight 493.571 _chem_comp.id OB5 _chem_comp.mon_nstd_flag . _chem_comp.name (1R,2S,4R)-N-ethyl-5,6-bis(4-hydroxyphenyl)-N-(4-methoxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O02 C14 OB5 sing 303 n n C14 C13 OB5 doub 304 n y C14 C15 OB5 sing 305 n y C13 C12 OB5 sing 306 n y C12 C10 OB5 doub 307 n y C15 C16 OB5 doub 308 n y C16 C10 OB5 sing 309 n y C10 C08 OB5 sing 310 n n O01 C02 OB5 sing 311 n n C01 C02 OB5 doub 312 n y C01 C06 OB5 sing 313 n y C02 C03 OB5 sing 314 n y C08 C07 OB5 doub 315 n n C08 C09 OB5 sing 316 n n C06 C05 OB5 doub 317 n y C03 C04 OB5 doub 318 n y C05 C04 OB5 sing 319 n y C05 C07 OB5 sing 320 n n C07 C11 OB5 sing 321 n n C09 O03 OB5 sing 322 n n C09 C18 OB5 sing 323 n n O03 C11 OB5 sing 324 n n C11 C17 OB5 sing 325 n n C20 C26 OB5 sing 326 n n C20 N01 OB5 sing 327 n n C18 C17 OB5 sing 328 n n C18 S01 OB5 sing 329 n n O05 S01 OB5 doub 330 n n N01 S01 OB5 sing 331 n n N01 C19 OB5 sing 332 n n S01 O04 OB5 doub 333 n n C21 C19 OB5 doub 334 n y C21 C22 OB5 sing 335 n y C19 C25 OB5 sing 336 n y C22 C23 OB5 doub 337 n y C25 C24 OB5 doub 338 n y C23 C24 OB5 sing 339 n y C23 O06 OB5 sing 340 n n O06 C27 OB5 sing 341 n n C01 H1 OB5 sing 342 n n C03 H2 OB5 sing 343 n n C04 H3 OB5 sing 344 n n C06 H4 OB5 sing 345 n n O01 H5 OB5 sing 346 n n C09 H6 OB5 sing 347 n n C11 H7 OB5 sing 348 n n C12 H8 OB5 sing 349 n n C13 H9 OB5 sing 350 n n C15 H10 OB5 sing 351 n n C16 H11 OB5 sing 352 n n O02 H12 OB5 sing 353 n n C17 H13 OB5 sing 354 n n C17 H14 OB5 sing 355 n n C18 H15 OB5 sing 356 n n C20 H16 OB5 sing 357 n n C20 H17 OB5 sing 358 n n C21 H18 OB5 sing 359 n n C22 H19 OB5 sing 360 n n C24 H20 OB5 sing 361 n n C25 H21 OB5 sing 362 n n C26 H22 OB5 sing 363 n n C26 H23 OB5 sing 364 n n C26 H24 OB5 sing 365 n n C27 H25 OB5 sing 366 n n C27 H26 OB5 sing 367 n n C27 H27 OB5 sing 368 n n # _atom_sites.entry_id 5KCF _atom_sites.fract_transf_matrix[1][1] 0.018222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006701 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012259 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 OB5 A 1 601 1 OB5 OB5 . F 4 OB4 B 1 601 1 OB4 OB4 . G 5 HOH A 1 701 73 HOH HOH . G 5 HOH A 2 702 154 HOH HOH . G 5 HOH A 3 703 6 HOH HOH . G 5 HOH A 4 704 174 HOH HOH . G 5 HOH A 5 705 16 HOH HOH . G 5 HOH A 6 706 165 HOH HOH . G 5 HOH A 7 707 36 HOH HOH . G 5 HOH A 8 708 31 HOH HOH . G 5 HOH A 9 709 27 HOH HOH . G 5 HOH A 10 710 70 HOH HOH . G 5 HOH A 11 711 35 HOH HOH . G 5 HOH A 12 712 34 HOH HOH . G 5 HOH A 13 713 159 HOH HOH . G 5 HOH A 14 714 12 HOH HOH . G 5 HOH A 15 715 110 HOH HOH . G 5 HOH A 16 716 66 HOH HOH . G 5 HOH A 17 717 168 HOH HOH . G 5 HOH A 18 718 80 HOH HOH . G 5 HOH A 19 719 71 HOH HOH . G 5 HOH A 20 720 109 HOH HOH . G 5 HOH A 21 721 33 HOH HOH . G 5 HOH A 22 722 8 HOH HOH . G 5 HOH A 23 723 60 HOH HOH . G 5 HOH A 24 724 85 HOH HOH . G 5 HOH A 25 725 117 HOH HOH . G 5 HOH A 26 726 28 HOH HOH . G 5 HOH A 27 727 120 HOH HOH . G 5 HOH A 28 728 169 HOH HOH . G 5 HOH A 29 729 153 HOH HOH . G 5 HOH A 30 730 82 HOH HOH . G 5 HOH A 31 731 46 HOH HOH . G 5 HOH A 32 732 39 HOH HOH . G 5 HOH A 33 733 99 HOH HOH . G 5 HOH A 34 734 112 HOH HOH . G 5 HOH A 35 735 185 HOH HOH . G 5 HOH A 36 736 5 HOH HOH . G 5 HOH A 37 737 175 HOH HOH . G 5 HOH A 38 738 64 HOH HOH . G 5 HOH A 39 739 13 HOH HOH . G 5 HOH A 40 740 69 HOH HOH . G 5 HOH A 41 741 40 HOH HOH . G 5 HOH A 42 742 89 HOH HOH . G 5 HOH A 43 743 2 HOH HOH . G 5 HOH A 44 744 57 HOH HOH . G 5 HOH A 45 745 22 HOH HOH . G 5 HOH A 46 746 24 HOH HOH . G 5 HOH A 47 747 76 HOH HOH . G 5 HOH A 48 748 107 HOH HOH . G 5 HOH A 49 749 63 HOH HOH . G 5 HOH A 50 750 65 HOH HOH . G 5 HOH A 51 751 179 HOH HOH . G 5 HOH A 52 752 93 HOH HOH . G 5 HOH A 53 753 45 HOH HOH . G 5 HOH A 54 754 14 HOH HOH . G 5 HOH A 55 755 144 HOH HOH . G 5 HOH A 56 756 37 HOH HOH . G 5 HOH A 57 757 25 HOH HOH . G 5 HOH A 58 758 142 HOH HOH . G 5 HOH A 59 759 32 HOH HOH . G 5 HOH A 60 760 77 HOH HOH . G 5 HOH A 61 761 43 HOH HOH . G 5 HOH A 62 762 122 HOH HOH . G 5 HOH A 63 763 163 HOH HOH . G 5 HOH A 64 764 115 HOH HOH . G 5 HOH A 65 765 41 HOH HOH . G 5 HOH A 66 766 47 HOH HOH . G 5 HOH A 67 767 128 HOH HOH . G 5 HOH A 68 768 29 HOH HOH . G 5 HOH A 69 769 129 HOH HOH . G 5 HOH A 70 770 72 HOH HOH . G 5 HOH A 71 771 104 HOH HOH . G 5 HOH A 72 772 100 HOH HOH . G 5 HOH A 73 773 7 HOH HOH . G 5 HOH A 74 774 1 HOH HOH . G 5 HOH A 75 775 97 HOH HOH . G 5 HOH A 76 776 147 HOH HOH . G 5 HOH A 77 777 136 HOH HOH . G 5 HOH A 78 778 181 HOH HOH . G 5 HOH A 79 779 44 HOH HOH . G 5 HOH A 80 780 150 HOH HOH . G 5 HOH A 81 781 143 HOH HOH . G 5 HOH A 82 782 149 HOH HOH . G 5 HOH A 83 783 106 HOH HOH . G 5 HOH A 84 784 133 HOH HOH . G 5 HOH A 85 785 114 HOH HOH . G 5 HOH A 86 786 59 HOH HOH . G 5 HOH A 87 787 108 HOH HOH . G 5 HOH A 88 788 158 HOH HOH . G 5 HOH A 89 789 38 HOH HOH . G 5 HOH A 90 790 125 HOH HOH . G 5 HOH A 91 791 160 HOH HOH . G 5 HOH A 92 792 96 HOH HOH . G 5 HOH A 93 793 4 HOH HOH . G 5 HOH A 94 794 94 HOH HOH . G 5 HOH A 95 795 151 HOH HOH . G 5 HOH A 96 796 118 HOH HOH . G 5 HOH A 97 797 178 HOH HOH . G 5 HOH A 98 798 123 HOH HOH . G 5 HOH A 99 799 170 HOH HOH . G 5 HOH A 100 800 53 HOH HOH . H 5 HOH B 1 701 184 HOH HOH . H 5 HOH B 2 702 56 HOH HOH . H 5 HOH B 3 703 105 HOH HOH . H 5 HOH B 4 704 62 HOH HOH . H 5 HOH B 5 705 54 HOH HOH . H 5 HOH B 6 706 161 HOH HOH . H 5 HOH B 7 707 83 HOH HOH . H 5 HOH B 8 708 18 HOH HOH . H 5 HOH B 9 709 50 HOH HOH . H 5 HOH B 10 710 49 HOH HOH . H 5 HOH B 11 711 101 HOH HOH . H 5 HOH B 12 712 79 HOH HOH . H 5 HOH B 13 713 67 HOH HOH . H 5 HOH B 14 714 172 HOH HOH . H 5 HOH B 15 715 126 HOH HOH . H 5 HOH B 16 716 135 HOH HOH . H 5 HOH B 17 717 177 HOH HOH . H 5 HOH B 18 718 58 HOH HOH . H 5 HOH B 19 719 23 HOH HOH . H 5 HOH B 20 720 130 HOH HOH . H 5 HOH B 21 721 30 HOH HOH . H 5 HOH B 22 722 171 HOH HOH . H 5 HOH B 23 723 124 HOH HOH . H 5 HOH B 24 724 61 HOH HOH . H 5 HOH B 25 725 146 HOH HOH . H 5 HOH B 26 726 19 HOH HOH . H 5 HOH B 27 727 162 HOH HOH . H 5 HOH B 28 728 11 HOH HOH . H 5 HOH B 29 729 102 HOH HOH . H 5 HOH B 30 730 134 HOH HOH . H 5 HOH B 31 731 87 HOH HOH . H 5 HOH B 32 732 116 HOH HOH . H 5 HOH B 33 733 17 HOH HOH . H 5 HOH B 34 734 78 HOH HOH . H 5 HOH B 35 735 10 HOH HOH . H 5 HOH B 36 736 20 HOH HOH . H 5 HOH B 37 737 132 HOH HOH . H 5 HOH B 38 738 111 HOH HOH . H 5 HOH B 39 739 95 HOH HOH . H 5 HOH B 40 740 81 HOH HOH . H 5 HOH B 41 741 86 HOH HOH . H 5 HOH B 42 742 52 HOH HOH . H 5 HOH B 43 743 75 HOH HOH . H 5 HOH B 44 744 68 HOH HOH . H 5 HOH B 45 745 51 HOH HOH . H 5 HOH B 46 746 3 HOH HOH . H 5 HOH B 47 747 42 HOH HOH . H 5 HOH B 48 748 88 HOH HOH . H 5 HOH B 49 749 121 HOH HOH . H 5 HOH B 50 750 173 HOH HOH . H 5 HOH B 51 751 139 HOH HOH . H 5 HOH B 52 752 157 HOH HOH . H 5 HOH B 53 753 98 HOH HOH . H 5 HOH B 54 754 145 HOH HOH . H 5 HOH B 55 755 103 HOH HOH . H 5 HOH B 56 756 84 HOH HOH . H 5 HOH B 57 757 140 HOH HOH . H 5 HOH B 58 758 91 HOH HOH . H 5 HOH B 59 759 131 HOH HOH . H 5 HOH B 60 760 74 HOH HOH . H 5 HOH B 61 761 167 HOH HOH . H 5 HOH B 62 762 21 HOH HOH . H 5 HOH B 63 763 48 HOH HOH . H 5 HOH B 64 764 26 HOH HOH . H 5 HOH B 65 765 90 HOH HOH . H 5 HOH B 66 766 164 HOH HOH . H 5 HOH B 67 767 156 HOH HOH . H 5 HOH B 68 768 148 HOH HOH . H 5 HOH B 69 769 92 HOH HOH . H 5 HOH B 70 770 137 HOH HOH . H 5 HOH B 71 771 176 HOH HOH . H 5 HOH B 72 772 155 HOH HOH . H 5 HOH B 73 773 183 HOH HOH . H 5 HOH B 74 774 55 HOH HOH . H 5 HOH B 75 775 9 HOH HOH . H 5 HOH B 76 776 186 HOH HOH . H 5 HOH B 77 777 113 HOH HOH . H 5 HOH B 78 778 180 HOH HOH . H 5 HOH B 79 779 15 HOH HOH . H 5 HOH B 80 780 138 HOH HOH . I 5 HOH C 1 701 119 HOH HOH . I 5 HOH C 2 702 182 HOH HOH . J 5 HOH D 1 701 152 HOH HOH . J 5 HOH D 2 702 127 HOH HOH . J 5 HOH D 3 703 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 OB5 . . . E 3 5.717 14.493 -22.788 0.83 31.6 ? C01 OB5 601 A 1 HETATM 2 C C02 OB5 . . . E 3 6.881 13.89 -22.726 0.83 32.85 ? C02 OB5 601 A 1 HETATM 3 C C03 OB5 . . . E 3 6.868 12.599 -22.514 0.83 32.17 ? C03 OB5 601 A 1 HETATM 4 C C04 OB5 . . . E 3 5.741 11.946 -22.373 0.83 30.93 ? C04 OB5 601 A 1 HETATM 5 C C05 OB5 . . . E 3 4.568 12.536 -22.464 0.83 31.21 ? C05 OB5 601 A 1 HETATM 6 C C06 OB5 . . . E 3 4.603 13.833 -22.651 0.83 30.87 ? C06 OB5 601 A 1 HETATM 7 O O01 OB5 . . . E 3 8.027 14.547 -22.868 0.83 33.53 ? O01 OB5 601 A 1 HETATM 8 C C07 OB5 . . . E 3 3.447 11.871 -22.281 0.83 31.95 ? C07 OB5 601 A 1 HETATM 9 C C08 OB5 . . . E 3 2.228 11.832 -22.843 0.83 27.88 ? C08 OB5 601 A 1 HETATM 10 C C09 OB5 . . . E 3 1.524 10.824 -21.927 0.83 30.05 ? C09 OB5 601 A 1 HETATM 11 C C10 OB5 . . . E 3 1.642 12.416 -23.916 0.83 25.05 ? C10 OB5 601 A 1 HETATM 12 C C11 OB5 . . . E 3 3.361 10.919 -21.099 0.83 33.28 ? C11 OB5 601 A 1 HETATM 13 C C12 OB5 . . . E 3 2.318 12.819 -24.978 0.83 23.89 ? C12 OB5 601 A 1 HETATM 14 C C13 OB5 . . . E 3 1.754 13.383 -26.04 0.83 22.24 ? C13 OB5 601 A 1 HETATM 15 C C14 OB5 . . . E 3 0.445 13.582 -26.122 0.83 23.93 ? C14 OB5 601 A 1 HETATM 16 C C15 OB5 . . . E 3 -0.262 13.201 -25.062 0.83 21.66 ? C15 OB5 601 A 1 HETATM 17 C C16 OB5 . . . E 3 0.322 12.642 -24.005 0.83 24.63 ? C16 OB5 601 A 1 HETATM 18 O O02 OB5 . . . E 3 -0.111 14.158 -27.174 0.83 18.4 ? O02 OB5 601 A 1 HETATM 19 C C17 OB5 . . . E 3 2.617 11.673 -20.024 0.83 29.02 ? C17 OB5 601 A 1 HETATM 20 C C18 OB5 . . . E 3 1.214 11.421 -20.562 0.83 28.77 ? C18 OB5 601 A 1 HETATM 21 S S01 OB5 . . . E 3 0.307 10.259 -19.477 0.83 42.26 ? S01 OB5 601 A 1 HETATM 22 O O03 OB5 . . . E 3 2.492 9.946 -21.526 0.83 32.85 ? O03 OB5 601 A 1 HETATM 23 N N01 OB5 . . . E 3 0.844 8.715 -19.657 0.83 46.3 ? N01 OB5 601 A 1 HETATM 24 O O04 OB5 . . . E 3 0.681 10.913 -18.3 0.83 41.73 ? O04 OB5 601 A 1 HETATM 25 O O05 OB5 . . . E 3 -0.869 10.61 -20.138 0.83 41.69 ? O05 OB5 601 A 1 HETATM 26 C C19 OB5 . . . E 3 1.821 8.232 -19.022 0.83 52.85 ? C19 OB5 601 A 1 HETATM 27 C C20 OB5 . . . E 3 0.126 7.873 -20.646 0.83 45.43 ? C20 OB5 601 A 1 HETATM 28 C C21 OB5 . . . E 3 2.62 7.227 -19.421 0.83 57.24 ? C21 OB5 601 A 1 HETATM 29 C C25 OB5 . . . E 3 2.168 8.704 -17.825 0.83 57.36 ? C25 OB5 601 A 1 HETATM 30 C C26 OB5 . . . E 3 -0.666 6.719 -20.072 0.83 45.12 ? C26 OB5 601 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #