data_5KCO
#
_model_server_result.job_id            4runfhrwEd9QD1ep6ZJjaw 
_model_server_result.datetime_utc      '2024-11-13 02:57:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kco 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AB","auth_seq_id":552}' 
#
_entry.id    5KCO 
#
_exptl.entry_id    5KCO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5KCO 
_cell.length_a            55.772 
_cell.length_b            63.761 
_cell.length_c            70.522 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KCO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 ZA N N 
? 5 AB N N 
? 5 BB N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 103 n n 
S C1 DMS sing 104 n n 
S C2 DMS sing 105 n n 
C1 H11 DMS sing 106 n n 
C1 H12 DMS sing 107 n n 
C1 H13 DMS sing 108 n n 
C2 H21 DMS sing 109 n n 
C2 H22 DMS sing 110 n n 
C2 H23 DMS sing 111 n n 
#
_atom_sites.entry_id                     5KCO 
_atom_sites.fract_transf_matrix[1][1]    0.01793 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015684 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01418 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 501 1 SO4 SO4 . 
C 2 SO4 A 1 502 2 SO4 SO4 . 
D 3 6RO A 1 503 1 6RO XXX . 
E 4 UNX A 1 504 1 UNX UNX . 
F 4 UNX A 1 505 3 UNX UNX . 
G 4 UNX A 1 506 4 UNX UNX . 
H 4 UNX A 1 507 5 UNX UNX . 
I 4 UNX A 1 508 6 UNX UNX . 
J 4 UNX A 1 509 7 UNX UNX . 
K 4 UNX A 1 510 8 UNX UNX . 
L 4 UNX A 1 511 9 UNX UNX . 
M 4 UNX A 1 512 11 UNX UNX . 
N 4 UNX A 1 513 12 UNX UNX . 
O 4 UNX A 1 514 13 UNX UNX . 
P 4 UNX A 1 515 14 UNX UNX . 
Q 4 UNX A 1 516 16 UNX UNX . 
R 4 UNX A 1 517 17 UNX UNX . 
S 4 UNX A 1 518 18 UNX UNX . 
T 4 UNX A 1 519 19 UNX UNX . 
U 4 UNX A 1 520 20 UNX UNX . 
V 4 UNX A 1 521 21 UNX UNX . 
W 4 UNX A 1 522 23 UNX UNX . 
X 4 UNX A 1 523 25 UNX UNX . 
Y 4 UNX A 1 524 26 UNX UNX . 
Z 4 UNX A 1 525 27 UNX UNX . 
AA 4 UNX A 1 526 28 UNX UNX . 
BA 4 UNX A 1 527 29 UNX UNX . 
CA 4 UNX A 1 528 30 UNX UNX . 
DA 4 UNX A 1 529 31 UNX UNX . 
EA 4 UNX A 1 530 32 UNX UNX . 
FA 4 UNX A 1 531 33 UNX UNX . 
GA 4 UNX A 1 532 34 UNX UNX . 
HA 4 UNX A 1 533 35 UNX UNX . 
IA 4 UNX A 1 534 36 UNX UNX . 
JA 4 UNX A 1 535 37 UNX UNX . 
KA 4 UNX A 1 536 38 UNX UNX . 
LA 4 UNX A 1 537 39 UNX UNX . 
MA 4 UNX A 1 538 40 UNX UNX . 
NA 4 UNX A 1 539 41 UNX UNX . 
OA 4 UNX A 1 540 42 UNX UNX . 
PA 4 UNX A 1 541 43 UNX UNX . 
QA 4 UNX A 1 542 44 UNX UNX . 
RA 4 UNX A 1 543 45 UNX UNX . 
SA 4 UNX A 1 544 46 UNX UNX . 
TA 4 UNX A 1 545 47 UNX UNX . 
UA 4 UNX A 1 546 48 UNX UNX . 
VA 4 UNX A 1 547 49 UNX UNX . 
WA 4 UNX A 1 548 50 UNX UNX . 
XA 4 UNX A 1 549 51 UNX UNX . 
YA 4 UNX A 1 550 52 UNX UNX . 
ZA 5 DMS A 1 551 1 DMS DMS . 
AB 5 DMS A 1 552 2 DMS DMS . 
BB 5 DMS A 1 553 3 DMS DMS . 
CB 6 HOH A 1 601 167 HOH HOH . 
CB 6 HOH A 2 602 184 HOH HOH . 
CB 6 HOH A 3 603 56 HOH HOH . 
CB 6 HOH A 4 604 168 HOH HOH . 
CB 6 HOH A 5 605 157 HOH HOH . 
CB 6 HOH A 6 606 128 HOH HOH . 
CB 6 HOH A 7 607 73 HOH HOH . 
CB 6 HOH A 8 608 144 HOH HOH . 
CB 6 HOH A 9 609 169 HOH HOH . 
CB 6 HOH A 10 610 83 HOH HOH . 
CB 6 HOH A 11 611 30 HOH HOH . 
CB 6 HOH A 12 612 126 HOH HOH . 
CB 6 HOH A 13 613 101 HOH HOH . 
CB 6 HOH A 14 614 5 HOH HOH . 
CB 6 HOH A 15 615 78 HOH HOH . 
CB 6 HOH A 16 616 98 HOH HOH . 
CB 6 HOH A 17 617 158 HOH HOH . 
CB 6 HOH A 18 618 185 HOH HOH . 
CB 6 HOH A 19 619 118 HOH HOH . 
CB 6 HOH A 20 620 77 HOH HOH . 
CB 6 HOH A 21 621 16 HOH HOH . 
CB 6 HOH A 22 622 40 HOH HOH . 
CB 6 HOH A 23 623 84 HOH HOH . 
CB 6 HOH A 24 624 10 HOH HOH . 
CB 6 HOH A 25 625 18 HOH HOH . 
CB 6 HOH A 26 626 42 HOH HOH . 
CB 6 HOH A 27 627 100 HOH HOH . 
CB 6 HOH A 28 628 48 HOH HOH . 
CB 6 HOH A 29 629 94 HOH HOH . 
CB 6 HOH A 30 630 178 HOH HOH . 
CB 6 HOH A 31 631 183 HOH HOH . 
CB 6 HOH A 32 632 59 HOH HOH . 
CB 6 HOH A 33 633 182 HOH HOH . 
CB 6 HOH A 34 634 24 HOH HOH . 
CB 6 HOH A 35 635 104 HOH HOH . 
CB 6 HOH A 36 636 12 HOH HOH . 
CB 6 HOH A 37 637 70 HOH HOH . 
CB 6 HOH A 38 638 115 HOH HOH . 
CB 6 HOH A 39 639 52 HOH HOH . 
CB 6 HOH A 40 640 57 HOH HOH . 
CB 6 HOH A 41 641 4 HOH HOH . 
CB 6 HOH A 42 642 19 HOH HOH . 
CB 6 HOH A 43 643 116 HOH HOH . 
CB 6 HOH A 44 644 8 HOH HOH . 
CB 6 HOH A 45 645 15 HOH HOH . 
CB 6 HOH A 46 646 43 HOH HOH . 
CB 6 HOH A 47 647 36 HOH HOH . 
CB 6 HOH A 48 648 41 HOH HOH . 
CB 6 HOH A 49 649 127 HOH HOH . 
CB 6 HOH A 50 650 97 HOH HOH . 
CB 6 HOH A 51 651 179 HOH HOH . 
CB 6 HOH A 52 652 74 HOH HOH . 
CB 6 HOH A 53 653 112 HOH HOH . 
CB 6 HOH A 54 654 29 HOH HOH . 
CB 6 HOH A 55 655 20 HOH HOH . 
CB 6 HOH A 56 656 109 HOH HOH . 
CB 6 HOH A 57 657 6 HOH HOH . 
CB 6 HOH A 58 658 49 HOH HOH . 
CB 6 HOH A 59 659 187 HOH HOH . 
CB 6 HOH A 60 660 133 HOH HOH . 
CB 6 HOH A 61 661 103 HOH HOH . 
CB 6 HOH A 62 662 164 HOH HOH . 
CB 6 HOH A 63 663 33 HOH HOH . 
CB 6 HOH A 64 664 186 HOH HOH . 
CB 6 HOH A 65 665 107 HOH HOH . 
CB 6 HOH A 66 666 81 HOH HOH . 
CB 6 HOH A 67 667 95 HOH HOH . 
CB 6 HOH A 68 668 37 HOH HOH . 
CB 6 HOH A 69 669 172 HOH HOH . 
CB 6 HOH A 70 670 27 HOH HOH . 
CB 6 HOH A 71 671 102 HOH HOH . 
CB 6 HOH A 72 672 31 HOH HOH . 
CB 6 HOH A 73 673 189 HOH HOH . 
CB 6 HOH A 74 674 96 HOH HOH . 
CB 6 HOH A 75 675 14 HOH HOH . 
CB 6 HOH A 76 676 170 HOH HOH . 
CB 6 HOH A 77 677 47 HOH HOH . 
CB 6 HOH A 78 678 13 HOH HOH . 
CB 6 HOH A 79 679 130 HOH HOH . 
CB 6 HOH A 80 680 11 HOH HOH . 
CB 6 HOH A 81 681 26 HOH HOH . 
CB 6 HOH A 82 682 17 HOH HOH . 
CB 6 HOH A 83 683 7 HOH HOH . 
CB 6 HOH A 84 684 21 HOH HOH . 
CB 6 HOH A 85 685 152 HOH HOH . 
CB 6 HOH A 86 686 9 HOH HOH . 
CB 6 HOH A 87 687 39 HOH HOH . 
CB 6 HOH A 88 688 46 HOH HOH . 
CB 6 HOH A 89 689 63 HOH HOH . 
CB 6 HOH A 90 690 87 HOH HOH . 
CB 6 HOH A 91 691 143 HOH HOH . 
CB 6 HOH A 92 692 86 HOH HOH . 
CB 6 HOH A 93 693 88 HOH HOH . 
CB 6 HOH A 94 694 91 HOH HOH . 
CB 6 HOH A 95 695 72 HOH HOH . 
CB 6 HOH A 96 696 165 HOH HOH . 
CB 6 HOH A 97 697 171 HOH HOH . 
CB 6 HOH A 98 698 32 HOH HOH . 
CB 6 HOH A 99 699 28 HOH HOH . 
CB 6 HOH A 100 700 108 HOH HOH . 
CB 6 HOH A 101 701 135 HOH HOH . 
CB 6 HOH A 102 702 99 HOH HOH . 
CB 6 HOH A 103 703 121 HOH HOH . 
CB 6 HOH A 104 704 124 HOH HOH . 
CB 6 HOH A 105 705 161 HOH HOH . 
CB 6 HOH A 106 706 92 HOH HOH . 
CB 6 HOH A 107 707 58 HOH HOH . 
CB 6 HOH A 108 708 177 HOH HOH . 
CB 6 HOH A 109 709 132 HOH HOH . 
CB 6 HOH A 110 710 54 HOH HOH . 
CB 6 HOH A 111 711 45 HOH HOH . 
CB 6 HOH A 112 712 188 HOH HOH . 
CB 6 HOH A 113 713 105 HOH HOH . 
CB 6 HOH A 114 714 156 HOH HOH . 
CB 6 HOH A 115 715 75 HOH HOH . 
CB 6 HOH A 116 716 110 HOH HOH . 
CB 6 HOH A 117 717 159 HOH HOH . 
CB 6 HOH A 118 718 82 HOH HOH . 
CB 6 HOH A 119 719 129 HOH HOH . 
CB 6 HOH A 120 720 163 HOH HOH . 
CB 6 HOH A 121 721 67 HOH HOH . 
CB 6 HOH A 122 722 119 HOH HOH . 
CB 6 HOH A 123 723 61 HOH HOH . 
CB 6 HOH A 124 724 148 HOH HOH . 
CB 6 HOH A 125 725 131 HOH HOH . 
CB 6 HOH A 126 726 136 HOH HOH . 
CB 6 HOH A 127 727 149 HOH HOH . 
CB 6 HOH A 128 728 60 HOH HOH . 
CB 6 HOH A 129 729 134 HOH HOH . 
CB 6 HOH A 130 730 85 HOH HOH . 
CB 6 HOH A 131 731 180 HOH HOH . 
CB 6 HOH A 132 732 114 HOH HOH . 
CB 6 HOH A 133 733 175 HOH HOH . 
CB 6 HOH A 134 734 160 HOH HOH . 
CB 6 HOH A 135 735 173 HOH HOH . 
CB 6 HOH A 136 736 181 HOH HOH . 
CB 6 HOH A 137 737 154 HOH HOH . 
CB 6 HOH A 138 738 151 HOH HOH . 
CB 6 HOH A 139 739 147 HOH HOH . 
CB 6 HOH A 140 740 153 HOH HOH . 
CB 6 HOH A 141 741 174 HOH HOH . 
CB 6 HOH A 142 742 68 HOH HOH . 
CB 6 HOH A 143 743 166 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . A . AB 5 14.434 42.315 10.251 0.74 28.15 ? S DMS 552 A 1 
HETATM 2 O O DMS . A . AB 5 14.038 41.281 11.23 0.74 28.5 ? O DMS 552 A 1 
HETATM 3 C C1 DMS . A . AB 5 13.894 43.791 10.929 0.74 25 ? C1 DMS 552 A 1 
HETATM 4 C C2 DMS . A . AB 5 16.098 42.621 10.46 0.74 29.02 ? C2 DMS 552 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#