data_5KCX # _model_server_result.job_id g95gTWndZjh_NNjNGCRgug _model_server_result.datetime_utc '2024-11-26 12:53:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kcx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5KCX # _exptl.entry_id 5KCX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 383.875 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-chloranyl-1-methyl-2-[4-(4-methylpiperazin-1-yl)phenyl]pyrrolo[2,3-b]pyridine-6-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5KCX _cell.length_a 98.01 _cell.length_b 98.01 _cell.length_c 80.67 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KCX _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H22 Cl N5 O' _chem_comp.formula_weight 383.875 _chem_comp.id 6S3 _chem_comp.mon_nstd_flag . _chem_comp.name 4-chloranyl-1-methyl-2-[4-(4-methylpiperazin-1-yl)phenyl]pyrrolo[2,3-b]pyridine-6-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAY NAV 6S3 sing 1 n n CAU NAV 6S3 sing 2 n n CAU CAT 6S3 sing 3 n n NAV CAW 6S3 sing 4 n n CAW CAX 6S3 sing 5 n n CAT NAS 6S3 sing 6 n n NAS CAX 6S3 sing 7 n n NAS CAP 6S3 sing 8 n n CAQ CAP 6S3 doub 9 n y CAQ CAR 6S3 sing 10 n y CAP CAO 6S3 sing 11 n y CAR CAM 6S3 doub 12 n y CAL NAG 6S3 sing 13 n n CAO CAN 6S3 doub 14 n y CAM CAN 6S3 sing 15 n y CAM CAH 6S3 sing 16 n n NAG CAH 6S3 sing 17 n y NAG CAF 6S3 sing 18 n y CAH CAI 6S3 doub 19 n y CAF NAC 6S3 doub 20 n y CAF CAE 6S3 sing 21 n y NAC CAB 6S3 sing 22 n y CAI CAE 6S3 sing 23 n y NAZ CAJ 6S3 sing 24 n n CAE CAD 6S3 doub 25 n y CAB CAJ 6S3 sing 26 n n CAB CAA 6S3 doub 27 n y CAJ OBA 6S3 doub 28 n n CAD CAA 6S3 sing 29 n y CAD CLAK 6S3 sing 30 n n CAT H1 6S3 sing 31 n n CAT H2 6S3 sing 32 n n CAU H3 6S3 sing 33 n n CAU H4 6S3 sing 34 n n CAY H6 6S3 sing 35 n n CAY H7 6S3 sing 36 n n CAY H8 6S3 sing 37 n n CAW H9 6S3 sing 38 n n CAW H10 6S3 sing 39 n n CAX H11 6S3 sing 40 n n CAX H12 6S3 sing 41 n n CAO H13 6S3 sing 42 n n CAN H14 6S3 sing 43 n n CAQ H15 6S3 sing 44 n n CAR H16 6S3 sing 45 n n CAI H17 6S3 sing 46 n n CAA H18 6S3 sing 47 n n NAZ H19 6S3 sing 48 n n NAZ H20 6S3 sing 49 n n CAL H21 6S3 sing 50 n n CAL H22 6S3 sing 51 n n CAL H23 6S3 sing 52 n n # _atom_sites.entry_id 5KCX _atom_sites.fract_transf_matrix[1][1] 0.010203 _atom_sites.fract_transf_matrix[1][2] 0.005891 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011781 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012396 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 401 500 IMD IMD . C 3 ACT A 1 402 501 ACT ACT . D 4 6S3 A 1 403 1 6S3 INH . E 5 HOH A 1 501 150 HOH HOH . E 5 HOH A 2 502 29 HOH HOH . E 5 HOH A 3 503 148 HOH HOH . E 5 HOH A 4 504 145 HOH HOH . E 5 HOH A 5 505 30 HOH HOH . E 5 HOH A 6 506 96 HOH HOH . E 5 HOH A 7 507 64 HOH HOH . E 5 HOH A 8 508 112 HOH HOH . E 5 HOH A 9 509 60 HOH HOH . E 5 HOH A 10 510 24 HOH HOH . E 5 HOH A 11 511 118 HOH HOH . E 5 HOH A 12 512 114 HOH HOH . E 5 HOH A 13 513 137 HOH HOH . E 5 HOH A 14 514 26 HOH HOH . E 5 HOH A 15 515 125 HOH HOH . E 5 HOH A 16 516 75 HOH HOH . E 5 HOH A 17 517 149 HOH HOH . E 5 HOH A 18 518 61 HOH HOH . E 5 HOH A 19 519 34 HOH HOH . E 5 HOH A 20 520 84 HOH HOH . E 5 HOH A 21 521 37 HOH HOH . E 5 HOH A 22 522 77 HOH HOH . E 5 HOH A 23 523 85 HOH HOH . E 5 HOH A 24 524 2 HOH HOH . E 5 HOH A 25 525 127 HOH HOH . E 5 HOH A 26 526 135 HOH HOH . E 5 HOH A 27 527 41 HOH HOH . E 5 HOH A 28 528 90 HOH HOH . E 5 HOH A 29 529 52 HOH HOH . E 5 HOH A 30 530 4 HOH HOH . E 5 HOH A 31 531 98 HOH HOH . E 5 HOH A 32 532 48 HOH HOH . E 5 HOH A 33 533 68 HOH HOH . E 5 HOH A 34 534 147 HOH HOH . E 5 HOH A 35 535 6 HOH HOH . E 5 HOH A 36 536 21 HOH HOH . E 5 HOH A 37 537 82 HOH HOH . E 5 HOH A 38 538 129 HOH HOH . E 5 HOH A 39 539 122 HOH HOH . E 5 HOH A 40 540 59 HOH HOH . E 5 HOH A 41 541 20 HOH HOH . E 5 HOH A 42 542 22 HOH HOH . E 5 HOH A 43 543 136 HOH HOH . E 5 HOH A 44 544 15 HOH HOH . E 5 HOH A 45 545 63 HOH HOH . E 5 HOH A 46 546 1 HOH HOH . E 5 HOH A 47 547 31 HOH HOH . E 5 HOH A 48 548 106 HOH HOH . E 5 HOH A 49 549 46 HOH HOH . E 5 HOH A 50 550 111 HOH HOH . E 5 HOH A 51 551 47 HOH HOH . E 5 HOH A 52 552 89 HOH HOH . E 5 HOH A 53 553 10 HOH HOH . E 5 HOH A 54 554 87 HOH HOH . E 5 HOH A 55 555 83 HOH HOH . E 5 HOH A 56 556 146 HOH HOH . E 5 HOH A 57 557 88 HOH HOH . E 5 HOH A 58 558 70 HOH HOH . E 5 HOH A 59 559 92 HOH HOH . E 5 HOH A 60 560 67 HOH HOH . E 5 HOH A 61 561 36 HOH HOH . E 5 HOH A 62 562 76 HOH HOH . E 5 HOH A 63 563 99 HOH HOH . E 5 HOH A 64 564 39 HOH HOH . E 5 HOH A 65 565 120 HOH HOH . E 5 HOH A 66 566 103 HOH HOH . E 5 HOH A 67 567 27 HOH HOH . E 5 HOH A 68 568 65 HOH HOH . E 5 HOH A 69 569 19 HOH HOH . E 5 HOH A 70 570 3 HOH HOH . E 5 HOH A 71 571 33 HOH HOH . E 5 HOH A 72 572 73 HOH HOH . E 5 HOH A 73 573 86 HOH HOH . E 5 HOH A 74 574 9 HOH HOH . E 5 HOH A 75 575 28 HOH HOH . E 5 HOH A 76 576 74 HOH HOH . E 5 HOH A 77 577 81 HOH HOH . E 5 HOH A 78 578 121 HOH HOH . E 5 HOH A 79 579 54 HOH HOH . E 5 HOH A 80 580 95 HOH HOH . E 5 HOH A 81 581 69 HOH HOH . E 5 HOH A 82 582 56 HOH HOH . E 5 HOH A 83 583 23 HOH HOH . E 5 HOH A 84 584 57 HOH HOH . E 5 HOH A 85 585 79 HOH HOH . E 5 HOH A 86 586 5 HOH HOH . E 5 HOH A 87 587 17 HOH HOH . E 5 HOH A 88 588 53 HOH HOH . E 5 HOH A 89 589 80 HOH HOH . E 5 HOH A 90 590 123 HOH HOH . E 5 HOH A 91 591 35 HOH HOH . E 5 HOH A 92 592 55 HOH HOH . E 5 HOH A 93 593 104 HOH HOH . E 5 HOH A 94 594 109 HOH HOH . E 5 HOH A 95 595 128 HOH HOH . E 5 HOH A 96 596 119 HOH HOH . E 5 HOH A 97 597 8 HOH HOH . E 5 HOH A 98 598 18 HOH HOH . E 5 HOH A 99 599 25 HOH HOH . E 5 HOH A 100 600 51 HOH HOH . E 5 HOH A 101 601 58 HOH HOH . E 5 HOH A 102 602 14 HOH HOH . E 5 HOH A 103 603 72 HOH HOH . E 5 HOH A 104 604 100 HOH HOH . E 5 HOH A 105 605 32 HOH HOH . E 5 HOH A 106 606 124 HOH HOH . E 5 HOH A 107 607 16 HOH HOH . E 5 HOH A 108 608 50 HOH HOH . E 5 HOH A 109 609 66 HOH HOH . E 5 HOH A 110 610 78 HOH HOH . E 5 HOH A 111 611 42 HOH HOH . E 5 HOH A 112 612 62 HOH HOH . E 5 HOH A 113 613 140 HOH HOH . E 5 HOH A 114 614 49 HOH HOH . E 5 HOH A 115 615 40 HOH HOH . E 5 HOH A 116 616 108 HOH HOH . E 5 HOH A 117 617 13 HOH HOH . E 5 HOH A 118 618 71 HOH HOH . E 5 HOH A 119 619 7 HOH HOH . E 5 HOH A 120 620 141 HOH HOH . E 5 HOH A 121 621 115 HOH HOH . E 5 HOH A 122 622 101 HOH HOH . E 5 HOH A 123 623 139 HOH HOH . E 5 HOH A 124 624 12 HOH HOH . E 5 HOH A 125 625 38 HOH HOH . E 5 HOH A 126 626 116 HOH HOH . E 5 HOH A 127 627 138 HOH HOH . E 5 HOH A 128 628 97 HOH HOH . E 5 HOH A 129 629 143 HOH HOH . E 5 HOH A 130 630 117 HOH HOH . E 5 HOH A 131 631 93 HOH HOH . E 5 HOH A 132 632 105 HOH HOH . E 5 HOH A 133 633 131 HOH HOH . E 5 HOH A 134 634 134 HOH HOH . E 5 HOH A 135 635 113 HOH HOH . E 5 HOH A 136 636 142 HOH HOH . E 5 HOH A 137 637 45 HOH HOH . E 5 HOH A 138 638 144 HOH HOH . E 5 HOH A 139 639 107 HOH HOH . E 5 HOH A 140 640 91 HOH HOH . E 5 HOH A 141 641 126 HOH HOH . E 5 HOH A 142 642 102 HOH HOH . E 5 HOH A 143 643 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAT 6S3 . . . D 4 25.254 42.081 -6.561 1 56.09 ? CAT 6S3 403 A 1 HETATM 2 C CAU 6S3 . . . D 4 24.607 42.471 -7.88 1 57.18 ? CAU 6S3 403 A 1 HETATM 3 N NAV 6S3 . . . D 4 24.004 43.808 -7.796 1 59.46 ? NAV 6S3 403 A 1 HETATM 4 C CAY 6S3 . . . D 4 23.401 44.157 -9.091 1 59.13 ? CAY 6S3 403 A 1 HETATM 5 C CAW 6S3 . . . D 4 22.967 43.814 -6.755 1 57.27 ? CAW 6S3 403 A 1 HETATM 6 C CAX 6S3 . . . D 4 23.557 43.471 -5.397 1 55.99 ? CAX 6S3 403 A 1 HETATM 7 N NAS 6S3 . . . D 4 24.287 42.184 -5.445 1 54.29 ? NAS 6S3 403 A 1 HETATM 8 C CAP 6S3 . . . D 4 24.09 41.2 -4.557 1 52.46 ? CAP 6S3 403 A 1 HETATM 9 C CAO 6S3 . . . D 4 23.685 41.502 -3.262 1 51.62 ? CAO 6S3 403 A 1 HETATM 10 C CAN 6S3 . . . D 4 23.481 40.481 -2.341 1 48.76 ? CAN 6S3 403 A 1 HETATM 11 C CAQ 6S3 . . . D 4 24.29 39.876 -4.931 1 49.04 ? CAQ 6S3 403 A 1 HETATM 12 C CAR 6S3 . . . D 4 24.085 38.855 -4.011 1 47.82 ? CAR 6S3 403 A 1 HETATM 13 C CAM 6S3 . . . D 4 23.681 39.158 -2.716 1 45.94 ? CAM 6S3 403 A 1 HETATM 14 C CAH 6S3 . . . D 4 23.463 38.071 -1.735 1 43.86 ? CAH 6S3 403 A 1 HETATM 15 C CAI 6S3 . . . D 4 23.746 38.145 -0.441 1 42.15 ? CAI 6S3 403 A 1 HETATM 16 C CAE 6S3 . . . D 4 23.408 36.973 0.093 1 39.65 ? CAE 6S3 403 A 1 HETATM 17 C CAD 6S3 . . . D 4 23.485 36.523 1.343 1 37.69 ? CAD 6S3 403 A 1 HETATM 18 CL CLAK 6S3 . . . D 4 24.113 37.538 2.588 1 33.57 ? CLAK 6S3 403 A 1 HETATM 19 C CAA 6S3 . . . D 4 23.058 35.237 1.644 1 33.46 ? CAA 6S3 403 A 1 HETATM 20 C CAB 6S3 . . . D 4 22.558 34.449 0.618 1 36.34 ? CAB 6S3 403 A 1 HETATM 21 C CAJ 6S3 . . . D 4 22.086 33.053 0.897 1 35.86 ? CAJ 6S3 403 A 1 HETATM 22 O OBA 6S3 . . . D 4 21.946 32.651 2.051 1 41.44 ? OBA 6S3 403 A 1 HETATM 23 N NAZ 6S3 . . . D 4 21.841 32.316 -0.182 1 36.38 ? NAZ 6S3 403 A 1 HETATM 24 N NAC 6S3 . . . D 4 22.501 34.945 -0.625 1 38.2 ? NAC 6S3 403 A 1 HETATM 25 C CAF 6S3 . . . D 4 22.922 36.194 -0.88 1 38.82 ? CAF 6S3 403 A 1 HETATM 26 N NAG 6S3 . . . D 4 22.957 36.879 -2.02 1 41.17 ? NAG 6S3 403 A 1 HETATM 27 C CAL 6S3 . . . D 4 22.515 36.403 -3.35 1 40.52 ? CAL 6S3 403 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 27 #