data_5KE2 # _model_server_result.job_id iPmewFQceQr8xXhMY1ko_g _model_server_result.datetime_utc '2025-01-10 08:04:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ke2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 5KE2 # _exptl.entry_id 5KE2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KE2 _cell.length_a 54.816 _cell.length_b 63.891 _cell.length_c 69.793 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KE2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 121 n n C1 C2 EDO sing 122 n n C1 H11 EDO sing 123 n n C1 H12 EDO sing 124 n n O1 HO1 EDO sing 125 n n C2 O2 EDO sing 126 n n C2 H21 EDO sing 127 n n C2 H22 EDO sing 128 n n O2 HO2 EDO sing 129 n n # _atom_sites.entry_id 5KE2 _atom_sites.fract_transf_matrix[1][1] 0.018243 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015652 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014328 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6S4 A 1 501 1 6S4 XXX . C 3 EDO A 1 502 1 EDO EDO . D 3 EDO A 1 503 2 EDO EDO . E 4 SO4 A 1 504 1 SO4 SO4 . F 4 SO4 A 1 505 2 SO4 SO4 . G 4 SO4 A 1 506 4 SO4 SO4 . H 4 SO4 A 1 507 5 SO4 SO4 . I 4 SO4 A 1 508 6 SO4 SO4 . J 4 SO4 A 1 509 7 SO4 SO4 . K 5 UNX A 1 510 1001 UNX UNX . L 5 UNX A 1 511 1002 UNX UNX . M 5 UNX A 1 512 1003 UNX UNX . N 5 UNX A 1 513 1004 UNX UNX . O 5 UNX A 1 514 1005 UNX UNX . P 5 UNX A 1 515 1006 UNX UNX . Q 5 UNX A 1 516 1007 UNX UNX . R 5 UNX A 1 517 1008 UNX UNX . S 6 HOH A 1 601 43 HOH HOH . S 6 HOH A 2 602 201 HOH HOH . S 6 HOH A 3 603 81 HOH HOH . S 6 HOH A 4 604 68 HOH HOH . S 6 HOH A 5 605 190 HOH HOH . S 6 HOH A 6 606 101 HOH HOH . S 6 HOH A 7 607 186 HOH HOH . S 6 HOH A 8 608 134 HOH HOH . S 6 HOH A 9 609 122 HOH HOH . S 6 HOH A 10 610 165 HOH HOH . S 6 HOH A 11 611 27 HOH HOH . S 6 HOH A 12 612 97 HOH HOH . S 6 HOH A 13 613 60 HOH HOH . S 6 HOH A 14 614 82 HOH HOH . S 6 HOH A 15 615 123 HOH HOH . S 6 HOH A 16 616 38 HOH HOH . S 6 HOH A 17 617 64 HOH HOH . S 6 HOH A 18 618 61 HOH HOH . S 6 HOH A 19 619 25 HOH HOH . S 6 HOH A 20 620 5 HOH HOH . S 6 HOH A 21 621 16 HOH HOH . S 6 HOH A 22 622 14 HOH HOH . S 6 HOH A 23 623 75 HOH HOH . S 6 HOH A 24 624 159 HOH HOH . S 6 HOH A 25 625 172 HOH HOH . S 6 HOH A 26 626 110 HOH HOH . S 6 HOH A 27 627 162 HOH HOH . S 6 HOH A 28 628 146 HOH HOH . S 6 HOH A 29 629 67 HOH HOH . S 6 HOH A 30 630 9 HOH HOH . S 6 HOH A 31 631 174 HOH HOH . S 6 HOH A 32 632 121 HOH HOH . S 6 HOH A 33 633 26 HOH HOH . S 6 HOH A 34 634 20 HOH HOH . S 6 HOH A 35 635 87 HOH HOH . S 6 HOH A 36 636 141 HOH HOH . S 6 HOH A 37 637 12 HOH HOH . S 6 HOH A 38 638 179 HOH HOH . S 6 HOH A 39 639 125 HOH HOH . S 6 HOH A 40 640 21 HOH HOH . S 6 HOH A 41 641 185 HOH HOH . S 6 HOH A 42 642 85 HOH HOH . S 6 HOH A 43 643 106 HOH HOH . S 6 HOH A 44 644 152 HOH HOH . S 6 HOH A 45 645 69 HOH HOH . S 6 HOH A 46 646 196 HOH HOH . S 6 HOH A 47 647 39 HOH HOH . S 6 HOH A 48 648 57 HOH HOH . S 6 HOH A 49 649 155 HOH HOH . S 6 HOH A 50 650 198 HOH HOH . S 6 HOH A 51 651 170 HOH HOH . S 6 HOH A 52 652 130 HOH HOH . S 6 HOH A 53 653 200 HOH HOH . S 6 HOH A 54 654 195 HOH HOH . S 6 HOH A 55 655 1 HOH HOH . S 6 HOH A 56 656 169 HOH HOH . S 6 HOH A 57 657 150 HOH HOH . S 6 HOH A 58 658 76 HOH HOH . S 6 HOH A 59 659 126 HOH HOH . S 6 HOH A 60 660 24 HOH HOH . S 6 HOH A 61 661 6 HOH HOH . S 6 HOH A 62 662 13 HOH HOH . S 6 HOH A 63 663 29 HOH HOH . S 6 HOH A 64 664 30 HOH HOH . S 6 HOH A 65 665 8 HOH HOH . S 6 HOH A 66 666 31 HOH HOH . S 6 HOH A 67 667 80 HOH HOH . S 6 HOH A 68 668 131 HOH HOH . S 6 HOH A 69 669 53 HOH HOH . S 6 HOH A 70 670 45 HOH HOH . S 6 HOH A 71 671 10 HOH HOH . S 6 HOH A 72 672 15 HOH HOH . S 6 HOH A 73 673 184 HOH HOH . S 6 HOH A 74 674 207 HOH HOH . S 6 HOH A 75 675 4 HOH HOH . S 6 HOH A 76 676 147 HOH HOH . S 6 HOH A 77 677 50 HOH HOH . S 6 HOH A 78 678 36 HOH HOH . S 6 HOH A 79 679 188 HOH HOH . S 6 HOH A 80 680 164 HOH HOH . S 6 HOH A 81 681 78 HOH HOH . S 6 HOH A 82 682 191 HOH HOH . S 6 HOH A 83 683 160 HOH HOH . S 6 HOH A 84 684 59 HOH HOH . S 6 HOH A 85 685 102 HOH HOH . S 6 HOH A 86 686 56 HOH HOH . S 6 HOH A 87 687 58 HOH HOH . S 6 HOH A 88 688 115 HOH HOH . S 6 HOH A 89 689 48 HOH HOH . S 6 HOH A 90 690 189 HOH HOH . S 6 HOH A 91 691 23 HOH HOH . S 6 HOH A 92 692 2 HOH HOH . S 6 HOH A 93 693 109 HOH HOH . S 6 HOH A 94 694 73 HOH HOH . S 6 HOH A 95 695 88 HOH HOH . S 6 HOH A 96 696 90 HOH HOH . S 6 HOH A 97 697 62 HOH HOH . S 6 HOH A 98 698 55 HOH HOH . S 6 HOH A 99 699 49 HOH HOH . S 6 HOH A 100 700 149 HOH HOH . S 6 HOH A 101 701 83 HOH HOH . S 6 HOH A 102 702 197 HOH HOH . S 6 HOH A 103 703 52 HOH HOH . S 6 HOH A 104 704 206 HOH HOH . S 6 HOH A 105 705 65 HOH HOH . S 6 HOH A 106 706 139 HOH HOH . S 6 HOH A 107 707 22 HOH HOH . S 6 HOH A 108 708 120 HOH HOH . S 6 HOH A 109 709 107 HOH HOH . S 6 HOH A 110 710 44 HOH HOH . S 6 HOH A 111 711 114 HOH HOH . S 6 HOH A 112 712 111 HOH HOH . S 6 HOH A 113 713 35 HOH HOH . S 6 HOH A 114 714 17 HOH HOH . S 6 HOH A 115 715 98 HOH HOH . S 6 HOH A 116 716 151 HOH HOH . S 6 HOH A 117 717 163 HOH HOH . S 6 HOH A 118 718 137 HOH HOH . S 6 HOH A 119 719 104 HOH HOH . S 6 HOH A 120 720 63 HOH HOH . S 6 HOH A 121 721 153 HOH HOH . S 6 HOH A 122 722 128 HOH HOH . S 6 HOH A 123 723 3 HOH HOH . S 6 HOH A 124 724 145 HOH HOH . S 6 HOH A 125 725 42 HOH HOH . S 6 HOH A 126 726 71 HOH HOH . S 6 HOH A 127 727 92 HOH HOH . S 6 HOH A 128 728 37 HOH HOH . S 6 HOH A 129 729 41 HOH HOH . S 6 HOH A 130 730 140 HOH HOH . S 6 HOH A 131 731 72 HOH HOH . S 6 HOH A 132 732 11 HOH HOH . S 6 HOH A 133 733 99 HOH HOH . S 6 HOH A 134 734 108 HOH HOH . S 6 HOH A 135 735 112 HOH HOH . S 6 HOH A 136 736 66 HOH HOH . S 6 HOH A 137 737 34 HOH HOH . S 6 HOH A 138 738 51 HOH HOH . S 6 HOH A 139 739 135 HOH HOH . S 6 HOH A 140 740 18 HOH HOH . S 6 HOH A 141 741 156 HOH HOH . S 6 HOH A 142 742 208 HOH HOH . S 6 HOH A 143 743 74 HOH HOH . S 6 HOH A 144 744 171 HOH HOH . S 6 HOH A 145 745 47 HOH HOH . S 6 HOH A 146 746 194 HOH HOH . S 6 HOH A 147 747 100 HOH HOH . S 6 HOH A 148 748 89 HOH HOH . S 6 HOH A 149 749 28 HOH HOH . S 6 HOH A 150 750 84 HOH HOH . S 6 HOH A 151 751 204 HOH HOH . S 6 HOH A 152 752 19 HOH HOH . S 6 HOH A 153 753 177 HOH HOH . S 6 HOH A 154 754 7 HOH HOH . S 6 HOH A 155 755 86 HOH HOH . S 6 HOH A 156 756 166 HOH HOH . S 6 HOH A 157 757 103 HOH HOH . S 6 HOH A 158 758 33 HOH HOH . S 6 HOH A 159 759 168 HOH HOH . S 6 HOH A 160 760 117 HOH HOH . S 6 HOH A 161 761 32 HOH HOH . S 6 HOH A 162 762 154 HOH HOH . S 6 HOH A 163 763 40 HOH HOH . S 6 HOH A 164 764 143 HOH HOH . S 6 HOH A 165 765 161 HOH HOH . S 6 HOH A 166 766 148 HOH HOH . S 6 HOH A 167 767 157 HOH HOH . S 6 HOH A 168 768 79 HOH HOH . S 6 HOH A 169 769 136 HOH HOH . S 6 HOH A 170 770 91 HOH HOH . S 6 HOH A 171 771 54 HOH HOH . S 6 HOH A 172 772 182 HOH HOH . S 6 HOH A 173 773 205 HOH HOH . S 6 HOH A 174 774 119 HOH HOH . S 6 HOH A 175 775 175 HOH HOH . S 6 HOH A 176 776 113 HOH HOH . S 6 HOH A 177 777 199 HOH HOH . S 6 HOH A 178 778 193 HOH HOH . S 6 HOH A 179 779 180 HOH HOH . S 6 HOH A 180 780 118 HOH HOH . S 6 HOH A 181 781 167 HOH HOH . S 6 HOH A 182 782 187 HOH HOH . S 6 HOH A 183 783 95 HOH HOH . S 6 HOH A 184 784 138 HOH HOH . S 6 HOH A 185 785 46 HOH HOH . S 6 HOH A 186 786 127 HOH HOH . S 6 HOH A 187 787 124 HOH HOH . S 6 HOH A 188 788 202 HOH HOH . S 6 HOH A 189 789 142 HOH HOH . S 6 HOH A 190 790 181 HOH HOH . S 6 HOH A 191 791 70 HOH HOH . S 6 HOH A 192 792 158 HOH HOH . S 6 HOH A 193 793 178 HOH HOH . S 6 HOH A 194 794 93 HOH HOH . S 6 HOH A 195 795 94 HOH HOH . S 6 HOH A 196 796 176 HOH HOH . S 6 HOH A 197 797 183 HOH HOH . S 6 HOH A 198 798 173 HOH HOH . S 6 HOH A 199 799 144 HOH HOH . S 6 HOH A 200 800 133 HOH HOH . S 6 HOH A 201 801 77 HOH HOH . S 6 HOH A 202 802 132 HOH HOH . S 6 HOH A 203 803 203 HOH HOH . S 6 HOH A 204 804 116 HOH HOH . S 6 HOH A 205 805 96 HOH HOH . S 6 HOH A 206 806 129 HOH HOH . S 6 HOH A 207 807 192 HOH HOH . S 6 HOH A 208 808 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 18.535 67.324 -7.947 1 40.51 ? C1 EDO 503 A 1 HETATM 2 O O1 EDO . . . D 3 17.205 66.95 -7.58 1 39.5 ? O1 EDO 503 A 1 HETATM 3 C C2 EDO . . . D 3 18.686 67.258 -9.454 1 37.51 ? C2 EDO 503 A 1 HETATM 4 O O2 EDO . . . D 3 19.953 66.681 -9.756 1 36.17 ? O2 EDO 503 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #