data_5KE3 # _model_server_result.job_id ae_P5_CKya847KXYjCy5qw _model_server_result.datetime_utc '2025-01-02 16:14:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ke3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5KE3 # _exptl.entry_id 5KE3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 367.441 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (S)-N-(furan-2-ylmethyl)-1-(1,2,3,4-tetrahydroisoquinoline-3-carbonyl)piperidine-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KE3 _cell.length_a 54.3 _cell.length_b 63.342 _cell.length_c 69.187 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KE3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 196 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 385 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id S2 _struct_conn.ptnr2_label_comp_id BME _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BME _struct_conn.ptnr2_auth_seq_id 502 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.06 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H25 N3 O3' _chem_comp.formula_weight 367.441 _chem_comp.id 6S5 _chem_comp.mon_nstd_flag . _chem_comp.name (S)-N-(furan-2-ylmethyl)-1-(1,2,3,4-tetrahydroisoquinoline-3-carbonyl)piperidine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C18 6S5 doub 1 n y C17 C15 6S5 sing 2 n y C18 C19 6S5 sing 3 n y C16 C15 6S5 sing 4 n n C16 N2 6S5 sing 5 n n C15 C14 6S5 doub 6 n y C19 C20 6S5 doub 7 n y C7 C8 6S5 sing 8 n n C7 C6 6S5 sing 9 n n C14 C20 6S5 sing 10 n y C14 C13 6S5 sing 11 n n C12 N2 6S5 sing 12 n n C12 C13 6S5 sing 13 n n C12 C11 6S5 sing 14 n n C8 N1 6S5 sing 15 n n C6 C10 6S5 sing 16 n n C11 N1 6S5 sing 17 n n C11 O2 6S5 doub 18 n n N1 C9 6S5 sing 19 n n C10 C9 6S5 sing 20 n n C6 H1 6S5 sing 21 n n C7 H3 6S5 sing 22 n n C7 H4 6S5 sing 23 n n C8 H5 6S5 sing 24 n n C8 H6 6S5 sing 25 n n N2 H7 6S5 sing 26 n n C9 H9 6S5 sing 27 n n C9 H10 6S5 sing 28 n n C10 H11 6S5 sing 29 n n C10 H12 6S5 sing 30 n n C12 H13 6S5 sing 31 n n C13 H14 6S5 sing 32 n n C13 H15 6S5 sing 33 n n C16 H16 6S5 sing 34 n n C16 H17 6S5 sing 35 n n C17 H18 6S5 sing 36 n n C18 H19 6S5 sing 37 n n C19 H20 6S5 sing 38 n n C20 H21 6S5 sing 39 n n C6 C22 6S5 sing 40 n n C22 N3 6S5 sing 41 n n N3 C5 6S5 sing 42 n n C5 C4 6S5 sing 43 n n C22 O1 6S5 doub 44 n n C4 C3 6S5 doub 45 n y C3 C2 6S5 sing 46 n y C2 C1 6S5 doub 47 n y C4 O3 6S5 sing 48 n y C1 O3 6S5 sing 49 n y N3 H2 6S5 sing 50 n n C5 H8 6S5 sing 51 n n C5 H22 6S5 sing 52 n n C3 H23 6S5 sing 53 n n C2 H24 6S5 sing 54 n n C1 H25 6S5 sing 55 n n # _atom_sites.entry_id 5KE3 _atom_sites.fract_transf_matrix[1][1] 0.018416 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015787 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6S5 A 1 501 1 6S5 XXX . C 3 BME A 1 502 1 BME BME . D 4 SO4 A 1 503 1 SO4 SO4 . E 4 SO4 A 1 504 2 SO4 SO4 . F 4 SO4 A 1 505 3 SO4 SO4 . G 4 SO4 A 1 506 4 SO4 SO4 . H 5 UNX A 1 507 1001 UNX UNX . I 5 UNX A 1 508 1002 UNX UNX . J 5 UNX A 1 509 1003 UNX UNX . K 5 UNX A 1 510 1004 UNX UNX . L 5 UNX A 1 511 1005 UNX UNX . M 5 UNX A 1 512 1006 UNX UNX . N 5 UNX A 1 513 1007 UNX UNX . O 5 UNX A 1 514 1009 UNX UNX . P 5 UNX A 1 515 1010 UNX UNX . Q 5 UNX A 1 516 1011 UNX UNX . R 6 HOH A 1 601 223 HOH HOH . R 6 HOH A 2 602 240 HOH HOH . R 6 HOH A 3 603 43 HOH HOH . R 6 HOH A 4 604 138 HOH HOH . R 6 HOH A 5 605 241 HOH HOH . R 6 HOH A 6 606 70 HOH HOH . R 6 HOH A 7 607 102 HOH HOH . R 6 HOH A 8 608 84 HOH HOH . R 6 HOH A 9 609 76 HOH HOH . R 6 HOH A 10 610 157 HOH HOH . R 6 HOH A 11 611 83 HOH HOH . R 6 HOH A 12 612 216 HOH HOH . R 6 HOH A 13 613 60 HOH HOH . R 6 HOH A 14 614 45 HOH HOH . R 6 HOH A 15 615 65 HOH HOH . R 6 HOH A 16 616 128 HOH HOH . R 6 HOH A 17 617 210 HOH HOH . R 6 HOH A 18 618 169 HOH HOH . R 6 HOH A 19 619 107 HOH HOH . R 6 HOH A 20 620 81 HOH HOH . R 6 HOH A 21 621 129 HOH HOH . R 6 HOH A 22 622 188 HOH HOH . R 6 HOH A 23 623 9 HOH HOH . R 6 HOH A 24 624 147 HOH HOH . R 6 HOH A 25 625 35 HOH HOH . R 6 HOH A 26 626 78 HOH HOH . R 6 HOH A 27 627 221 HOH HOH . R 6 HOH A 28 628 75 HOH HOH . R 6 HOH A 29 629 228 HOH HOH . R 6 HOH A 30 630 68 HOH HOH . R 6 HOH A 31 631 17 HOH HOH . R 6 HOH A 32 632 25 HOH HOH . R 6 HOH A 33 633 242 HOH HOH . R 6 HOH A 34 634 6 HOH HOH . R 6 HOH A 35 635 110 HOH HOH . R 6 HOH A 36 636 20 HOH HOH . R 6 HOH A 37 637 175 HOH HOH . R 6 HOH A 38 638 4 HOH HOH . R 6 HOH A 39 639 15 HOH HOH . R 6 HOH A 40 640 202 HOH HOH . R 6 HOH A 41 641 136 HOH HOH . R 6 HOH A 42 642 144 HOH HOH . R 6 HOH A 43 643 29 HOH HOH . R 6 HOH A 44 644 204 HOH HOH . R 6 HOH A 45 645 86 HOH HOH . R 6 HOH A 46 646 101 HOH HOH . R 6 HOH A 47 647 87 HOH HOH . R 6 HOH A 48 648 47 HOH HOH . R 6 HOH A 49 649 51 HOH HOH . R 6 HOH A 50 650 125 HOH HOH . R 6 HOH A 51 651 14 HOH HOH . R 6 HOH A 52 652 18 HOH HOH . R 6 HOH A 53 653 237 HOH HOH . R 6 HOH A 54 654 205 HOH HOH . R 6 HOH A 55 655 203 HOH HOH . R 6 HOH A 56 656 211 HOH HOH . R 6 HOH A 57 657 212 HOH HOH . R 6 HOH A 58 658 16 HOH HOH . R 6 HOH A 59 659 46 HOH HOH . R 6 HOH A 60 660 7 HOH HOH . R 6 HOH A 61 661 71 HOH HOH . R 6 HOH A 62 662 2 HOH HOH . R 6 HOH A 63 663 91 HOH HOH . R 6 HOH A 64 664 42 HOH HOH . R 6 HOH A 65 665 48 HOH HOH . R 6 HOH A 66 666 192 HOH HOH . R 6 HOH A 67 667 21 HOH HOH . R 6 HOH A 68 668 96 HOH HOH . R 6 HOH A 69 669 54 HOH HOH . R 6 HOH A 70 670 164 HOH HOH . R 6 HOH A 71 671 152 HOH HOH . R 6 HOH A 72 672 52 HOH HOH . R 6 HOH A 73 673 26 HOH HOH . R 6 HOH A 74 674 10 HOH HOH . R 6 HOH A 75 675 33 HOH HOH . R 6 HOH A 76 676 230 HOH HOH . R 6 HOH A 77 677 3 HOH HOH . R 6 HOH A 78 678 194 HOH HOH . R 6 HOH A 79 679 1 HOH HOH . R 6 HOH A 80 680 120 HOH HOH . R 6 HOH A 81 681 37 HOH HOH . R 6 HOH A 82 682 38 HOH HOH . R 6 HOH A 83 683 11 HOH HOH . R 6 HOH A 84 684 8 HOH HOH . R 6 HOH A 85 685 56 HOH HOH . R 6 HOH A 86 686 66 HOH HOH . R 6 HOH A 87 687 69 HOH HOH . R 6 HOH A 88 688 62 HOH HOH . R 6 HOH A 89 689 74 HOH HOH . R 6 HOH A 90 690 28 HOH HOH . R 6 HOH A 91 691 199 HOH HOH . R 6 HOH A 92 692 22 HOH HOH . R 6 HOH A 93 693 103 HOH HOH . R 6 HOH A 94 694 233 HOH HOH . R 6 HOH A 95 695 12 HOH HOH . R 6 HOH A 96 696 122 HOH HOH . R 6 HOH A 97 697 53 HOH HOH . R 6 HOH A 98 698 109 HOH HOH . R 6 HOH A 99 699 95 HOH HOH . R 6 HOH A 100 700 238 HOH HOH . R 6 HOH A 101 701 191 HOH HOH . R 6 HOH A 102 702 97 HOH HOH . R 6 HOH A 103 703 225 HOH HOH . R 6 HOH A 104 704 130 HOH HOH . R 6 HOH A 105 705 121 HOH HOH . R 6 HOH A 106 706 67 HOH HOH . R 6 HOH A 107 707 196 HOH HOH . R 6 HOH A 108 708 90 HOH HOH . R 6 HOH A 109 709 80 HOH HOH . R 6 HOH A 110 710 206 HOH HOH . R 6 HOH A 111 711 55 HOH HOH . R 6 HOH A 112 712 23 HOH HOH . R 6 HOH A 113 713 82 HOH HOH . R 6 HOH A 114 714 111 HOH HOH . R 6 HOH A 115 715 49 HOH HOH . R 6 HOH A 116 716 198 HOH HOH . R 6 HOH A 117 717 63 HOH HOH . R 6 HOH A 118 718 154 HOH HOH . R 6 HOH A 119 719 39 HOH HOH . R 6 HOH A 120 720 19 HOH HOH . R 6 HOH A 121 721 57 HOH HOH . R 6 HOH A 122 722 72 HOH HOH . R 6 HOH A 123 723 41 HOH HOH . R 6 HOH A 124 724 36 HOH HOH . R 6 HOH A 125 725 59 HOH HOH . R 6 HOH A 126 726 176 HOH HOH . R 6 HOH A 127 727 146 HOH HOH . R 6 HOH A 128 728 141 HOH HOH . R 6 HOH A 129 729 31 HOH HOH . R 6 HOH A 130 730 92 HOH HOH . R 6 HOH A 131 731 40 HOH HOH . R 6 HOH A 132 732 218 HOH HOH . R 6 HOH A 133 733 88 HOH HOH . R 6 HOH A 134 734 229 HOH HOH . R 6 HOH A 135 735 200 HOH HOH . R 6 HOH A 136 736 195 HOH HOH . R 6 HOH A 137 737 117 HOH HOH . R 6 HOH A 138 738 113 HOH HOH . R 6 HOH A 139 739 5 HOH HOH . R 6 HOH A 140 740 112 HOH HOH . R 6 HOH A 141 741 89 HOH HOH . R 6 HOH A 142 742 50 HOH HOH . R 6 HOH A 143 743 94 HOH HOH . R 6 HOH A 144 744 239 HOH HOH . R 6 HOH A 145 745 137 HOH HOH . R 6 HOH A 146 746 219 HOH HOH . R 6 HOH A 147 747 118 HOH HOH . R 6 HOH A 148 748 44 HOH HOH . R 6 HOH A 149 749 58 HOH HOH . R 6 HOH A 150 750 24 HOH HOH . R 6 HOH A 151 751 114 HOH HOH . R 6 HOH A 152 752 13 HOH HOH . R 6 HOH A 153 753 61 HOH HOH . R 6 HOH A 154 754 201 HOH HOH . R 6 HOH A 155 755 32 HOH HOH . R 6 HOH A 156 756 193 HOH HOH . R 6 HOH A 157 757 127 HOH HOH . R 6 HOH A 158 758 85 HOH HOH . R 6 HOH A 159 759 235 HOH HOH . R 6 HOH A 160 760 167 HOH HOH . R 6 HOH A 161 761 173 HOH HOH . R 6 HOH A 162 762 189 HOH HOH . R 6 HOH A 163 763 115 HOH HOH . R 6 HOH A 164 764 208 HOH HOH . R 6 HOH A 165 765 214 HOH HOH . R 6 HOH A 166 766 132 HOH HOH . R 6 HOH A 167 767 139 HOH HOH . R 6 HOH A 168 768 79 HOH HOH . R 6 HOH A 169 769 64 HOH HOH . R 6 HOH A 170 770 98 HOH HOH . R 6 HOH A 171 771 27 HOH HOH . R 6 HOH A 172 772 184 HOH HOH . R 6 HOH A 173 773 227 HOH HOH . R 6 HOH A 174 774 181 HOH HOH . R 6 HOH A 175 775 149 HOH HOH . R 6 HOH A 176 776 220 HOH HOH . R 6 HOH A 177 777 209 HOH HOH . R 6 HOH A 178 778 234 HOH HOH . R 6 HOH A 179 779 236 HOH HOH . R 6 HOH A 180 780 151 HOH HOH . R 6 HOH A 181 781 224 HOH HOH . R 6 HOH A 182 782 232 HOH HOH . R 6 HOH A 183 783 207 HOH HOH . R 6 HOH A 184 784 172 HOH HOH . R 6 HOH A 185 785 77 HOH HOH . R 6 HOH A 186 786 187 HOH HOH . R 6 HOH A 187 787 215 HOH HOH . R 6 HOH A 188 788 213 HOH HOH . R 6 HOH A 189 789 197 HOH HOH . R 6 HOH A 190 790 179 HOH HOH . R 6 HOH A 191 791 222 HOH HOH . R 6 HOH A 192 792 217 HOH HOH . R 6 HOH A 193 793 171 HOH HOH . R 6 HOH A 194 794 226 HOH HOH . R 6 HOH A 195 795 108 HOH HOH . R 6 HOH A 196 796 231 HOH HOH . R 6 HOH A 197 797 186 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 6S5 . . . B 2 19.948 48.739 11.881 1 37.87 ? C6 6S5 501 A 1 HETATM 2 N N1 6S5 . . . B 2 18.73 46.143 12.435 1 36.78 ? N1 6S5 501 A 1 HETATM 3 C C7 6S5 . . . B 2 19.123 47.976 10.834 1 37.59 ? C7 6S5 501 A 1 HETATM 4 C C8 6S5 . . . B 2 18.083 47.093 11.518 1 36 ? C8 6S5 501 A 1 HETATM 5 N N2 6S5 . . . B 2 18.124 42.679 11.431 1 37.15 ? N2 6S5 501 A 1 HETATM 6 C C9 6S5 . . . B 2 19.447 46.871 13.491 1 37.43 ? C9 6S5 501 A 1 HETATM 7 C C10 6S5 . . . B 2 20.542 47.758 12.899 1 37.98 ? C10 6S5 501 A 1 HETATM 8 C C11 6S5 . . . B 2 18.68 44.79 12.402 1 36.46 ? C11 6S5 501 A 1 HETATM 9 C C12 6S5 . . . B 2 17.742 44.105 11.406 1 37.57 ? C12 6S5 501 A 1 HETATM 10 C C13 6S5 . . . B 2 16.299 44.323 11.861 1 36.84 ? C13 6S5 501 A 1 HETATM 11 C C14 6S5 . . . B 2 15.332 43.346 11.242 1 36.4 ? C14 6S5 501 A 1 HETATM 12 C C15 6S5 . . . B 2 15.786 42.134 10.692 1 36.8 ? C15 6S5 501 A 1 HETATM 13 O O2 6S5 . . . B 2 19.297 44.103 13.195 1 38.73 ? O2 6S5 501 A 1 HETATM 14 C C16 6S5 . . . B 2 17.264 41.851 10.577 1 37.84 ? C16 6S5 501 A 1 HETATM 15 C C17 6S5 . . . B 2 14.85 41.216 10.214 1 35.89 ? C17 6S5 501 A 1 HETATM 16 C C18 6S5 . . . B 2 13.495 41.487 10.277 1 32.14 ? C18 6S5 501 A 1 HETATM 17 C C19 6S5 . . . B 2 13.055 42.683 10.794 1 33.17 ? C19 6S5 501 A 1 HETATM 18 C C20 6S5 . . . B 2 13.966 43.614 11.258 1 34.6 ? C20 6S5 501 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 615 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #