data_5KH4
#
_model_server_result.job_id            jh5zbBht82_LfAMbYuD-MA 
_model_server_result.datetime_utc      '2024-11-15 00:39:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kh4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    5KH4 
#
_exptl.entry_id    5KH4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              382.326 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FARNESYL DIPHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.69 
_cell.angle_gamma         90 
_cell.entry_id            5KH4 
_cell.length_a            58.107 
_cell.length_b            44.55 
_cell.length_c            115.542 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KH4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C15 H28 O7 P2' 
_chem_comp.formula_weight    382.326 
_chem_comp.id                FPP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FARNESYL DIPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 FPP sing 70 n n 
C1 C2 FPP sing 71 n n 
C1 H11 FPP sing 72 n n 
C1 H12A FPP sing 73 n n 
O1 PA FPP sing 74 n n 
C2 C3 FPP doub 75 e n 
C2 H2 FPP sing 76 n n 
C3 C4 FPP sing 77 n n 
C3 C5 FPP sing 78 n n 
C4 H41 FPP sing 79 n n 
C4 H42 FPP sing 80 n n 
C4 H43 FPP sing 81 n n 
C5 C6 FPP sing 82 n n 
C5 H51 FPP sing 83 n n 
C5 H52 FPP sing 84 n n 
C6 C7 FPP sing 85 n n 
C6 H61 FPP sing 86 n n 
C6 H62 FPP sing 87 n n 
C7 C8 FPP doub 88 e n 
C7 H7 FPP sing 89 n n 
C8 C10 FPP sing 90 n n 
C8 C9 FPP sing 91 n n 
C10 H101 FPP sing 92 n n 
C10 H102 FPP sing 93 n n 
C10 H103 FPP sing 94 n n 
C9 C11 FPP sing 95 n n 
C9 H91 FPP sing 96 n n 
C9 H92 FPP sing 97 n n 
C11 C12 FPP sing 98 n n 
C11 H111 FPP sing 99 n n 
C11 H112 FPP sing 100 n n 
C12 C13 FPP doub 101 n n 
C12 H12 FPP sing 102 n n 
C13 C14 FPP sing 103 n n 
C13 C15 FPP sing 104 n n 
C14 H141 FPP sing 105 n n 
C14 H142 FPP sing 106 n n 
C14 H143 FPP sing 107 n n 
C15 H151 FPP sing 108 n n 
C15 H152 FPP sing 109 n n 
C15 H153 FPP sing 110 n n 
PA O1A FPP doub 111 n n 
PA O2A FPP sing 112 n n 
PA O3A FPP sing 113 n n 
O2A HOA2 FPP sing 114 n n 
O3A PB FPP sing 115 n n 
PB O1B FPP doub 116 n n 
PB O2B FPP sing 117 n n 
PB O3B FPP sing 118 n n 
O2B HOB2 FPP sing 119 n n 
O3B HOB3 FPP sing 120 n n 
#
_atom_sites.entry_id                     5KH4 
_atom_sites.fract_transf_matrix[1][1]    0.01721 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00263 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022447 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008755 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FPP A 1 301 2 FPP FPP . 
D 2 FPP B 1 301 1 FPP FPP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 FPP . . . D 2 -1.548 -9.468 160.261 1 28.58 ? C1 FPP 301 B 1 
HETATM 2 O O1 FPP . . . D 2 -2.966 -9.304 160.437 1 28.58 ? O1 FPP 301 B 1 
HETATM 3 C C2 FPP . . . D 2 -1.235 -10.939 160.191 1 28.58 ? C2 FPP 301 B 1 
HETATM 4 C C3 FPP . . . D 2 0.008 -11.396 160.146 1 28.58 ? C3 FPP 301 B 1 
HETATM 5 C C4 FPP . . . D 2 1.179 -10.478 160.189 1 28.58 ? C4 FPP 301 B 1 
HETATM 6 C C5 FPP . . . D 2 0.176 -12.879 160.097 1 28.58 ? C5 FPP 301 B 1 
HETATM 7 C C6 FPP . . . D 2 0.343 -13.396 161.532 1 28.58 ? C6 FPP 301 B 1 
HETATM 8 C C7 FPP . . . D 2 0.057 -14.889 161.56 1 28.58 ? C7 FPP 301 B 1 
HETATM 9 C C8 FPP . . . D 2 0.889 -15.821 162.082 1 28.58 ? C8 FPP 301 B 1 
HETATM 10 C C10 FPP . . . D 2 2.199 -15.427 162.718 1 28.58 ? C10 FPP 301 B 1 
HETATM 11 C C9 FPP . . . D 2 0.427 -17.269 161.998 1 28.58 ? C9 FPP 301 B 1 
HETATM 12 C C11 FPP . . . D 2 1.573 -18.289 162.108 1 28.58 ? C11 FPP 301 B 1 
HETATM 13 C C12 FPP . . . D 2 2.762 -17.89 161.262 1 28.58 ? C12 FPP 301 B 1 
HETATM 14 C C13 FPP . . . D 2 3.952 -18.485 161.437 1 28.58 ? C13 FPP 301 B 1 
HETATM 15 C C14 FPP . . . D 2 5.096 -18.023 160.575 1 28.58 ? C14 FPP 301 B 1 
HETATM 16 C C15 FPP . . . D 2 4.138 -19.59 162.45 1 28.58 ? C15 FPP 301 B 1 
HETATM 17 P PA FPP . . . D 2 -3.525 -7.86 160.876 1 28.58 ? PA FPP 301 B 1 
HETATM 18 O O1A FPP . . . D 2 -2.9 -7.426 162.195 1 28.58 ? O1A FPP 301 B 1 
HETATM 19 O O2A FPP . . . D 2 -3.351 -6.969 159.651 1 28.58 ? O2A FPP 301 B 1 
HETATM 20 O O3A FPP . . . D 2 -5.104 -8.099 161.161 1 28.58 ? O3A FPP 301 B 1 
HETATM 21 P PB FPP . . . D 2 -6.081 -6.777 161.296 1 28.58 ? PB FPP 301 B 1 
HETATM 22 O O1B FPP . . . D 2 -6.402 -6.4 159.811 1 28.58 ? O1B FPP 301 B 1 
HETATM 23 O O2B FPP . . . D 2 -7.325 -7.204 162.101 1 28.58 ? O2B FPP 301 B 1 
HETATM 24 O O3B FPP . . . D 2 -5.206 -5.781 162.096 1 28.58 ? O3B FPP 301 B 1 
HETATM 25 H H11 FPP . . . D 2 -1.015 -9.014 161.099 1 23.45 ? H11 FPP 301 B 1 
HETATM 26 H H12A FPP . . . D 2 -1.228 -8.975 159.341 1 23.45 ? H12A FPP 301 B 1 
HETATM 27 H H2 FPP . . . D 2 -2.05 -11.644 160.169 1 23.45 ? H2 FPP 301 B 1 
HETATM 28 H H41 FPP . . . D 2 1.189 -9.96 161.112 1 23.45 ? H41 FPP 301 B 1 
HETATM 29 H H42 FPP . . . D 2 1.11 -9.781 159.394 1 23.45 ? H42 FPP 301 B 1 
HETATM 30 H H43 FPP . . . D 2 2.072 -11.039 160.089 1 23.45 ? H43 FPP 301 B 1 
HETATM 31 H H51 FPP . . . D 2 1.055 -13.136 159.503 1 23.45 ? H51 FPP 301 B 1 
HETATM 32 H H52 FPP . . . D 2 -0.7 -13.339 159.635 1 23.45 ? H52 FPP 301 B 1 
HETATM 33 H H61 FPP . . . D 2 -0.347 -12.873 162.198 1 23.45 ? H61 FPP 301 B 1 
HETATM 34 H H62 FPP . . . D 2 1.362 -13.207 161.878 1 23.45 ? H62 FPP 301 B 1 
HETATM 35 H H7 FPP . . . D 2 -0.862 -15.231 161.115 1 23.45 ? H7 FPP 301 B 1 
HETATM 36 H H101 FPP . . . D 2 2.021 -14.711 163.478 1 23.45 ? H101 FPP 301 B 1 
HETATM 37 H H102 FPP . . . D 2 2.837 -15.01 161.983 1 23.45 ? H102 FPP 301 B 1 
HETATM 38 H H103 FPP . . . D 2 2.658 -16.283 163.14 1 23.45 ? H103 FPP 301 B 1 
HETATM 39 H H91 FPP . . . D 2 -0.092 -17.421 161.049 1 23.45 ? H91 FPP 301 B 1 
HETATM 40 H H92 FPP . . . D 2 -0.292 -17.458 162.797 1 23.45 ? H92 FPP 301 B 1 
HETATM 41 H H111 FPP . . . D 2 1.215 -19.27 161.788 1 23.45 ? H111 FPP 301 B 1 
HETATM 42 H H112 FPP . . . D 2 1.884 -18.372 163.151 1 23.45 ? H112 FPP 301 B 1 
HETATM 43 H H12 FPP . . . D 2 2.661 -17.1 160.536 1 23.45 ? H12 FPP 301 B 1 
HETATM 44 H H141 FPP . . . D 2 5.966 -18.575 160.817 1 23.45 ? H141 FPP 301 B 1 
HETATM 45 H H142 FPP . . . D 2 5.272 -16.992 160.745 1 23.45 ? H142 FPP 301 B 1 
HETATM 46 H H143 FPP . . . D 2 4.853 -18.176 159.555 1 23.45 ? H143 FPP 301 B 1 
HETATM 47 H H151 FPP . . . D 2 3.435 -20.359 162.266 1 23.45 ? H151 FPP 301 B 1 
HETATM 48 H H152 FPP . . . D 2 3.991 -19.203 163.425 1 23.45 ? H152 FPP 301 B 1 
HETATM 49 H H153 FPP . . . D 2 5.119 -19.981 162.37 1 23.45 ? H153 FPP 301 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           49 
#