data_5KH5
#
_model_server_result.job_id            ut2lFUHa93eLdld5-zEw1A 
_model_server_result.datetime_utc      '2024-11-15 03:16:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kh5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    5KH5 
#
_exptl.entry_id    5KH5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              552.686 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-(3-azanyl-3-oxidanylidene-propyl)-5-(1-benzothiophen-5-yl)-1-(phenylmethyl)-~{N}-[(4-propan-2-yloxyphenyl)methyl]pyrazole-4-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5KH5 
_cell.length_a            59.451 
_cell.length_b            117.911 
_cell.length_c            179.693 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KH5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        24 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C32 H32 N4 O3 S' 
_chem_comp.formula_weight    552.686 
_chem_comp.id                6TC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-(3-azanyl-3-oxidanylidene-propyl)-5-(1-benzothiophen-5-yl)-1-(phenylmethyl)-~{N}-[(4-propan-2-yloxyphenyl)methyl]pyrazole-4-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C3 C2 6TC sing 1 n n 
C26 C27 6TC doub 2 n y 
C26 C25 6TC sing 3 n y 
C27 C28 6TC sing 4 n y 
C6 C7 6TC doub 5 n y 
C6 C5 6TC sing 6 n y 
C2 O4 6TC sing 7 n n 
C2 C1 6TC sing 8 n n 
C32 C31 6TC doub 9 n y 
C32 C33 6TC sing 10 n y 
C7 C8 6TC sing 11 n y 
O4 C5 6TC sing 12 n n 
C25 C24 6TC doub 13 n y 
S34 C33 6TC sing 14 n y 
S34 C35 6TC sing 15 n y 
C31 C30 6TC sing 16 n y 
C5 C40 6TC doub 17 n y 
C28 C23 6TC doub 18 n y 
C33 C37 6TC doub 19 n y 
O17 C16 6TC doub 20 n n 
C8 C9 6TC sing 21 n n 
C8 C39 6TC doub 22 n y 
C24 C23 6TC sing 23 n y 
C9 N10 6TC sing 24 n n 
C40 C39 6TC sing 25 n y 
C23 C22 6TC sing 26 n n 
C30 C29 6TC sing 27 n n 
C30 C38 6TC doub 28 n y 
C16 C18 6TC sing 29 n n 
C16 N10 6TC sing 30 n n 
C35 C36 6TC doub 31 n y 
C37 C38 6TC sing 32 n y 
C37 C36 6TC sing 33 n y 
C29 C18 6TC doub 34 n y 
C29 N21 6TC sing 35 n y 
C18 C19 6TC sing 36 n y 
N10 C11 6TC sing 37 n n 
N21 C22 6TC sing 38 n n 
N21 N20 6TC sing 39 n y 
C19 N20 6TC doub 40 n y 
C11 C12 6TC sing 41 n n 
C12 C13 6TC sing 42 n n 
O15 C13 6TC doub 43 n n 
C13 N14 6TC sing 44 n n 
C26 H1 6TC sing 45 n n 
C25 H2 6TC sing 46 n n 
C27 H3 6TC sing 47 n n 
C31 H4 6TC sing 48 n n 
C24 H5 6TC sing 49 n n 
C28 H6 6TC sing 50 n n 
C7 H7 6TC sing 51 n n 
C39 H8 6TC sing 52 n n 
C6 H9 6TC sing 53 n n 
C40 H10 6TC sing 54 n n 
C32 H11 6TC sing 55 n n 
C36 H12 6TC sing 56 n n 
C38 H13 6TC sing 57 n n 
C19 H14 6TC sing 58 n n 
C35 H15 6TC sing 59 n n 
C1 H16 6TC sing 60 n n 
C1 H17 6TC sing 61 n n 
C1 H18 6TC sing 62 n n 
C3 H19 6TC sing 63 n n 
C3 H20 6TC sing 64 n n 
C3 H21 6TC sing 65 n n 
C22 H22 6TC sing 66 n n 
C22 H23 6TC sing 67 n n 
C9 H24 6TC sing 68 n n 
C9 H25 6TC sing 69 n n 
C12 H26 6TC sing 70 n n 
C12 H27 6TC sing 71 n n 
C11 H28 6TC sing 72 n n 
C11 H29 6TC sing 73 n n 
C2 H30 6TC sing 74 n n 
N14 H31 6TC sing 75 n n 
N14 H32 6TC sing 76 n n 
#
_atom_sites.entry_id                     5KH5 
_atom_sites.fract_transf_matrix[1][1]    0.016821 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008481 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005565 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 6TC B 1 301 286 6TC UNL . 
D 3 HOH A 1 301 15 HOH HOH . 
D 3 HOH A 2 302 40 HOH HOH . 
D 3 HOH A 3 303 8 HOH HOH . 
D 3 HOH A 4 304 4 HOH HOH . 
D 3 HOH A 5 305 19 HOH HOH . 
D 3 HOH A 6 306 25 HOH HOH . 
D 3 HOH A 7 307 38 HOH HOH . 
D 3 HOH A 8 308 39 HOH HOH . 
D 3 HOH A 9 309 3 HOH HOH . 
D 3 HOH A 10 310 13 HOH HOH . 
D 3 HOH A 11 311 42 HOH HOH . 
D 3 HOH A 12 312 43 HOH HOH . 
D 3 HOH A 13 313 28 HOH HOH . 
D 3 HOH A 14 314 16 HOH HOH . 
D 3 HOH A 15 315 1 HOH HOH . 
D 3 HOH A 16 316 22 HOH HOH . 
D 3 HOH A 17 317 24 HOH HOH . 
D 3 HOH A 18 318 35 HOH HOH . 
D 3 HOH A 19 319 20 HOH HOH . 
D 3 HOH A 20 320 45 HOH HOH . 
D 3 HOH A 21 321 52 HOH HOH . 
D 3 HOH A 22 322 54 HOH HOH . 
E 3 HOH B 1 401 18 HOH HOH . 
E 3 HOH B 2 402 10 HOH HOH . 
E 3 HOH B 3 403 14 HOH HOH . 
E 3 HOH B 4 404 17 HOH HOH . 
E 3 HOH B 5 405 34 HOH HOH . 
E 3 HOH B 6 406 7 HOH HOH . 
E 3 HOH B 7 407 32 HOH HOH . 
E 3 HOH B 8 408 53 HOH HOH . 
E 3 HOH B 9 409 12 HOH HOH . 
E 3 HOH B 10 410 2 HOH HOH . 
E 3 HOH B 11 411 9 HOH HOH . 
E 3 HOH B 12 412 5 HOH HOH . 
E 3 HOH B 13 413 36 HOH HOH . 
E 3 HOH B 14 414 21 HOH HOH . 
E 3 HOH B 15 415 27 HOH HOH . 
E 3 HOH B 16 416 46 HOH HOH . 
E 3 HOH B 17 417 48 HOH HOH . 
E 3 HOH B 18 418 6 HOH HOH . 
E 3 HOH B 19 419 11 HOH HOH . 
E 3 HOH B 20 420 50 HOH HOH . 
E 3 HOH B 21 421 51 HOH HOH . 
E 3 HOH B 22 422 47 HOH HOH . 
E 3 HOH B 23 423 56 HOH HOH . 
E 3 HOH B 24 424 57 HOH HOH . 
E 3 HOH B 25 425 49 HOH HOH . 
E 3 HOH B 26 426 55 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C26 6TC . . . C 2 1.33 6.45 -8.495 1 99.96 ? C26 6TC 301 B 1 
HETATM 2 C C25 6TC . . . C 2 1.515 7.423 -7.54 1 99.91 ? C25 6TC 301 B 1 
HETATM 3 C C27 6TC . . . C 2 0.42 5.438 -8.282 1 100.09 ? C27 6TC 301 B 1 
HETATM 4 C C31 6TC . . . C 2 -2.295 8.677 -7.431 1 101 ? C31 6TC 301 B 1 
HETATM 5 C C24 6TC . . . C 2 0.785 7.381 -6.373 1 99.95 ? C24 6TC 301 B 1 
HETATM 6 C C28 6TC . . . C 2 -0.309 5.397 -7.114 1 99.95 ? C28 6TC 301 B 1 
HETATM 7 C C7 6TC . . . C 2 -5.236 10.813 -7.819 0.5 100 ? C7 6TC 301 B 1 
HETATM 8 C C39 6TC . . . C 2 -5.923 11.884 -5.808 0.5 99.87 ? C39 6TC 301 B 1 
HETATM 9 C C6 6TC . . . C 2 -4.53 11.937 -8.178 0.5 99.92 ? C6 6TC 301 B 1 
HETATM 10 C C40 6TC . . . C 2 -5.219 13.011 -6.158 0.5 99.76 ? C40 6TC 301 B 1 
HETATM 11 C C32 6TC . . . C 2 -1.756 9.825 -7.956 1 101.18 ? C32 6TC 301 B 1 
HETATM 12 C C36 6TC . . . C 2 -1.514 11.95 -5.02 1 101.51 ? C36 6TC 301 B 1 
HETATM 13 C C38 6TC . . . C 2 -2.372 9.58 -5.211 1 101.09 ? C38 6TC 301 B 1 
HETATM 14 C C19 6TC . . . C 2 -4.267 5.503 -5.017 1 100.15 ? C19 6TC 301 B 1 
HETATM 15 C C35 6TC . . . C 2 -0.989 12.929 -5.826 1 101.5 ? C35 6TC 301 B 1 
HETATM 16 C C37 6TC . . . C 2 -1.837 10.754 -5.711 1 101.36 ? C37 6TC 301 B 1 
HETATM 17 C C30 6TC . . . C 2 -2.593 8.551 -6.096 1 100.91 ? C30 6TC 301 B 1 
HETATM 18 C C18 6TC . . . C 2 -4.404 6.791 -5.587 1 100.32 ? C18 6TC 301 B 1 
HETATM 19 C C23 6TC . . . C 2 -0.128 6.371 -6.157 1 99.97 ? C23 6TC 301 B 1 
HETATM 20 C C8 6TC . . . C 2 -5.931 10.786 -6.634 0.5 99.99 ? C8 6TC 301 B 1 
HETATM 21 C C5 6TC . . . C 2 -4.527 13.026 -7.342 0.5 99.77 ? C5 6TC 301 B 1 
HETATM 22 C C33 6TC . . . C 2 -1.538 10.849 -7.064 1 101.36 ? C33 6TC 301 B 1 
HETATM 23 C C29 6TC . . . C 2 -3.124 7.301 -5.622 1 100.56 ? C29 6TC 301 B 1 
HETATM 24 C C16 6TC . . . C 2 -5.622 7.414 -6.035 1 100.41 ? C16 6TC 301 B 1 
HETATM 25 C C13 6TC . . . C 2 -7.888 8.981 -2.504 1 100.34 ? C13 6TC 301 B 1 
HETATM 26 C C1 6TC . . . C 2 -5.429 15.521 -6.643 0.5 99.15 ? C1 6TC 301 B 1 
HETATM 27 C C3 6TC . . . C 2 -4.107 16.321 -8.555 0.5 99.36 ? C3 6TC 301 B 1 
HETATM 28 C C22 6TC . . . C 2 -0.898 6.349 -4.882 1 100.12 ? C22 6TC 301 B 1 
HETATM 29 C C9 6TC . . . C 2 -6.696 9.572 -6.244 0.5 100.09 ? C9 6TC 301 B 1 
HETATM 30 C C12 6TC . . . C 2 -7.183 8.062 -3.449 1 100.51 ? C12 6TC 301 B 1 
HETATM 31 C C11 6TC . . . C 2 -5.985 8.783 -4.032 1 100.36 ? C11 6TC 301 B 1 
HETATM 32 C C2 6TC . . . C 2 -4.805 15.127 -7.956 0.5 99.37 ? C2 6TC 301 B 1 
HETATM 33 N N20 6TC . . . C 2 -3 5.213 -4.712 1 100.19 ? N20 6TC 301 B 1 
HETATM 34 N N21 6TC . . . C 2 -2.335 6.315 -5.09 1 100.25 ? N21 6TC 301 B 1 
HETATM 35 N N14 6TC . . . C 2 -7.539 8.733 -1.203 1 100.39 ? N14 6TC 301 B 1 
HETATM 36 N N10 6TC . . . C 2 -5.904 8.644 -5.47 1 100.28 ? N10 6TC 301 B 1 
HETATM 37 O O17 6TC . . . C 2 -6.337 6.848 -6.851 1 100.55 ? O17 6TC 301 B 1 
HETATM 38 O O15 6TC . . . C 2 -8.679 9.835 -2.874 1 100.3 ? O15 6TC 301 B 1 
HETATM 39 O O4 6TC . . . C 2 -3.815 14.15 -7.696 0.5 99.62 ? O4 6TC 301 B 1 
HETATM 40 S S34 6TC . . . C 2 -0.883 12.392 -7.447 1 101.63 ? S34 6TC 301 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           254 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           40 
#