data_5KH9
#
_model_server_result.job_id            S2XwV-T6OUc1sj9A0w_sGQ 
_model_server_result.datetime_utc      '2024-10-18 08:30:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kh9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1303}' 
#
_entry.id    5KH9 
#
_exptl.entry_id    5KH9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5KH9 
_cell.length_a            41.434 
_cell.length_b            44.157 
_cell.length_c            56.549 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KH9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 7 A CYS 1113 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc2 A ND1 HIS 9 A HIS 1115 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? 
metalc ? metalc3 A SG CYS 27 A CYS 1133 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc4 A SG CYS 30 A CYS 1136 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc5 A SG CYS 39 A CYS 1145 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc6 A SG CYS 47 A CYS 1153 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc7 A O TYR 50 A TYR 1156 1_555 NA NA NA . A NA 1339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? 
metalc ? metalc8 A O ILE 51 A ILE 1157 1_555 NA NA NA . A NA 1339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc9 A ND1 HIS 54 A HIS 1160 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc10 A NE2 HIS 58 A HIS 1164 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc11 A ND1 HIS 64 A HIS 1170 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc12 A SG CYS 77 A CYS 1183 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc13 A SG CYS 80 A CYS 1186 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc14 NA NA NA . A NA 1339 1_555 OA O HOH . A HOH 1458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5KH9 
_atom_sites.fract_transf_matrix[1][1]    0.024135 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022646 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017684 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1301 201 ZN ZN . 
C 2 ZN A 1 1302 202 ZN ZN . 
D 2 ZN A 1 1303 203 ZN ZN . 
E 3 FMT A 1 1304 1 FMT FMT . 
F 4 6T5 A 1 1305 1 6T5 469 . 
G 5 UNX A 1 1306 1 UNX UNX . 
H 5 UNX A 1 1307 2 UNX UNX . 
I 5 UNX A 1 1308 8 UNX UNX . 
J 5 UNX A 1 1309 10 UNX UNX . 
K 5 UNX A 1 1310 1 UNX UNX . 
L 5 UNX A 1 1311 2 UNX UNX . 
M 5 UNX A 1 1312 3 UNX UNX . 
N 5 UNX A 1 1313 4 UNX UNX . 
O 5 UNX A 1 1314 5 UNX UNX . 
P 5 UNX A 1 1315 6 UNX UNX . 
Q 5 UNX A 1 1316 7 UNX UNX . 
R 5 UNX A 1 1317 8 UNX UNX . 
S 5 UNX A 1 1318 10 UNX UNX . 
T 5 UNX A 1 1319 11 UNX UNX . 
U 5 UNX A 1 1320 13 UNX UNX . 
V 5 UNX A 1 1321 14 UNX UNX . 
W 5 UNX A 1 1322 16 UNX UNX . 
X 5 UNX A 1 1323 17 UNX UNX . 
Y 5 UNX A 1 1324 18 UNX UNX . 
Z 5 UNX A 1 1325 19 UNX UNX . 
AA 5 UNX A 1 1326 20 UNX UNX . 
BA 5 UNX A 1 1327 21 UNX UNX . 
CA 5 UNX A 1 1328 22 UNX UNX . 
DA 5 UNX A 1 1329 23 UNX UNX . 
EA 5 UNX A 1 1330 24 UNX UNX . 
FA 5 UNX A 1 1331 25 UNX UNX . 
GA 5 UNX A 1 1332 26 UNX UNX . 
HA 5 UNX A 1 1333 27 UNX UNX . 
IA 5 UNX A 1 1334 28 UNX UNX . 
JA 5 UNX A 1 1335 29 UNX UNX . 
KA 5 UNX A 1 1336 30 UNX UNX . 
LA 5 UNX A 1 1337 31 UNX UNX . 
MA 5 UNX A 1 1338 32 UNX UNX . 
NA 6 NA A 1 1339 1 NA NA . 
OA 7 HOH A 1 1401 92 HOH HOH . 
OA 7 HOH A 2 1402 61 HOH HOH . 
OA 7 HOH A 3 1403 99 HOH HOH . 
OA 7 HOH A 4 1404 32 HOH HOH . 
OA 7 HOH A 5 1405 270 HOH HOH . 
OA 7 HOH A 6 1406 248 HOH HOH . 
OA 7 HOH A 7 1407 33 HOH HOH . 
OA 7 HOH A 8 1408 212 HOH HOH . 
OA 7 HOH A 9 1409 216 HOH HOH . 
OA 7 HOH A 10 1410 41 HOH HOH . 
OA 7 HOH A 11 1411 252 HOH HOH . 
OA 7 HOH A 12 1412 209 HOH HOH . 
OA 7 HOH A 13 1413 235 HOH HOH . 
OA 7 HOH A 14 1414 63 HOH HOH . 
OA 7 HOH A 15 1415 30 HOH HOH . 
OA 7 HOH A 16 1416 34 HOH HOH . 
OA 7 HOH A 17 1417 305 HOH HOH . 
OA 7 HOH A 18 1418 211 HOH HOH . 
OA 7 HOH A 19 1419 43 HOH HOH . 
OA 7 HOH A 20 1420 100 HOH HOH . 
OA 7 HOH A 21 1421 232 HOH HOH . 
OA 7 HOH A 22 1422 204 HOH HOH . 
OA 7 HOH A 23 1423 255 HOH HOH . 
OA 7 HOH A 24 1424 244 HOH HOH . 
OA 7 HOH A 25 1425 262 HOH HOH . 
OA 7 HOH A 26 1426 341 HOH HOH . 
OA 7 HOH A 27 1427 214 HOH HOH . 
OA 7 HOH A 28 1428 340 HOH HOH . 
OA 7 HOH A 29 1429 206 HOH HOH . 
OA 7 HOH A 30 1430 233 HOH HOH . 
OA 7 HOH A 31 1431 276 HOH HOH . 
OA 7 HOH A 32 1432 98 HOH HOH . 
OA 7 HOH A 33 1433 258 HOH HOH . 
OA 7 HOH A 34 1434 238 HOH HOH . 
OA 7 HOH A 35 1435 20 HOH HOH . 
OA 7 HOH A 36 1436 331 HOH HOH . 
OA 7 HOH A 37 1437 42 HOH HOH . 
OA 7 HOH A 38 1438 225 HOH HOH . 
OA 7 HOH A 39 1439 228 HOH HOH . 
OA 7 HOH A 40 1440 207 HOH HOH . 
OA 7 HOH A 41 1441 249 HOH HOH . 
OA 7 HOH A 42 1442 93 HOH HOH . 
OA 7 HOH A 43 1443 44 HOH HOH . 
OA 7 HOH A 44 1444 237 HOH HOH . 
OA 7 HOH A 45 1445 241 HOH HOH . 
OA 7 HOH A 46 1446 280 HOH HOH . 
OA 7 HOH A 47 1447 37 HOH HOH . 
OA 7 HOH A 48 1448 40 HOH HOH . 
OA 7 HOH A 49 1449 347 HOH HOH . 
OA 7 HOH A 50 1450 88 HOH HOH . 
OA 7 HOH A 51 1451 218 HOH HOH . 
OA 7 HOH A 52 1452 59 HOH HOH . 
OA 7 HOH A 53 1453 210 HOH HOH . 
OA 7 HOH A 54 1454 240 HOH HOH . 
OA 7 HOH A 55 1455 250 HOH HOH . 
OA 7 HOH A 56 1456 283 HOH HOH . 
OA 7 HOH A 57 1457 101 HOH HOH . 
OA 7 HOH A 58 1458 297 HOH HOH . 
OA 7 HOH A 59 1459 239 HOH HOH . 
OA 7 HOH A 60 1460 2 HOH HOH . 
OA 7 HOH A 61 1461 327 HOH HOH . 
OA 7 HOH A 62 1462 261 HOH HOH . 
OA 7 HOH A 63 1463 221 HOH HOH . 
OA 7 HOH A 64 1464 95 HOH HOH . 
OA 7 HOH A 65 1465 76 HOH HOH . 
OA 7 HOH A 66 1466 91 HOH HOH . 
OA 7 HOH A 67 1467 277 HOH HOH . 
OA 7 HOH A 68 1468 97 HOH HOH . 
OA 7 HOH A 69 1469 58 HOH HOH . 
OA 7 HOH A 70 1470 38 HOH HOH . 
OA 7 HOH A 71 1471 279 HOH HOH . 
OA 7 HOH A 72 1472 342 HOH HOH . 
OA 7 HOH A 73 1473 344 HOH HOH . 
OA 7 HOH A 74 1474 356 HOH HOH . 
OA 7 HOH A 75 1475 36 HOH HOH . 
OA 7 HOH A 76 1476 45 HOH HOH . 
OA 7 HOH A 77 1477 94 HOH HOH . 
OA 7 HOH A 78 1478 4 HOH HOH . 
OA 7 HOH A 79 1479 31 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               0.035 
_atom_site.Cartn_y               -5.871 
_atom_site.Cartn_z               -1.293 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        11.94 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1303 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#