data_5KHP # _model_server_result.job_id zYQmj-AjKFNSlxwdxqIqjw _model_server_result.datetime_utc '2024-11-04 20:35:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5khp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":203}' # _entry.id 5KHP # _exptl.entry_id 5KHP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KHP _cell.length_a 114.383 _cell.length_b 114.383 _cell.length_c 117.121 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,S 1 1 B,J,K 2 1 C,L,M,N,O,P,Q,R,T 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 78 A CYS 76 1_555 A SG CYS 177 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf2 B SG CYS 78 B CYS 76 1_555 B SG CYS 177 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 C SG CYS 78 C CYS 76 1_555 C SG CYS 177 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 402 n n S O2 SO4 doub 403 n n S O3 SO4 sing 404 n n S O4 SO4 sing 405 n n # _atom_sites.entry_id 5KHP _atom_sites.fract_transf_matrix[1][1] 0.008743 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008743 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008538 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZR A 1 201 300 ZR ZR . E 3 7K9 A 1 202 301 7K9 CAM . F 4 SO4 A 1 203 3 SO4 SO4 . G 4 SO4 A 1 204 5 SO4 SO4 . H 4 SO4 A 1 205 6 SO4 SO4 . I 4 SO4 A 1 206 7 SO4 SO4 . J 2 ZR B 1 300 300 ZR ZR . K 3 7K9 B 1 301 301 7K9 CAM . L 2 ZR C 1 201 300 ZR ZR . M 3 7K9 C 1 202 301 7K9 CAM . N 4 SO4 C 1 203 1 SO4 SO4 . O 4 SO4 C 1 204 2 SO4 SO4 . P 4 SO4 C 1 205 4 SO4 SO4 . Q 4 SO4 C 1 206 8 SO4 SO4 . R 5 GOL C 1 207 1 GOL GOL . S 6 HOH A 1 301 39 HOH HOH . S 6 HOH A 2 302 60 HOH HOH . S 6 HOH A 3 303 43 HOH HOH . S 6 HOH A 4 304 61 HOH HOH . S 6 HOH A 5 305 31 HOH HOH . S 6 HOH A 6 306 28 HOH HOH . S 6 HOH A 7 307 24 HOH HOH . S 6 HOH A 8 308 52 HOH HOH . S 6 HOH A 9 309 62 HOH HOH . S 6 HOH A 10 310 26 HOH HOH . S 6 HOH A 11 311 51 HOH HOH . S 6 HOH A 12 312 57 HOH HOH . S 6 HOH A 13 313 47 HOH HOH . S 6 HOH A 14 314 25 HOH HOH . S 6 HOH A 15 315 27 HOH HOH . S 6 HOH A 16 316 21 HOH HOH . S 6 HOH A 17 317 29 HOH HOH . S 6 HOH A 18 318 56 HOH HOH . S 6 HOH A 19 319 12 HOH HOH . S 6 HOH A 20 320 49 HOH HOH . S 6 HOH A 21 321 46 HOH HOH . S 6 HOH A 22 322 34 HOH HOH . T 6 HOH C 1 301 38 HOH HOH . T 6 HOH C 2 302 59 HOH HOH . T 6 HOH C 3 303 40 HOH HOH . T 6 HOH C 4 304 23 HOH HOH . T 6 HOH C 5 305 18 HOH HOH . T 6 HOH C 6 306 58 HOH HOH . T 6 HOH C 7 307 54 HOH HOH . T 6 HOH C 8 308 15 HOH HOH . T 6 HOH C 9 309 33 HOH HOH . T 6 HOH C 10 310 37 HOH HOH . T 6 HOH C 11 311 41 HOH HOH . T 6 HOH C 12 312 53 HOH HOH . T 6 HOH C 13 313 42 HOH HOH . T 6 HOH C 14 314 36 HOH HOH . T 6 HOH C 15 315 16 HOH HOH . T 6 HOH C 16 316 48 HOH HOH . T 6 HOH C 17 317 55 HOH HOH . T 6 HOH C 18 318 50 HOH HOH . T 6 HOH C 19 319 13 HOH HOH . T 6 HOH C 20 320 45 HOH HOH . T 6 HOH C 21 321 44 HOH HOH . T 6 HOH C 22 322 2 HOH HOH . T 6 HOH C 23 323 19 HOH HOH . T 6 HOH C 24 324 11 HOH HOH . T 6 HOH C 25 325 35 HOH HOH . T 6 HOH C 26 326 32 HOH HOH . T 6 HOH C 27 327 10 HOH HOH . T 6 HOH C 28 328 30 HOH HOH . T 6 HOH C 29 329 14 HOH HOH . T 6 HOH C 30 330 17 HOH HOH . T 6 HOH C 31 331 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 4 16.217 80.597 74.319 1 84 ? S SO4 203 A 1 HETATM 2 O O1 SO4 . . . F 4 16.969 80.53 73.049 1 84.61 ? O1 SO4 203 A 1 HETATM 3 O O2 SO4 . . . F 4 14.951 79.847 74.142 1 67.55 ? O2 SO4 203 A 1 HETATM 4 O O3 SO4 . . . F 4 17.038 80.023 75.417 1 72.96 ? O3 SO4 203 A 1 HETATM 5 O O4 SO4 . . . F 4 15.922 82.014 74.631 1 87.32 ? O4 SO4 203 A 1 # _model_server_stats.io_time_ms 141 _model_server_stats.parse_time_ms 181 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #