data_5KHW
#
_model_server_result.job_id            YA1Zf8j4VLTgVR0Bw57Yqg 
_model_server_result.datetime_utc      '2024-10-16 16:28:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5khw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1202}' 
#
_entry.id    5KHW 
#
_exptl.entry_id    5KHW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          116.74 
_cell.angle_gamma         90 
_cell.entry_id            5KHW 
_cell.length_a            45.631 
_cell.length_b            146.62 
_cell.length_c            49.936 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KHW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLU 195 A GLU 1033 1_555 A N PTR 196 A PTR 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
covale ? covale2 A C PTR 196 A PTR 1034 1_555 A N PTR 197 A PTR 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale3 A C PTR 197 A PTR 1035 1_555 A N THR 198 A THR 1036 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? 
covale ? covale4 B C GLU 195 B GLU 1033 1_555 B N PTR 196 B PTR 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
covale ? covale5 B C PTR 196 B PTR 1034 1_555 B N PTR 197 B PTR 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? 
covale ? covale6 B C PTR 197 B PTR 1035 1_555 B N THR 198 B THR 1036 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
metalc ? metalc1 A OD1 ASN 170 A ASN 1008 1_555 D MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc2 C O2B ADP . A ADP 1201 1_555 D MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
metalc ? metalc3 C O1A ADP . A ADP 1201 1_555 D MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc4 C O3A ADP . A ADP 1201 1_555 D MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.796 ? 
metalc ? metalc5 B OD1 ASN 170 B ASN 1008 1_555 F MG MG . B MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc6 E O2B ADP . B ADP 1201 1_555 F MG MG . B MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? 
metalc ? metalc7 E O1A ADP . B ADP 1201 1_555 F MG MG . B MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc8 E O3A ADP . B ADP 1201 1_555 F MG MG . B MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5KHW 
_atom_sites.fract_transf_matrix[1][1]    0.021915 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.011041 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00682 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022424 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ADP A 1 1201 4000 ADP PFE . 
D 3 MG A 1 1202 1 MG MG . 
E 2 ADP B 1 1201 4000 ADP PFE . 
F 3 MG B 1 1202 2 MG MG . 
G 4 HOH A 1 1301 57 HOH HOH . 
G 4 HOH A 2 1302 98 HOH HOH . 
G 4 HOH A 3 1303 83 HOH HOH . 
G 4 HOH A 4 1304 101 HOH HOH . 
G 4 HOH A 5 1305 28 HOH HOH . 
G 4 HOH A 6 1306 10 HOH HOH . 
G 4 HOH A 7 1307 50 HOH HOH . 
G 4 HOH A 8 1308 45 HOH HOH . 
G 4 HOH A 9 1309 66 HOH HOH . 
G 4 HOH A 10 1310 94 HOH HOH . 
G 4 HOH A 11 1311 43 HOH HOH . 
G 4 HOH A 12 1312 21 HOH HOH . 
G 4 HOH A 13 1313 95 HOH HOH . 
G 4 HOH A 14 1314 17 HOH HOH . 
G 4 HOH A 15 1315 42 HOH HOH . 
G 4 HOH A 16 1316 61 HOH HOH . 
G 4 HOH A 17 1317 27 HOH HOH . 
G 4 HOH A 18 1318 3 HOH HOH . 
G 4 HOH A 19 1319 56 HOH HOH . 
G 4 HOH A 20 1320 85 HOH HOH . 
G 4 HOH A 21 1321 9 HOH HOH . 
G 4 HOH A 22 1322 78 HOH HOH . 
G 4 HOH A 23 1323 75 HOH HOH . 
G 4 HOH A 24 1324 6 HOH HOH . 
G 4 HOH A 25 1325 82 HOH HOH . 
G 4 HOH A 26 1326 47 HOH HOH . 
G 4 HOH A 27 1327 20 HOH HOH . 
G 4 HOH A 28 1328 71 HOH HOH . 
G 4 HOH A 29 1329 62 HOH HOH . 
G 4 HOH A 30 1330 77 HOH HOH . 
G 4 HOH A 31 1331 12 HOH HOH . 
G 4 HOH A 32 1332 53 HOH HOH . 
G 4 HOH A 33 1333 23 HOH HOH . 
G 4 HOH A 34 1334 69 HOH HOH . 
G 4 HOH A 35 1335 5 HOH HOH . 
G 4 HOH A 36 1336 33 HOH HOH . 
G 4 HOH A 37 1337 96 HOH HOH . 
G 4 HOH A 38 1338 59 HOH HOH . 
G 4 HOH A 39 1339 4 HOH HOH . 
G 4 HOH A 40 1340 44 HOH HOH . 
G 4 HOH A 41 1341 14 HOH HOH . 
G 4 HOH A 42 1342 11 HOH HOH . 
G 4 HOH A 43 1343 13 HOH HOH . 
G 4 HOH A 44 1344 15 HOH HOH . 
G 4 HOH A 45 1345 35 HOH HOH . 
G 4 HOH A 46 1346 48 HOH HOH . 
G 4 HOH A 47 1347 31 HOH HOH . 
G 4 HOH A 48 1348 92 HOH HOH . 
G 4 HOH A 49 1349 74 HOH HOH . 
G 4 HOH A 50 1350 63 HOH HOH . 
H 4 HOH B 1 1301 99 HOH HOH . 
H 4 HOH B 2 1302 103 HOH HOH . 
H 4 HOH B 3 1303 86 HOH HOH . 
H 4 HOH B 4 1304 70 HOH HOH . 
H 4 HOH B 5 1305 68 HOH HOH . 
H 4 HOH B 6 1306 8 HOH HOH . 
H 4 HOH B 7 1307 19 HOH HOH . 
H 4 HOH B 8 1308 29 HOH HOH . 
H 4 HOH B 9 1309 81 HOH HOH . 
H 4 HOH B 10 1310 60 HOH HOH . 
H 4 HOH B 11 1311 100 HOH HOH . 
H 4 HOH B 12 1312 64 HOH HOH . 
H 4 HOH B 13 1313 55 HOH HOH . 
H 4 HOH B 14 1314 97 HOH HOH . 
H 4 HOH B 15 1315 2 HOH HOH . 
H 4 HOH B 16 1316 93 HOH HOH . 
H 4 HOH B 17 1317 72 HOH HOH . 
H 4 HOH B 18 1318 36 HOH HOH . 
H 4 HOH B 19 1319 41 HOH HOH . 
H 4 HOH B 20 1320 54 HOH HOH . 
H 4 HOH B 21 1321 91 HOH HOH . 
H 4 HOH B 22 1322 102 HOH HOH . 
H 4 HOH B 23 1323 49 HOH HOH . 
H 4 HOH B 24 1324 30 HOH HOH . 
H 4 HOH B 25 1325 51 HOH HOH . 
H 4 HOH B 26 1326 34 HOH HOH . 
H 4 HOH B 27 1327 87 HOH HOH . 
H 4 HOH B 28 1328 84 HOH HOH . 
H 4 HOH B 29 1329 7 HOH HOH . 
H 4 HOH B 30 1330 38 HOH HOH . 
H 4 HOH B 31 1331 25 HOH HOH . 
H 4 HOH B 32 1332 37 HOH HOH . 
H 4 HOH B 33 1333 40 HOH HOH . 
H 4 HOH B 34 1334 46 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               43.151 
_atom_site.Cartn_y               -18.443 
_atom_site.Cartn_z               8.276 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.6 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           1202 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#