data_5KI6
#
_model_server_result.job_id            2W_Ga_xYkYOoaUCgLg4mfw 
_model_server_result.datetime_utc      '2024-11-04 20:15:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ki6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":902}' 
#
_entry.id    5KI6 
#
_exptl.entry_id    5KI6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.111 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHENOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.44 
_cell.angle_gamma         90 
_cell.entry_id            5KI6 
_cell.length_a            63.276 
_cell.length_b            107.297 
_cell.length_c            68.855 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KI6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            O3' 
_struct_conn.ptnr1_label_comp_id            6U0 
_struct_conn.ptnr1_label_seq_id             1 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             6U0 
_struct_conn.ptnr1_auth_seq_id              1 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            P 
_struct_conn.ptnr2_label_comp_id            G 
_struct_conn.ptnr2_label_seq_id             2 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             G 
_struct_conn.ptnr2_auth_seq_id              2 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.605 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C6 H6 O' 
_chem_comp.formula_weight    94.111 
_chem_comp.id                IPH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHENOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 IPH doub 341 n y 
C1 C6 IPH sing 342 n y 
C1 O1 IPH sing 343 n n 
C2 C3 IPH sing 344 n y 
C2 H2 IPH sing 345 n n 
C3 C4 IPH doub 346 n y 
C3 H3 IPH sing 347 n n 
C4 C5 IPH sing 348 n y 
C4 H4 IPH sing 349 n n 
C5 C6 IPH doub 350 n y 
C5 H5 IPH sing 351 n n 
C6 H6 IPH sing 352 n n 
O1 HO1 IPH sing 353 n n 
#
_atom_sites.entry_id                     5KI6 
_atom_sites.fract_transf_matrix[1][1]    0.015804 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004966 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00932 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015223 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 IPH A 1 901 1 IPH IPW . 
D 3 IPH A 1 902 2 IPH IPW . 
E 3 IPH A 1 903 3 IPH IPW . 
F 4 HOH A 1 1001 152 HOH HOH . 
F 4 HOH A 2 1002 17 HOH HOH . 
F 4 HOH A 3 1003 1 HOH HOH . 
F 4 HOH A 4 1004 22 HOH HOH . 
F 4 HOH A 5 1005 71 HOH HOH . 
F 4 HOH A 6 1006 3 HOH HOH . 
F 4 HOH A 7 1007 31 HOH HOH . 
F 4 HOH A 8 1008 65 HOH HOH . 
F 4 HOH A 9 1009 67 HOH HOH . 
F 4 HOH A 10 1010 43 HOH HOH . 
F 4 HOH A 11 1011 117 HOH HOH . 
F 4 HOH A 12 1012 10 HOH HOH . 
F 4 HOH A 13 1013 76 HOH HOH . 
F 4 HOH A 14 1014 30 HOH HOH . 
F 4 HOH A 15 1015 102 HOH HOH . 
F 4 HOH A 16 1016 21 HOH HOH . 
F 4 HOH A 17 1017 16 HOH HOH . 
F 4 HOH A 18 1018 81 HOH HOH . 
F 4 HOH A 19 1019 19 HOH HOH . 
F 4 HOH A 20 1020 90 HOH HOH . 
F 4 HOH A 21 1021 160 HOH HOH . 
F 4 HOH A 22 1022 46 HOH HOH . 
F 4 HOH A 23 1023 2 HOH HOH . 
F 4 HOH A 24 1024 94 HOH HOH . 
F 4 HOH A 25 1025 131 HOH HOH . 
F 4 HOH A 26 1026 6 HOH HOH . 
F 4 HOH A 27 1027 87 HOH HOH . 
F 4 HOH A 28 1028 50 HOH HOH . 
F 4 HOH A 29 1029 7 HOH HOH . 
F 4 HOH A 30 1030 85 HOH HOH . 
F 4 HOH A 31 1031 78 HOH HOH . 
F 4 HOH A 32 1032 47 HOH HOH . 
F 4 HOH A 33 1033 45 HOH HOH . 
F 4 HOH A 34 1034 23 HOH HOH . 
F 4 HOH A 35 1035 101 HOH HOH . 
F 4 HOH A 36 1036 79 HOH HOH . 
F 4 HOH A 37 1037 27 HOH HOH . 
F 4 HOH A 38 1038 20 HOH HOH . 
F 4 HOH A 39 1039 9 HOH HOH . 
F 4 HOH A 40 1040 57 HOH HOH . 
F 4 HOH A 41 1041 34 HOH HOH . 
F 4 HOH A 42 1042 150 HOH HOH . 
F 4 HOH A 43 1043 26 HOH HOH . 
F 4 HOH A 44 1044 13 HOH HOH . 
F 4 HOH A 45 1045 40 HOH HOH . 
F 4 HOH A 46 1046 74 HOH HOH . 
F 4 HOH A 47 1047 116 HOH HOH . 
F 4 HOH A 48 1048 130 HOH HOH . 
F 4 HOH A 49 1049 15 HOH HOH . 
F 4 HOH A 50 1050 62 HOH HOH . 
F 4 HOH A 51 1051 99 HOH HOH . 
F 4 HOH A 52 1052 55 HOH HOH . 
F 4 HOH A 53 1053 4 HOH HOH . 
F 4 HOH A 54 1054 103 HOH HOH . 
F 4 HOH A 55 1055 24 HOH HOH . 
F 4 HOH A 56 1056 86 HOH HOH . 
F 4 HOH A 57 1057 37 HOH HOH . 
F 4 HOH A 58 1058 161 HOH HOH . 
F 4 HOH A 59 1059 125 HOH HOH . 
F 4 HOH A 60 1060 5 HOH HOH . 
F 4 HOH A 61 1061 72 HOH HOH . 
F 4 HOH A 62 1062 18 HOH HOH . 
F 4 HOH A 63 1063 53 HOH HOH . 
F 4 HOH A 64 1064 48 HOH HOH . 
F 4 HOH A 65 1065 12 HOH HOH . 
F 4 HOH A 66 1066 49 HOH HOH . 
F 4 HOH A 67 1067 29 HOH HOH . 
F 4 HOH A 68 1068 171 HOH HOH . 
F 4 HOH A 69 1069 42 HOH HOH . 
F 4 HOH A 70 1070 169 HOH HOH . 
F 4 HOH A 71 1071 52 HOH HOH . 
F 4 HOH A 72 1072 83 HOH HOH . 
F 4 HOH A 73 1073 8 HOH HOH . 
F 4 HOH A 74 1074 11 HOH HOH . 
F 4 HOH A 75 1075 135 HOH HOH . 
F 4 HOH A 76 1076 33 HOH HOH . 
F 4 HOH A 77 1077 141 HOH HOH . 
F 4 HOH A 78 1078 168 HOH HOH . 
F 4 HOH A 79 1079 98 HOH HOH . 
F 4 HOH A 80 1080 100 HOH HOH . 
F 4 HOH A 81 1081 35 HOH HOH . 
F 4 HOH A 82 1082 77 HOH HOH . 
F 4 HOH A 83 1083 61 HOH HOH . 
F 4 HOH A 84 1084 64 HOH HOH . 
F 4 HOH A 85 1085 108 HOH HOH . 
F 4 HOH A 86 1086 128 HOH HOH . 
F 4 HOH A 87 1087 44 HOH HOH . 
F 4 HOH A 88 1088 14 HOH HOH . 
F 4 HOH A 89 1089 75 HOH HOH . 
F 4 HOH A 90 1090 93 HOH HOH . 
F 4 HOH A 91 1091 54 HOH HOH . 
F 4 HOH A 92 1092 28 HOH HOH . 
F 4 HOH A 93 1093 106 HOH HOH . 
F 4 HOH A 94 1094 162 HOH HOH . 
F 4 HOH A 95 1095 73 HOH HOH . 
F 4 HOH A 96 1096 69 HOH HOH . 
F 4 HOH A 97 1097 163 HOH HOH . 
F 4 HOH A 98 1098 166 HOH HOH . 
F 4 HOH A 99 1099 170 HOH HOH . 
F 4 HOH A 100 1100 66 HOH HOH . 
G 4 HOH B 1 101 25 HOH HOH . 
G 4 HOH B 2 102 56 HOH HOH . 
G 4 HOH B 3 103 70 HOH HOH . 
G 4 HOH B 4 104 167 HOH HOH . 
G 4 HOH B 5 105 68 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 IPH . . . D 3 -5.241 31.058 57.044 1 69.6 ? C1 IPH 902 A 1 
HETATM 2 C C2 IPH . . . D 3 -3.991 31.603 56.793 1 66.66 ? C2 IPH 902 A 1 
HETATM 3 C C3 IPH . . . D 3 -3.339 31.318 55.603 1 66.21 ? C3 IPH 902 A 1 
HETATM 4 C C4 IPH . . . D 3 -3.937 30.49 54.666 1 67.48 ? C4 IPH 902 A 1 
HETATM 5 C C5 IPH . . . D 3 -5.186 29.946 54.918 1 66.86 ? C5 IPH 902 A 1 
HETATM 6 C C6 IPH . . . D 3 -5.838 30.23 56.107 1 67.61 ? C6 IPH 902 A 1 
HETATM 7 O O1 IPH . . . D 3 -5.907 31.344 58.249 1 71 ? O1 IPH 902 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#