data_5KID # _model_server_result.job_id 4vrvIDdIzmy-BGKtZdifww _model_server_result.datetime_utc '2024-11-08 18:18:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kid # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":204}' # _entry.id 5KID # _exptl.entry_id 5KID _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KID _cell.length_a 115.547 _cell.length_b 115.547 _cell.length_c 118.028 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KID _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,Q 1 1 B,K,L,R 2 1 C,M,N,O,P,S 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 78 A CYS 76 1_555 A SG CYS 177 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? disulf ? disulf2 B SG CYS 78 B CYS 76 1_555 B SG CYS 177 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf3 C SG CYS 78 C CYS 76 1_555 C SG CYS 177 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 402 n n S O2 SO4 doub 403 n n S O3 SO4 sing 404 n n S O4 SO4 sing 405 n n # _atom_sites.entry_id 5KID _atom_sites.fract_transf_matrix[1][1] 0.008654 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008654 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 TH A 1 201 300 TH TH . E 3 7K9 A 1 202 301 7K9 CAM . F 4 SO4 A 1 203 2 SO4 SO4 . G 4 SO4 A 1 204 3 SO4 SO4 . H 5 CL A 1 205 2 CL CL . I 6 GOL A 1 206 1 GOL GOL . J 6 GOL A 1 207 2 GOL GOL . K 2 TH B 1 300 300 TH TH . L 3 7K9 B 1 301 301 7K9 CAM . M 2 TH C 1 201 300 TH TH . N 3 7K9 C 1 202 301 7K9 CAM . O 4 SO4 C 1 203 4 SO4 SO4 . P 5 CL C 1 204 1 CL CL . Q 7 HOH A 1 301 44 HOH HOH . Q 7 HOH A 2 302 82 HOH HOH . Q 7 HOH A 3 303 51 HOH HOH . Q 7 HOH A 4 304 69 HOH HOH . Q 7 HOH A 5 305 80 HOH HOH . Q 7 HOH A 6 306 37 HOH HOH . Q 7 HOH A 7 307 16 HOH HOH . Q 7 HOH A 8 308 10 HOH HOH . Q 7 HOH A 9 309 42 HOH HOH . Q 7 HOH A 10 310 9 HOH HOH . Q 7 HOH A 11 311 71 HOH HOH . Q 7 HOH A 12 312 62 HOH HOH . Q 7 HOH A 13 313 72 HOH HOH . Q 7 HOH A 14 314 76 HOH HOH . Q 7 HOH A 15 315 20 HOH HOH . Q 7 HOH A 16 316 55 HOH HOH . Q 7 HOH A 17 317 31 HOH HOH . Q 7 HOH A 18 318 13 HOH HOH . Q 7 HOH A 19 319 60 HOH HOH . Q 7 HOH A 20 320 88 HOH HOH . R 7 HOH B 1 401 47 HOH HOH . R 7 HOH B 2 402 57 HOH HOH . R 7 HOH B 3 403 66 HOH HOH . R 7 HOH B 4 404 39 HOH HOH . R 7 HOH B 5 405 36 HOH HOH . R 7 HOH B 6 406 83 HOH HOH . R 7 HOH B 7 407 52 HOH HOH . S 7 HOH C 1 301 22 HOH HOH . S 7 HOH C 2 302 50 HOH HOH . S 7 HOH C 3 303 27 HOH HOH . S 7 HOH C 4 304 45 HOH HOH . S 7 HOH C 5 305 78 HOH HOH . S 7 HOH C 6 306 29 HOH HOH . S 7 HOH C 7 307 65 HOH HOH . S 7 HOH C 8 308 58 HOH HOH . S 7 HOH C 9 309 21 HOH HOH . S 7 HOH C 10 310 54 HOH HOH . S 7 HOH C 11 311 15 HOH HOH . S 7 HOH C 12 312 75 HOH HOH . S 7 HOH C 13 313 28 HOH HOH . S 7 HOH C 14 314 18 HOH HOH . S 7 HOH C 15 315 5 HOH HOH . S 7 HOH C 16 316 53 HOH HOH . S 7 HOH C 17 317 8 HOH HOH . S 7 HOH C 18 318 7 HOH HOH . S 7 HOH C 19 319 79 HOH HOH . S 7 HOH C 20 320 23 HOH HOH . S 7 HOH C 21 321 3 HOH HOH . S 7 HOH C 22 322 12 HOH HOH . S 7 HOH C 23 323 14 HOH HOH . S 7 HOH C 24 324 48 HOH HOH . S 7 HOH C 25 325 46 HOH HOH . S 7 HOH C 26 326 61 HOH HOH . S 7 HOH C 27 327 59 HOH HOH . S 7 HOH C 28 328 34 HOH HOH . S 7 HOH C 29 329 81 HOH HOH . S 7 HOH C 30 330 11 HOH HOH . S 7 HOH C 31 331 89 HOH HOH . S 7 HOH C 32 332 33 HOH HOH . S 7 HOH C 33 333 64 HOH HOH . S 7 HOH C 34 334 90 HOH HOH . S 7 HOH C 35 335 32 HOH HOH . S 7 HOH C 36 336 63 HOH HOH . S 7 HOH C 37 337 73 HOH HOH . S 7 HOH C 38 338 77 HOH HOH . S 7 HOH C 39 339 24 HOH HOH . S 7 HOH C 40 340 85 HOH HOH . S 7 HOH C 41 341 56 HOH HOH . S 7 HOH C 42 342 19 HOH HOH . S 7 HOH C 43 343 26 HOH HOH . S 7 HOH C 44 344 87 HOH HOH . S 7 HOH C 45 345 25 HOH HOH . S 7 HOH C 46 346 70 HOH HOH . S 7 HOH C 47 347 6 HOH HOH . S 7 HOH C 48 348 86 HOH HOH . S 7 HOH C 49 349 49 HOH HOH . S 7 HOH C 50 350 30 HOH HOH . S 7 HOH C 51 351 35 HOH HOH . S 7 HOH C 52 352 74 HOH HOH . S 7 HOH C 53 353 17 HOH HOH . S 7 HOH C 54 354 84 HOH HOH . S 7 HOH C 55 355 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 4 27.97 55.032 47.106 1 76.56 ? S SO4 204 A 1 HETATM 2 O O1 SO4 . . . G 4 28.472 54.675 45.746 1 80.33 ? O1 SO4 204 A 1 HETATM 3 O O2 SO4 . . . G 4 26.672 55.735 46.969 1 75.36 ? O2 SO4 204 A 1 HETATM 4 O O3 SO4 . . . G 4 27.853 53.806 47.926 1 72.95 ? O3 SO4 204 A 1 HETATM 5 O O4 SO4 . . . G 4 28.924 55.963 47.756 1 75.48 ? O4 SO4 204 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #