data_5KJB # _model_server_result.job_id vgU4EFDQJ_Xg1oWcB_oRIA _model_server_result.datetime_utc '2024-10-19 15:49:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kjb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":501}' # _entry.id 5KJB # _exptl.entry_id 5KJB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KJB _cell.length_a 118.42 _cell.length_b 124.95 _cell.length_c 203.97 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KJB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F,K 1 1 B,G,L 2 1 C,H,M 3 1 D,I,N 4 1 E,J,O 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 304 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 304 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id F _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id FE2 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id FE2 _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.732 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5KJB _atom_sites.fract_transf_matrix[1][1] 0.008445 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008003 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 FE2 A 1 501 2 FE2 FE2 . G 2 FE2 B 1 501 3 FE2 FE2 . H 2 FE2 C 1 501 4 FE2 FE2 . I 2 FE2 D 1 501 1 FE2 FE2 . J 2 FE2 E 1 501 5 FE2 FE2 . K 3 HOH A 1 601 14 HOH HOH . K 3 HOH A 2 602 9 HOH HOH . K 3 HOH A 3 603 49 HOH HOH . K 3 HOH A 4 604 52 HOH HOH . K 3 HOH A 5 605 6 HOH HOH . K 3 HOH A 6 606 37 HOH HOH . K 3 HOH A 7 607 51 HOH HOH . K 3 HOH A 8 608 35 HOH HOH . K 3 HOH A 9 609 74 HOH HOH . K 3 HOH A 10 610 50 HOH HOH . K 3 HOH A 11 611 4 HOH HOH . K 3 HOH A 12 612 36 HOH HOH . K 3 HOH A 13 613 17 HOH HOH . K 3 HOH A 14 614 40 HOH HOH . K 3 HOH A 15 615 13 HOH HOH . K 3 HOH A 16 616 65 HOH HOH . L 3 HOH B 1 601 66 HOH HOH . L 3 HOH B 2 602 15 HOH HOH . L 3 HOH B 3 603 11 HOH HOH . L 3 HOH B 4 604 54 HOH HOH . L 3 HOH B 5 605 1 HOH HOH . L 3 HOH B 6 606 25 HOH HOH . L 3 HOH B 7 607 8 HOH HOH . L 3 HOH B 8 608 47 HOH HOH . L 3 HOH B 9 609 56 HOH HOH . L 3 HOH B 10 610 46 HOH HOH . L 3 HOH B 11 611 26 HOH HOH . L 3 HOH B 12 612 69 HOH HOH . L 3 HOH B 13 613 58 HOH HOH . L 3 HOH B 14 614 41 HOH HOH . L 3 HOH B 15 615 2 HOH HOH . L 3 HOH B 16 616 34 HOH HOH . L 3 HOH B 17 617 3 HOH HOH . L 3 HOH B 18 618 57 HOH HOH . L 3 HOH B 19 619 59 HOH HOH . L 3 HOH B 20 620 72 HOH HOH . L 3 HOH B 21 621 75 HOH HOH . M 3 HOH C 1 601 63 HOH HOH . M 3 HOH C 2 602 64 HOH HOH . M 3 HOH C 3 603 16 HOH HOH . M 3 HOH C 4 604 48 HOH HOH . M 3 HOH C 5 605 62 HOH HOH . M 3 HOH C 6 606 30 HOH HOH . M 3 HOH C 7 607 42 HOH HOH . M 3 HOH C 8 608 45 HOH HOH . M 3 HOH C 9 609 27 HOH HOH . M 3 HOH C 10 610 43 HOH HOH . M 3 HOH C 11 611 70 HOH HOH . M 3 HOH C 12 612 39 HOH HOH . M 3 HOH C 13 613 20 HOH HOH . M 3 HOH C 14 614 12 HOH HOH . M 3 HOH C 15 615 5 HOH HOH . M 3 HOH C 16 616 67 HOH HOH . M 3 HOH C 17 617 10 HOH HOH . M 3 HOH C 18 618 61 HOH HOH . N 3 HOH D 1 601 32 HOH HOH . N 3 HOH D 2 602 33 HOH HOH . N 3 HOH D 3 603 73 HOH HOH . N 3 HOH D 4 604 38 HOH HOH . N 3 HOH D 5 605 7 HOH HOH . N 3 HOH D 6 606 76 HOH HOH . N 3 HOH D 7 607 68 HOH HOH . N 3 HOH D 8 608 19 HOH HOH . N 3 HOH D 9 609 55 HOH HOH . N 3 HOH D 10 610 71 HOH HOH . N 3 HOH D 11 611 23 HOH HOH . N 3 HOH D 12 612 21 HOH HOH . O 3 HOH E 1 601 60 HOH HOH . O 3 HOH E 2 602 22 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x -13.331 _atom_site.Cartn_y -19.273 _atom_site.Cartn_z 38.221 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 87.3 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 501 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #