data_5KJL # _model_server_result.job_id IP2GDZia0chIqYUd3enpWQ _model_server_result.datetime_utc '2024-12-23 14:15:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kjl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5KJL # _exptl.entry_id 5KJL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KJL _cell.length_a 155.098 _cell.length_b 155.098 _cell.length_c 52.553 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KJL _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 48 A CYS 52 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc2 A SG CYS 51 A CYS 55 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc3 A SG CYS 61 A CYS 65 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc4 A SG CYS 64 A CYS 68 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc5 A SG CYS 70 A CYS 74 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc6 A SG CYS 74 A CYS 78 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc7 A NE2 HIS 82 A HIS 86 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc8 A SG CYS 86 A CYS 90 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc9 A SG CYS 205 A CYS 209 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc10 A SG CYS 258 A CYS 262 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc11 A SG CYS 260 A CYS 264 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc12 A SG CYS 263 A CYS 267 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5KJL _atom_sites.fract_transf_matrix[1][1] 0.006448 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019028 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAM A 1 501 1000 SAM SAM . C 3 ZN A 1 502 1 ZN ZN . D 3 ZN A 1 503 2 ZN ZN . E 3 ZN A 1 504 3 ZN ZN . F 4 HOH A 1 601 113 HOH HOH . F 4 HOH A 2 602 16 HOH HOH . F 4 HOH A 3 603 68 HOH HOH . F 4 HOH A 4 604 106 HOH HOH . F 4 HOH A 5 605 78 HOH HOH . F 4 HOH A 6 606 108 HOH HOH . F 4 HOH A 7 607 64 HOH HOH . F 4 HOH A 8 608 79 HOH HOH . F 4 HOH A 9 609 118 HOH HOH . F 4 HOH A 10 610 13 HOH HOH . F 4 HOH A 11 611 121 HOH HOH . F 4 HOH A 12 612 71 HOH HOH . F 4 HOH A 13 613 100 HOH HOH . F 4 HOH A 14 614 109 HOH HOH . F 4 HOH A 15 615 131 HOH HOH . F 4 HOH A 16 616 97 HOH HOH . F 4 HOH A 17 617 125 HOH HOH . F 4 HOH A 18 618 4 HOH HOH . F 4 HOH A 19 619 62 HOH HOH . F 4 HOH A 20 620 38 HOH HOH . F 4 HOH A 21 621 3 HOH HOH . F 4 HOH A 22 622 80 HOH HOH . F 4 HOH A 23 623 112 HOH HOH . F 4 HOH A 24 624 105 HOH HOH . F 4 HOH A 25 625 103 HOH HOH . F 4 HOH A 26 626 46 HOH HOH . F 4 HOH A 27 627 75 HOH HOH . F 4 HOH A 28 628 124 HOH HOH . F 4 HOH A 29 629 47 HOH HOH . F 4 HOH A 30 630 115 HOH HOH . F 4 HOH A 31 631 6 HOH HOH . F 4 HOH A 32 632 22 HOH HOH . F 4 HOH A 33 633 122 HOH HOH . F 4 HOH A 34 634 63 HOH HOH . F 4 HOH A 35 635 33 HOH HOH . F 4 HOH A 36 636 10 HOH HOH . F 4 HOH A 37 637 129 HOH HOH . F 4 HOH A 38 638 8 HOH HOH . F 4 HOH A 39 639 130 HOH HOH . F 4 HOH A 40 640 53 HOH HOH . F 4 HOH A 41 641 77 HOH HOH . F 4 HOH A 42 642 85 HOH HOH . F 4 HOH A 43 643 34 HOH HOH . F 4 HOH A 44 644 65 HOH HOH . F 4 HOH A 45 645 66 HOH HOH . F 4 HOH A 46 646 83 HOH HOH . F 4 HOH A 47 647 107 HOH HOH . F 4 HOH A 48 648 94 HOH HOH . F 4 HOH A 49 649 104 HOH HOH . F 4 HOH A 50 650 7 HOH HOH . F 4 HOH A 51 651 92 HOH HOH . F 4 HOH A 52 652 9 HOH HOH . F 4 HOH A 53 653 21 HOH HOH . F 4 HOH A 54 654 45 HOH HOH . F 4 HOH A 55 655 96 HOH HOH . F 4 HOH A 56 656 49 HOH HOH . F 4 HOH A 57 657 123 HOH HOH . F 4 HOH A 58 658 81 HOH HOH . F 4 HOH A 59 659 24 HOH HOH . F 4 HOH A 60 660 14 HOH HOH . F 4 HOH A 61 661 88 HOH HOH . F 4 HOH A 62 662 30 HOH HOH . F 4 HOH A 63 663 74 HOH HOH . F 4 HOH A 64 664 35 HOH HOH . F 4 HOH A 65 665 17 HOH HOH . F 4 HOH A 66 666 25 HOH HOH . F 4 HOH A 67 667 20 HOH HOH . F 4 HOH A 68 668 18 HOH HOH . F 4 HOH A 69 669 11 HOH HOH . F 4 HOH A 70 670 72 HOH HOH . F 4 HOH A 71 671 31 HOH HOH . F 4 HOH A 72 672 70 HOH HOH . F 4 HOH A 73 673 93 HOH HOH . F 4 HOH A 74 674 56 HOH HOH . F 4 HOH A 75 675 27 HOH HOH . F 4 HOH A 76 676 133 HOH HOH . F 4 HOH A 77 677 67 HOH HOH . F 4 HOH A 78 678 110 HOH HOH . F 4 HOH A 79 679 50 HOH HOH . F 4 HOH A 80 680 60 HOH HOH . F 4 HOH A 81 681 19 HOH HOH . F 4 HOH A 82 682 52 HOH HOH . F 4 HOH A 83 683 101 HOH HOH . F 4 HOH A 84 684 111 HOH HOH . F 4 HOH A 85 685 69 HOH HOH . F 4 HOH A 86 686 29 HOH HOH . F 4 HOH A 87 687 12 HOH HOH . F 4 HOH A 88 688 114 HOH HOH . F 4 HOH A 89 689 26 HOH HOH . F 4 HOH A 90 690 91 HOH HOH . F 4 HOH A 91 691 89 HOH HOH . F 4 HOH A 92 692 102 HOH HOH . F 4 HOH A 93 693 36 HOH HOH . F 4 HOH A 94 694 58 HOH HOH . F 4 HOH A 95 695 76 HOH HOH . F 4 HOH A 96 696 40 HOH HOH . F 4 HOH A 97 697 23 HOH HOH . F 4 HOH A 98 698 2 HOH HOH . F 4 HOH A 99 699 73 HOH HOH . F 4 HOH A 100 700 95 HOH HOH . F 4 HOH A 101 701 117 HOH HOH . F 4 HOH A 102 702 5 HOH HOH . F 4 HOH A 103 703 98 HOH HOH . F 4 HOH A 104 704 99 HOH HOH . F 4 HOH A 105 705 132 HOH HOH . F 4 HOH A 106 706 44 HOH HOH . F 4 HOH A 107 707 1 HOH HOH . F 4 HOH A 108 708 57 HOH HOH . F 4 HOH A 109 709 120 HOH HOH . F 4 HOH A 110 710 55 HOH HOH . F 4 HOH A 111 711 82 HOH HOH . F 4 HOH A 112 712 126 HOH HOH . F 4 HOH A 113 713 127 HOH HOH . F 4 HOH A 114 714 42 HOH HOH . F 4 HOH A 115 715 116 HOH HOH . F 4 HOH A 116 716 48 HOH HOH . F 4 HOH A 117 717 119 HOH HOH . F 4 HOH A 118 718 54 HOH HOH . F 4 HOH A 119 719 37 HOH HOH . F 4 HOH A 120 720 86 HOH HOH . F 4 HOH A 121 721 15 HOH HOH . F 4 HOH A 122 722 90 HOH HOH . F 4 HOH A 123 723 61 HOH HOH . F 4 HOH A 124 724 87 HOH HOH . F 4 HOH A 125 725 84 HOH HOH . F 4 HOH A 126 726 39 HOH HOH . F 4 HOH A 127 727 41 HOH HOH . F 4 HOH A 128 728 32 HOH HOH . F 4 HOH A 129 729 128 HOH HOH . F 4 HOH A 130 730 51 HOH HOH . F 4 HOH A 131 731 43 HOH HOH . F 4 HOH A 132 732 59 HOH HOH . F 4 HOH A 133 733 28 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -35.604 _atom_site.Cartn_y -1.246 _atom_site.Cartn_z -21.982 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.32 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #