data_5KJM # _model_server_result.job_id 33H045wWew9J7bBQ30Nk8w _model_server_result.datetime_utc '2024-11-25 05:49:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kjm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 5KJM # _exptl.entry_id 5KJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KJM _cell.length_a 156.033 _cell.length_b 156.033 _cell.length_c 52.735 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 48 A CYS 52 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc2 A SG CYS 51 A CYS 55 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc3 A SG CYS 61 A CYS 65 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc4 A SG CYS 64 A CYS 68 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc5 A SG CYS 70 A CYS 74 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc6 A SG CYS 74 A CYS 78 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc7 A NE2 HIS 82 A HIS 86 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc8 A SG CYS 86 A CYS 90 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc9 A SG CYS 205 A CYS 209 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc10 A SG CYS 258 A CYS 262 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc11 A SG CYS 260 A CYS 264 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc12 A SG CYS 263 A CYS 267 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5KJM _atom_sites.fract_transf_matrix[1][1] 0.006409 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006409 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAM A 1 501 1000 SAM SAM . C 3 6TM A 1 502 1 6TM INH . D 4 ZN A 1 503 1 ZN ZN . E 4 ZN A 1 504 2 ZN ZN . F 4 ZN A 1 505 3 ZN ZN . G 5 HOH A 1 601 225 HOH HOH . G 5 HOH A 2 602 93 HOH HOH . G 5 HOH A 3 603 192 HOH HOH . G 5 HOH A 4 604 222 HOH HOH . G 5 HOH A 5 605 16 HOH HOH . G 5 HOH A 6 606 86 HOH HOH . G 5 HOH A 7 607 73 HOH HOH . G 5 HOH A 8 608 223 HOH HOH . G 5 HOH A 9 609 172 HOH HOH . G 5 HOH A 10 610 252 HOH HOH . G 5 HOH A 11 611 246 HOH HOH . G 5 HOH A 12 612 3 HOH HOH . G 5 HOH A 13 613 70 HOH HOH . G 5 HOH A 14 614 241 HOH HOH . G 5 HOH A 15 615 221 HOH HOH . G 5 HOH A 16 616 4 HOH HOH . G 5 HOH A 17 617 218 HOH HOH . G 5 HOH A 18 618 234 HOH HOH . G 5 HOH A 19 619 194 HOH HOH . G 5 HOH A 20 620 10 HOH HOH . G 5 HOH A 21 621 35 HOH HOH . G 5 HOH A 22 622 58 HOH HOH . G 5 HOH A 23 623 62 HOH HOH . G 5 HOH A 24 624 22 HOH HOH . G 5 HOH A 25 625 81 HOH HOH . G 5 HOH A 26 626 51 HOH HOH . G 5 HOH A 27 627 232 HOH HOH . G 5 HOH A 28 628 205 HOH HOH . G 5 HOH A 29 629 214 HOH HOH . G 5 HOH A 30 630 89 HOH HOH . G 5 HOH A 31 631 230 HOH HOH . G 5 HOH A 32 632 255 HOH HOH . G 5 HOH A 33 633 95 HOH HOH . G 5 HOH A 34 634 92 HOH HOH . G 5 HOH A 35 635 17 HOH HOH . G 5 HOH A 36 636 183 HOH HOH . G 5 HOH A 37 637 274 HOH HOH . G 5 HOH A 38 638 90 HOH HOH . G 5 HOH A 39 639 47 HOH HOH . G 5 HOH A 40 640 236 HOH HOH . G 5 HOH A 41 641 96 HOH HOH . G 5 HOH A 42 642 166 HOH HOH . G 5 HOH A 43 643 97 HOH HOH . G 5 HOH A 44 644 27 HOH HOH . G 5 HOH A 45 645 229 HOH HOH . G 5 HOH A 46 646 101 HOH HOH . G 5 HOH A 47 647 168 HOH HOH . G 5 HOH A 48 648 248 HOH HOH . G 5 HOH A 49 649 53 HOH HOH . G 5 HOH A 50 650 253 HOH HOH . G 5 HOH A 51 651 88 HOH HOH . G 5 HOH A 52 652 36 HOH HOH . G 5 HOH A 53 653 215 HOH HOH . G 5 HOH A 54 654 33 HOH HOH . G 5 HOH A 55 655 41 HOH HOH . G 5 HOH A 56 656 99 HOH HOH . G 5 HOH A 57 657 269 HOH HOH . G 5 HOH A 58 658 204 HOH HOH . G 5 HOH A 59 659 8 HOH HOH . G 5 HOH A 60 660 216 HOH HOH . G 5 HOH A 61 661 94 HOH HOH . G 5 HOH A 62 662 260 HOH HOH . G 5 HOH A 63 663 163 HOH HOH . G 5 HOH A 64 664 130 HOH HOH . G 5 HOH A 65 665 239 HOH HOH . G 5 HOH A 66 666 9 HOH HOH . G 5 HOH A 67 667 138 HOH HOH . G 5 HOH A 68 668 110 HOH HOH . G 5 HOH A 69 669 169 HOH HOH . G 5 HOH A 70 670 29 HOH HOH . G 5 HOH A 71 671 5 HOH HOH . G 5 HOH A 72 672 78 HOH HOH . G 5 HOH A 73 673 134 HOH HOH . G 5 HOH A 74 674 46 HOH HOH . G 5 HOH A 75 675 68 HOH HOH . G 5 HOH A 76 676 245 HOH HOH . G 5 HOH A 77 677 66 HOH HOH . G 5 HOH A 78 678 1 HOH HOH . G 5 HOH A 79 679 148 HOH HOH . G 5 HOH A 80 680 177 HOH HOH . G 5 HOH A 81 681 257 HOH HOH . G 5 HOH A 82 682 127 HOH HOH . G 5 HOH A 83 683 84 HOH HOH . G 5 HOH A 84 684 133 HOH HOH . G 5 HOH A 85 685 42 HOH HOH . G 5 HOH A 86 686 165 HOH HOH . G 5 HOH A 87 687 193 HOH HOH . G 5 HOH A 88 688 56 HOH HOH . G 5 HOH A 89 689 231 HOH HOH . G 5 HOH A 90 690 254 HOH HOH . G 5 HOH A 91 691 14 HOH HOH . G 5 HOH A 92 692 82 HOH HOH . G 5 HOH A 93 693 49 HOH HOH . G 5 HOH A 94 694 21 HOH HOH . G 5 HOH A 95 695 12 HOH HOH . G 5 HOH A 96 696 20 HOH HOH . G 5 HOH A 97 697 50 HOH HOH . G 5 HOH A 98 698 220 HOH HOH . G 5 HOH A 99 699 268 HOH HOH . G 5 HOH A 100 700 160 HOH HOH . G 5 HOH A 101 701 108 HOH HOH . G 5 HOH A 102 702 52 HOH HOH . G 5 HOH A 103 703 85 HOH HOH . G 5 HOH A 104 704 264 HOH HOH . G 5 HOH A 105 705 13 HOH HOH . G 5 HOH A 106 706 72 HOH HOH . G 5 HOH A 107 707 147 HOH HOH . G 5 HOH A 108 708 15 HOH HOH . G 5 HOH A 109 709 63 HOH HOH . G 5 HOH A 110 710 155 HOH HOH . G 5 HOH A 111 711 195 HOH HOH . G 5 HOH A 112 712 120 HOH HOH . G 5 HOH A 113 713 243 HOH HOH . G 5 HOH A 114 714 109 HOH HOH . G 5 HOH A 115 715 238 HOH HOH . G 5 HOH A 116 716 48 HOH HOH . G 5 HOH A 117 717 6 HOH HOH . G 5 HOH A 118 718 123 HOH HOH . G 5 HOH A 119 719 164 HOH HOH . G 5 HOH A 120 720 266 HOH HOH . G 5 HOH A 121 721 272 HOH HOH . G 5 HOH A 122 722 262 HOH HOH . G 5 HOH A 123 723 126 HOH HOH . G 5 HOH A 124 724 2 HOH HOH . G 5 HOH A 125 725 132 HOH HOH . G 5 HOH A 126 726 151 HOH HOH . G 5 HOH A 127 727 38 HOH HOH . G 5 HOH A 128 728 122 HOH HOH . G 5 HOH A 129 729 31 HOH HOH . G 5 HOH A 130 730 256 HOH HOH . G 5 HOH A 131 731 64 HOH HOH . G 5 HOH A 132 732 207 HOH HOH . G 5 HOH A 133 733 43 HOH HOH . G 5 HOH A 134 734 267 HOH HOH . G 5 HOH A 135 735 7 HOH HOH . G 5 HOH A 136 736 26 HOH HOH . G 5 HOH A 137 737 226 HOH HOH . G 5 HOH A 138 738 65 HOH HOH . G 5 HOH A 139 739 57 HOH HOH . G 5 HOH A 140 740 181 HOH HOH . G 5 HOH A 141 741 74 HOH HOH . G 5 HOH A 142 742 77 HOH HOH . G 5 HOH A 143 743 102 HOH HOH . G 5 HOH A 144 744 28 HOH HOH . G 5 HOH A 145 745 217 HOH HOH . G 5 HOH A 146 746 39 HOH HOH . G 5 HOH A 147 747 178 HOH HOH . G 5 HOH A 148 748 100 HOH HOH . G 5 HOH A 149 749 44 HOH HOH . G 5 HOH A 150 750 206 HOH HOH . G 5 HOH A 151 751 219 HOH HOH . G 5 HOH A 152 752 25 HOH HOH . G 5 HOH A 153 753 98 HOH HOH . G 5 HOH A 154 754 258 HOH HOH . G 5 HOH A 155 755 106 HOH HOH . G 5 HOH A 156 756 116 HOH HOH . G 5 HOH A 157 757 170 HOH HOH . G 5 HOH A 158 758 37 HOH HOH . G 5 HOH A 159 759 198 HOH HOH . G 5 HOH A 160 760 104 HOH HOH . G 5 HOH A 161 761 137 HOH HOH . G 5 HOH A 162 762 79 HOH HOH . G 5 HOH A 163 763 87 HOH HOH . G 5 HOH A 164 764 157 HOH HOH . G 5 HOH A 165 765 173 HOH HOH . G 5 HOH A 166 766 19 HOH HOH . G 5 HOH A 167 767 30 HOH HOH . G 5 HOH A 168 768 24 HOH HOH . G 5 HOH A 169 769 141 HOH HOH . G 5 HOH A 170 770 179 HOH HOH . G 5 HOH A 171 771 189 HOH HOH . G 5 HOH A 172 772 144 HOH HOH . G 5 HOH A 173 773 136 HOH HOH . G 5 HOH A 174 774 142 HOH HOH . G 5 HOH A 175 775 265 HOH HOH . G 5 HOH A 176 776 152 HOH HOH . G 5 HOH A 177 777 76 HOH HOH . G 5 HOH A 178 778 55 HOH HOH . G 5 HOH A 179 779 117 HOH HOH . G 5 HOH A 180 780 71 HOH HOH . G 5 HOH A 181 781 208 HOH HOH . G 5 HOH A 182 782 69 HOH HOH . G 5 HOH A 183 783 162 HOH HOH . G 5 HOH A 184 784 276 HOH HOH . G 5 HOH A 185 785 176 HOH HOH . G 5 HOH A 186 786 54 HOH HOH . G 5 HOH A 187 787 171 HOH HOH . G 5 HOH A 188 788 121 HOH HOH . G 5 HOH A 189 789 235 HOH HOH . G 5 HOH A 190 790 261 HOH HOH . G 5 HOH A 191 791 59 HOH HOH . G 5 HOH A 192 792 91 HOH HOH . G 5 HOH A 193 793 212 HOH HOH . G 5 HOH A 194 794 197 HOH HOH . G 5 HOH A 195 795 175 HOH HOH . G 5 HOH A 196 796 184 HOH HOH . G 5 HOH A 197 797 139 HOH HOH . G 5 HOH A 198 798 202 HOH HOH . G 5 HOH A 199 799 240 HOH HOH . G 5 HOH A 200 800 75 HOH HOH . G 5 HOH A 201 801 128 HOH HOH . G 5 HOH A 202 802 107 HOH HOH . G 5 HOH A 203 803 118 HOH HOH . G 5 HOH A 204 804 114 HOH HOH . G 5 HOH A 205 805 119 HOH HOH . G 5 HOH A 206 806 156 HOH HOH . G 5 HOH A 207 807 242 HOH HOH . G 5 HOH A 208 808 203 HOH HOH . G 5 HOH A 209 809 125 HOH HOH . G 5 HOH A 210 810 199 HOH HOH . G 5 HOH A 211 811 129 HOH HOH . G 5 HOH A 212 812 191 HOH HOH . G 5 HOH A 213 813 135 HOH HOH . G 5 HOH A 214 814 145 HOH HOH . G 5 HOH A 215 815 244 HOH HOH . G 5 HOH A 216 816 18 HOH HOH . G 5 HOH A 217 817 237 HOH HOH . G 5 HOH A 218 818 80 HOH HOH . G 5 HOH A 219 819 211 HOH HOH . G 5 HOH A 220 820 131 HOH HOH . G 5 HOH A 221 821 45 HOH HOH . G 5 HOH A 222 822 196 HOH HOH . G 5 HOH A 223 823 32 HOH HOH . G 5 HOH A 224 824 200 HOH HOH . G 5 HOH A 225 825 61 HOH HOH . G 5 HOH A 226 826 140 HOH HOH . G 5 HOH A 227 827 182 HOH HOH . G 5 HOH A 228 828 146 HOH HOH . G 5 HOH A 229 829 249 HOH HOH . G 5 HOH A 230 830 153 HOH HOH . G 5 HOH A 231 831 111 HOH HOH . G 5 HOH A 232 832 186 HOH HOH . G 5 HOH A 233 833 233 HOH HOH . G 5 HOH A 234 834 23 HOH HOH . G 5 HOH A 235 835 190 HOH HOH . G 5 HOH A 236 836 273 HOH HOH . G 5 HOH A 237 837 115 HOH HOH . G 5 HOH A 238 838 209 HOH HOH . G 5 HOH A 239 839 263 HOH HOH . G 5 HOH A 240 840 270 HOH HOH . G 5 HOH A 241 841 143 HOH HOH . G 5 HOH A 242 842 247 HOH HOH . G 5 HOH A 243 843 159 HOH HOH . G 5 HOH A 244 844 275 HOH HOH . G 5 HOH A 245 845 150 HOH HOH . G 5 HOH A 246 846 60 HOH HOH . G 5 HOH A 247 847 188 HOH HOH . G 5 HOH A 248 848 103 HOH HOH . G 5 HOH A 249 849 271 HOH HOH . G 5 HOH A 250 850 158 HOH HOH . G 5 HOH A 251 851 34 HOH HOH . G 5 HOH A 252 852 40 HOH HOH . G 5 HOH A 253 853 187 HOH HOH . G 5 HOH A 254 854 180 HOH HOH . G 5 HOH A 255 855 210 HOH HOH . G 5 HOH A 256 856 250 HOH HOH . G 5 HOH A 257 857 227 HOH HOH . G 5 HOH A 258 858 67 HOH HOH . G 5 HOH A 259 859 105 HOH HOH . G 5 HOH A 260 860 124 HOH HOH . G 5 HOH A 261 861 174 HOH HOH . G 5 HOH A 262 862 201 HOH HOH . G 5 HOH A 263 863 224 HOH HOH . G 5 HOH A 264 864 251 HOH HOH . G 5 HOH A 265 865 112 HOH HOH . G 5 HOH A 266 866 83 HOH HOH . G 5 HOH A 267 867 113 HOH HOH . G 5 HOH A 268 868 228 HOH HOH . G 5 HOH A 269 869 154 HOH HOH . G 5 HOH A 270 870 149 HOH HOH . G 5 HOH A 271 871 11 HOH HOH . G 5 HOH A 272 872 167 HOH HOH . G 5 HOH A 273 873 161 HOH HOH . G 5 HOH A 274 874 213 HOH HOH . G 5 HOH A 275 875 185 HOH HOH . G 5 HOH A 276 876 259 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -59.274 _atom_site.Cartn_y 30.928 _atom_site.Cartn_z 11.136 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.26 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 505 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #