data_5KKP # _model_server_result.job_id AQfKcu5rEy1gJ8HaqOLd1A _model_server_result.datetime_utc '2024-11-05 00:28:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kkp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 5KKP # _exptl.entry_id 5KKP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight ? _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN ATOM OR ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KKP _cell.length_a 56.356 _cell.length_b 73.4 _cell.length_c 138.179 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KKP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 171 A THR 269 1_555 A N MSE 172 A MSE 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C MSE 172 A MSE 270 1_555 A N ASP 173 A ASP 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C TYR 191 A TYR 289 1_555 A N MSE 192 A MSE 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale4 A C MSE 192 A MSE 290 1_555 A N GLY 193 A GLY 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.307 ? covale ? covale5 A C LEU 222 A LEU 320 1_555 A N MSE 223 A MSE 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale6 A C MSE 223 A MSE 321 1_555 A N ASN 224 A ASN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale7 A C ALA 264 A ALA 362 1_555 A N MSE 265 A MSE 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale8 A C MSE 265 A MSE 363 1_555 A N ASN 266 A ASN 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? covale ? covale9 A C GLY 278 A GLY 376 1_555 A N MSE 279 A MSE 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? covale ? covale10 A C MSE 279 A MSE 377 1_555 A N GLN 280 A GLN 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale11 A C VAL 304 A VAL 402 1_555 A N MSE 305 A MSE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale12 A C MSE 305 A MSE 403 1_555 A N ASP 306 A ASP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale13 A C GLY 358 A GLY 456 1_555 A N MSE 359 A MSE 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale14 A C MSE 359 A MSE 457 1_555 A N LYS 360 A LYS 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale15 A C LEU 375 A LEU 473 1_555 A N MSE 376 A MSE 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 A C MSE 376 A MSE 474 1_555 A N TYR 377 A TYR 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale17 A C ASN 388 A ASN 486 1_555 A N MSE 389 A MSE 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale18 A C MSE 389 A MSE 487 1_555 A N VAL 390 A VAL 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale19 A C VAL 430 A VAL 528 1_555 A N MSE 431 A MSE 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale20 A C MSE 431 A MSE 529 1_555 A N PRO 432 A PRO 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale21 A C GLU 451 A GLU 549 1_555 A N MSE 452 A MSE 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale22 A C MSE 452 A MSE 550 1_555 A N LEU 453 A LEU 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 A C ASN 462 A ASN 560 1_555 A N MSE 463 A MSE 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale24 A C MSE 463 A MSE 561 1_555 A N ARG 464 A ARG 562 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.327 ? covale ? covale25 A C MSE 463 A MSE 561 1_555 A N ARG 464 A ARG 562 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.334 ? covale ? covale26 A C LYS 526 A LYS 624 1_555 A N MSE 527 A MSE 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale27 A C MSE 527 A MSE 625 1_555 A N ASP 528 A ASP 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale28 A C THR 538 A THR 636 1_555 A N MSE 539 A MSE 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale29 A C MSE 539 A MSE 637 1_555 A N ALA 540 A ALA 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale30 A C LYS 546 A LYS 644 1_555 A N MSE 547 A MSE 645 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.341 ? covale ? covale31 A C LYS 546 A LYS 644 1_555 A N MSE 547 A MSE 645 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.349 ? covale ? covale32 A C MSE 547 A MSE 645 1_555 A N ASP 548 A ASP 646 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale33 A C MSE 547 A MSE 645 1_555 A N ASP 548 A ASP 646 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.35 ? # _chem_comp.formula ? _chem_comp.formula_weight ? _chem_comp.id UNX _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN ATOM OR ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5KKP _atom_sites.fract_transf_matrix[1][1] 0.017744 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013624 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 701 1 EDO EDO . C 3 UNX A 1 702 1001 UNX UNX . D 3 UNX A 1 703 1002 UNX UNX . E 3 UNX A 1 704 1003 UNX UNX . F 4 HOH A 1 801 23 HOH HOH . F 4 HOH A 2 802 44 HOH HOH . F 4 HOH A 3 803 25 HOH HOH . F 4 HOH A 4 804 12 HOH HOH . F 4 HOH A 5 805 7 HOH HOH . F 4 HOH A 6 806 55 HOH HOH . F 4 HOH A 7 807 8 HOH HOH . F 4 HOH A 8 808 68 HOH HOH . F 4 HOH A 9 809 19 HOH HOH . F 4 HOH A 10 810 50 HOH HOH . F 4 HOH A 11 811 5 HOH HOH . F 4 HOH A 12 812 39 HOH HOH . F 4 HOH A 13 813 14 HOH HOH . F 4 HOH A 14 814 4 HOH HOH . F 4 HOH A 15 815 51 HOH HOH . F 4 HOH A 16 816 17 HOH HOH . F 4 HOH A 17 817 33 HOH HOH . F 4 HOH A 18 818 70 HOH HOH . F 4 HOH A 19 819 76 HOH HOH . F 4 HOH A 20 820 52 HOH HOH . F 4 HOH A 21 821 3 HOH HOH . F 4 HOH A 22 822 62 HOH HOH . F 4 HOH A 23 823 9 HOH HOH . F 4 HOH A 24 824 82 HOH HOH . F 4 HOH A 25 825 80 HOH HOH . F 4 HOH A 26 826 58 HOH HOH . F 4 HOH A 27 827 10 HOH HOH . F 4 HOH A 28 828 13 HOH HOH . F 4 HOH A 29 829 22 HOH HOH . F 4 HOH A 30 830 56 HOH HOH . F 4 HOH A 31 831 41 HOH HOH . F 4 HOH A 32 832 81 HOH HOH . F 4 HOH A 33 833 11 HOH HOH . F 4 HOH A 34 834 2 HOH HOH . F 4 HOH A 35 835 74 HOH HOH . F 4 HOH A 36 836 26 HOH HOH . F 4 HOH A 37 837 24 HOH HOH . F 4 HOH A 38 838 30 HOH HOH . F 4 HOH A 39 839 36 HOH HOH . F 4 HOH A 40 840 38 HOH HOH . F 4 HOH A 41 841 75 HOH HOH . F 4 HOH A 42 842 78 HOH HOH . F 4 HOH A 43 843 46 HOH HOH . F 4 HOH A 44 844 6 HOH HOH . F 4 HOH A 45 845 43 HOH HOH . F 4 HOH A 46 846 35 HOH HOH . F 4 HOH A 47 847 71 HOH HOH . F 4 HOH A 48 848 28 HOH HOH . F 4 HOH A 49 849 20 HOH HOH . F 4 HOH A 50 850 49 HOH HOH . F 4 HOH A 51 851 15 HOH HOH . F 4 HOH A 52 852 1 HOH HOH . F 4 HOH A 53 853 47 HOH HOH . F 4 HOH A 54 854 32 HOH HOH . F 4 HOH A 55 855 45 HOH HOH . F 4 HOH A 56 856 83 HOH HOH . F 4 HOH A 57 857 29 HOH HOH . F 4 HOH A 58 858 59 HOH HOH . F 4 HOH A 59 859 37 HOH HOH . F 4 HOH A 60 860 18 HOH HOH . F 4 HOH A 61 861 54 HOH HOH . F 4 HOH A 62 862 31 HOH HOH . F 4 HOH A 63 863 27 HOH HOH . F 4 HOH A 64 864 61 HOH HOH . F 4 HOH A 65 865 21 HOH HOH . F 4 HOH A 66 866 63 HOH HOH . F 4 HOH A 67 867 57 HOH HOH . F 4 HOH A 68 868 77 HOH HOH . F 4 HOH A 69 869 40 HOH HOH . F 4 HOH A 70 870 79 HOH HOH . F 4 HOH A 71 871 60 HOH HOH . F 4 HOH A 72 872 73 HOH HOH . F 4 HOH A 73 873 64 HOH HOH . F 4 HOH A 74 874 65 HOH HOH . F 4 HOH A 75 875 66 HOH HOH . F 4 HOH A 76 876 48 HOH HOH . F 4 HOH A 77 877 34 HOH HOH . F 4 HOH A 78 878 42 HOH HOH . F 4 HOH A 79 879 53 HOH HOH . F 4 HOH A 80 880 67 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol X _atom_site.label_atom_id UNK _atom_site.label_comp_id UNX _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 33.117 _atom_site.Cartn_y 41.732 _atom_site.Cartn_z 20.596 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id UNK _atom_site.auth_comp_id UNX _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #