data_5KMC # _model_server_result.job_id 9wIRn5wlO_4OTDdFhrbT3Q _model_server_result.datetime_utc '2024-10-18 16:21:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kmc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 5KMC # _exptl.entry_id 5KMC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 240.196 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description '[2-(1~{H}-indol-3-yl)ethylamino]phosphonic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec 3.-.-.- # _cell.angle_alpha 90 _cell.angle_beta 94.66 _cell.angle_gamma 90 _cell.entry_id 5KMC _cell.length_a 78.093 _cell.length_b 46.151 _cell.length_c 63.994 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KMC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 115 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 112 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id P1 _struct_conn.ptnr2_label_comp_id 6UU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 6UU _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.766 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H13 N2 O3 P' _chem_comp.formula_weight 240.196 _chem_comp.id 6UU _chem_comp.mon_nstd_flag . _chem_comp.name '[2-(1~{H}-indol-3-yl)ethylamino]phosphonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C14 6UU doub 1 n y C15 C10 6UU sing 2 n y C14 C13 6UU sing 3 n y C10 N9 6UU sing 4 n y C10 C11 6UU doub 5 n y C13 C12 6UU doub 6 n y N9 C8 6UU sing 7 n y C11 C12 6UU sing 8 n y C11 C7 6UU sing 9 n y C8 C7 6UU doub 10 n y C7 C6 6UU sing 11 n n C6 C5 6UU sing 12 n n C5 N4 6UU sing 13 n n N4 P1 6UU sing 14 n n O2 P1 6UU doub 15 n n P1 O3 6UU sing 16 n n P1 O1 6UU sing 17 n n C12 H1 6UU sing 18 n n C13 H2 6UU sing 19 n n C14 H3 6UU sing 20 n n C15 H4 6UU sing 21 n n N4 H5 6UU sing 22 n n C5 H6 6UU sing 23 n n C5 H7 6UU sing 24 n n C6 H8 6UU sing 25 n n C6 H9 6UU sing 26 n n C8 H11 6UU sing 27 n n O3 H12 6UU sing 28 n n O1 H13 6UU sing 29 n n N9 H10 6UU sing 30 n n # _atom_sites.entry_id 5KMC _atom_sites.fract_transf_matrix[1][1] 0.012805 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001044 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021668 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6UU A 1 201 112 6UU 826 . D 3 HOH A 1 301 67 HOH HOH . D 3 HOH A 2 302 234 HOH HOH . D 3 HOH A 3 303 10 HOH HOH . D 3 HOH A 4 304 9 HOH HOH . D 3 HOH A 5 305 128 HOH HOH . D 3 HOH A 6 306 205 HOH HOH . D 3 HOH A 7 307 105 HOH HOH . D 3 HOH A 8 308 16 HOH HOH . D 3 HOH A 9 309 60 HOH HOH . D 3 HOH A 10 310 104 HOH HOH . D 3 HOH A 11 311 68 HOH HOH . D 3 HOH A 12 312 62 HOH HOH . D 3 HOH A 13 313 11 HOH HOH . D 3 HOH A 14 314 86 HOH HOH . D 3 HOH A 15 315 45 HOH HOH . D 3 HOH A 16 316 224 HOH HOH . D 3 HOH A 17 317 167 HOH HOH . D 3 HOH A 18 318 172 HOH HOH . D 3 HOH A 19 319 154 HOH HOH . D 3 HOH A 20 320 140 HOH HOH . D 3 HOH A 21 321 159 HOH HOH . D 3 HOH A 22 322 247 HOH HOH . D 3 HOH A 23 323 23 HOH HOH . D 3 HOH A 24 324 13 HOH HOH . D 3 HOH A 25 325 57 HOH HOH . D 3 HOH A 26 326 93 HOH HOH . D 3 HOH A 27 327 79 HOH HOH . D 3 HOH A 28 328 144 HOH HOH . D 3 HOH A 29 329 119 HOH HOH . D 3 HOH A 30 330 89 HOH HOH . D 3 HOH A 31 331 91 HOH HOH . D 3 HOH A 32 332 211 HOH HOH . D 3 HOH A 33 333 34 HOH HOH . D 3 HOH A 34 334 170 HOH HOH . D 3 HOH A 35 335 27 HOH HOH . D 3 HOH A 36 336 199 HOH HOH . D 3 HOH A 37 337 36 HOH HOH . D 3 HOH A 38 338 113 HOH HOH . D 3 HOH A 39 339 47 HOH HOH . D 3 HOH A 40 340 246 HOH HOH . D 3 HOH A 41 341 85 HOH HOH . D 3 HOH A 42 342 8 HOH HOH . D 3 HOH A 43 343 147 HOH HOH . D 3 HOH A 44 344 3 HOH HOH . D 3 HOH A 45 345 61 HOH HOH . D 3 HOH A 46 346 88 HOH HOH . D 3 HOH A 47 347 21 HOH HOH . D 3 HOH A 48 348 54 HOH HOH . D 3 HOH A 49 349 28 HOH HOH . D 3 HOH A 50 350 133 HOH HOH . D 3 HOH A 51 351 192 HOH HOH . D 3 HOH A 52 352 225 HOH HOH . D 3 HOH A 53 353 41 HOH HOH . D 3 HOH A 54 354 50 HOH HOH . D 3 HOH A 55 355 215 HOH HOH . D 3 HOH A 56 356 15 HOH HOH . D 3 HOH A 57 357 126 HOH HOH . D 3 HOH A 58 358 185 HOH HOH . D 3 HOH A 59 359 78 HOH HOH . D 3 HOH A 60 360 141 HOH HOH . D 3 HOH A 61 361 4 HOH HOH . D 3 HOH A 62 362 155 HOH HOH . D 3 HOH A 63 363 83 HOH HOH . D 3 HOH A 64 364 161 HOH HOH . D 3 HOH A 65 365 157 HOH HOH . D 3 HOH A 66 366 122 HOH HOH . D 3 HOH A 67 367 116 HOH HOH . D 3 HOH A 68 368 228 HOH HOH . D 3 HOH A 69 369 198 HOH HOH . D 3 HOH A 70 370 190 HOH HOH . D 3 HOH A 71 371 132 HOH HOH . D 3 HOH A 72 372 200 HOH HOH . D 3 HOH A 73 373 112 HOH HOH . D 3 HOH A 74 374 59 HOH HOH . D 3 HOH A 75 375 37 HOH HOH . D 3 HOH A 76 376 209 HOH HOH . D 3 HOH A 77 377 75 HOH HOH . D 3 HOH A 78 378 77 HOH HOH . D 3 HOH A 79 379 197 HOH HOH . D 3 HOH A 80 380 136 HOH HOH . D 3 HOH A 81 381 245 HOH HOH . D 3 HOH A 82 382 87 HOH HOH . D 3 HOH A 83 383 53 HOH HOH . D 3 HOH A 84 384 214 HOH HOH . D 3 HOH A 85 385 6 HOH HOH . D 3 HOH A 86 386 175 HOH HOH . D 3 HOH A 87 387 44 HOH HOH . D 3 HOH A 88 388 107 HOH HOH . D 3 HOH A 89 389 171 HOH HOH . D 3 HOH A 90 390 166 HOH HOH . D 3 HOH A 91 391 243 HOH HOH . D 3 HOH A 92 392 189 HOH HOH . D 3 HOH A 93 393 51 HOH HOH . D 3 HOH A 94 394 248 HOH HOH . D 3 HOH A 95 395 229 HOH HOH . D 3 HOH A 96 396 148 HOH HOH . D 3 HOH A 97 397 92 HOH HOH . D 3 HOH A 98 398 95 HOH HOH . D 3 HOH A 99 399 242 HOH HOH . D 3 HOH A 100 400 230 HOH HOH . D 3 HOH A 101 401 2 HOH HOH . D 3 HOH A 102 402 156 HOH HOH . D 3 HOH A 103 403 46 HOH HOH . D 3 HOH A 104 404 123 HOH HOH . D 3 HOH A 105 405 227 HOH HOH . D 3 HOH A 106 406 204 HOH HOH . D 3 HOH A 107 407 207 HOH HOH . D 3 HOH A 108 408 108 HOH HOH . D 3 HOH A 109 409 134 HOH HOH . D 3 HOH A 110 410 179 HOH HOH . D 3 HOH A 111 411 233 HOH HOH . D 3 HOH A 112 412 103 HOH HOH . D 3 HOH A 113 413 241 HOH HOH . D 3 HOH A 114 414 137 HOH HOH . D 3 HOH A 115 415 219 HOH HOH . D 3 HOH A 116 416 109 HOH HOH . D 3 HOH A 117 417 110 HOH HOH . D 3 HOH A 118 418 210 HOH HOH . D 3 HOH A 119 419 96 HOH HOH . D 3 HOH A 120 420 174 HOH HOH . D 3 HOH A 121 421 70 HOH HOH . D 3 HOH A 122 422 193 HOH HOH . D 3 HOH A 123 423 238 HOH HOH . D 3 HOH A 124 424 102 HOH HOH . E 3 HOH B 1 201 150 HOH HOH . E 3 HOH B 2 202 65 HOH HOH . E 3 HOH B 3 203 191 HOH HOH . E 3 HOH B 4 204 183 HOH HOH . E 3 HOH B 5 205 152 HOH HOH . E 3 HOH B 6 206 180 HOH HOH . E 3 HOH B 7 207 160 HOH HOH . E 3 HOH B 8 208 165 HOH HOH . E 3 HOH B 9 209 22 HOH HOH . E 3 HOH B 10 210 43 HOH HOH . E 3 HOH B 11 211 71 HOH HOH . E 3 HOH B 12 212 72 HOH HOH . E 3 HOH B 13 213 222 HOH HOH . E 3 HOH B 14 214 216 HOH HOH . E 3 HOH B 15 215 24 HOH HOH . E 3 HOH B 16 216 31 HOH HOH . E 3 HOH B 17 217 14 HOH HOH . E 3 HOH B 18 218 195 HOH HOH . E 3 HOH B 19 219 5 HOH HOH . E 3 HOH B 20 220 25 HOH HOH . E 3 HOH B 21 221 35 HOH HOH . E 3 HOH B 22 222 97 HOH HOH . E 3 HOH B 23 223 18 HOH HOH . E 3 HOH B 24 224 206 HOH HOH . E 3 HOH B 25 225 212 HOH HOH . E 3 HOH B 26 226 84 HOH HOH . E 3 HOH B 27 227 17 HOH HOH . E 3 HOH B 28 228 29 HOH HOH . E 3 HOH B 29 229 130 HOH HOH . E 3 HOH B 30 230 7 HOH HOH . E 3 HOH B 31 231 38 HOH HOH . E 3 HOH B 32 232 30 HOH HOH . E 3 HOH B 33 233 178 HOH HOH . E 3 HOH B 34 234 120 HOH HOH . E 3 HOH B 35 235 52 HOH HOH . E 3 HOH B 36 236 33 HOH HOH . E 3 HOH B 37 237 186 HOH HOH . E 3 HOH B 38 238 121 HOH HOH . E 3 HOH B 39 239 20 HOH HOH . E 3 HOH B 40 240 124 HOH HOH . E 3 HOH B 41 241 82 HOH HOH . E 3 HOH B 42 242 220 HOH HOH . E 3 HOH B 43 243 100 HOH HOH . E 3 HOH B 44 244 48 HOH HOH . E 3 HOH B 45 245 114 HOH HOH . E 3 HOH B 46 246 181 HOH HOH . E 3 HOH B 47 247 168 HOH HOH . E 3 HOH B 48 248 143 HOH HOH . E 3 HOH B 49 249 101 HOH HOH . E 3 HOH B 50 250 201 HOH HOH . E 3 HOH B 51 251 26 HOH HOH . E 3 HOH B 52 252 76 HOH HOH . E 3 HOH B 53 253 208 HOH HOH . E 3 HOH B 54 254 55 HOH HOH . E 3 HOH B 55 255 237 HOH HOH . E 3 HOH B 56 256 138 HOH HOH . E 3 HOH B 57 257 94 HOH HOH . E 3 HOH B 58 258 153 HOH HOH . E 3 HOH B 59 259 162 HOH HOH . E 3 HOH B 60 260 118 HOH HOH . E 3 HOH B 61 261 66 HOH HOH . E 3 HOH B 62 262 32 HOH HOH . E 3 HOH B 63 263 194 HOH HOH . E 3 HOH B 64 264 217 HOH HOH . E 3 HOH B 65 265 240 HOH HOH . E 3 HOH B 66 266 12 HOH HOH . E 3 HOH B 67 267 40 HOH HOH . E 3 HOH B 68 268 127 HOH HOH . E 3 HOH B 69 269 115 HOH HOH . E 3 HOH B 70 270 69 HOH HOH . E 3 HOH B 71 271 49 HOH HOH . E 3 HOH B 72 272 177 HOH HOH . E 3 HOH B 73 273 131 HOH HOH . E 3 HOH B 74 274 213 HOH HOH . E 3 HOH B 75 275 64 HOH HOH . E 3 HOH B 76 276 202 HOH HOH . E 3 HOH B 77 277 39 HOH HOH . E 3 HOH B 78 278 99 HOH HOH . E 3 HOH B 79 279 236 HOH HOH . E 3 HOH B 80 280 149 HOH HOH . E 3 HOH B 81 281 106 HOH HOH . E 3 HOH B 82 282 19 HOH HOH . E 3 HOH B 83 283 223 HOH HOH . E 3 HOH B 84 284 58 HOH HOH . E 3 HOH B 85 285 81 HOH HOH . E 3 HOH B 86 286 74 HOH HOH . E 3 HOH B 87 287 231 HOH HOH . E 3 HOH B 88 288 117 HOH HOH . E 3 HOH B 89 289 244 HOH HOH . E 3 HOH B 90 290 235 HOH HOH . E 3 HOH B 91 291 111 HOH HOH . E 3 HOH B 92 292 239 HOH HOH . E 3 HOH B 93 293 184 HOH HOH . E 3 HOH B 94 294 218 HOH HOH . E 3 HOH B 95 295 151 HOH HOH . E 3 HOH B 96 296 163 HOH HOH . E 3 HOH B 97 297 90 HOH HOH . E 3 HOH B 98 298 142 HOH HOH . E 3 HOH B 99 299 63 HOH HOH . E 3 HOH B 100 300 125 HOH HOH . E 3 HOH B 101 301 73 HOH HOH . E 3 HOH B 102 302 129 HOH HOH . E 3 HOH B 103 303 145 HOH HOH . E 3 HOH B 104 304 188 HOH HOH . E 3 HOH B 105 305 203 HOH HOH . E 3 HOH B 106 306 56 HOH HOH . E 3 HOH B 107 307 232 HOH HOH . E 3 HOH B 108 308 226 HOH HOH . E 3 HOH B 109 309 173 HOH HOH . E 3 HOH B 110 310 182 HOH HOH . E 3 HOH B 111 311 135 HOH HOH . E 3 HOH B 112 312 187 HOH HOH . E 3 HOH B 113 313 221 HOH HOH . E 3 HOH B 114 314 98 HOH HOH . E 3 HOH B 115 315 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 6UU . . . C 2 -29.043 5.026 -30.04 1 16.59 ? C11 6UU 201 A 1 HETATM 2 C C12 6UU . . . C 2 -27.659 5.013 -30.037 1 18.67 ? C12 6UU 201 A 1 HETATM 3 C C13 6UU . . . C 2 -26.999 4.955 -31.263 1 15.54 ? C13 6UU 201 A 1 HETATM 4 C C14 6UU . . . C 2 -27.713 4.9 -32.463 1 18.49 ? C14 6UU 201 A 1 HETATM 5 C C15 6UU . . . C 2 -29.109 4.91 -32.49 1 16.59 ? C15 6UU 201 A 1 HETATM 6 P P1 6UU . . . C 2 -31.055 3.288 -24.145 1 10.24 ? P1 6UU 201 A 1 HETATM 7 O O2 6UU . . . C 2 -30.663 3.732 -22.756 1 9.1 ? O2 6UU 201 A 1 HETATM 8 N N4 6UU . . . C 2 -30.552 4.476 -25.288 1 10.2 ? N4 6UU 201 A 1 HETATM 9 C C5 6UU . . . C 2 -30.744 4.277 -26.709 1 15.16 ? C5 6UU 201 A 1 HETATM 10 C C6 6UU . . . C 2 -29.745 5.134 -27.478 1 14.68 ? C6 6UU 201 A 1 HETATM 11 C C7 6UU . . . C 2 -30.041 5.072 -28.955 1 18.26 ? C7 6UU 201 A 1 HETATM 12 C C8 6UU . . . C 2 -31.281 5.058 -29.593 1 18.44 ? C8 6UU 201 A 1 HETATM 13 N N9 6UU . . . C 2 -31.111 5 -30.948 1 17.52 ? N9 6UU 201 A 1 HETATM 14 C C10 6UU . . . C 2 -29.811 4.969 -31.293 1 16.31 ? C10 6UU 201 A 1 HETATM 15 O O1 6UU . . . C 2 -32.469 2.796 -24.388 1 9.48 ? O1 6UU 201 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #