data_5KO7
#
_model_server_result.job_id            JtJVLXlcQwXcZRNjrZj3qw 
_model_server_result.datetime_utc      '2024-11-29 00:18:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ko7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    5KO7 
#
_exptl.entry_id    5KO7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5KO7 
_cell.length_a            92.185 
_cell.length_b            110.881 
_cell.length_c            43.288 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KO7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     5KO7 
_atom_sites.fract_transf_matrix[1][1]    0.010848 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009019 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023101 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 301 301 FMN FMN . 
D 2 FMN B 1 301 301 FMN FMN . 
E 3 HOH A 1 401 136 HOH HOH . 
E 3 HOH A 2 402 144 HOH HOH . 
E 3 HOH A 3 403 94 HOH HOH . 
E 3 HOH A 4 404 115 HOH HOH . 
E 3 HOH A 5 405 155 HOH HOH . 
E 3 HOH A 6 406 139 HOH HOH . 
E 3 HOH A 7 407 10 HOH HOH . 
E 3 HOH A 8 408 51 HOH HOH . 
E 3 HOH A 9 409 59 HOH HOH . 
E 3 HOH A 10 410 56 HOH HOH . 
E 3 HOH A 11 411 145 HOH HOH . 
E 3 HOH A 12 412 12 HOH HOH . 
E 3 HOH A 13 413 2 HOH HOH . 
E 3 HOH A 14 414 35 HOH HOH . 
E 3 HOH A 15 415 58 HOH HOH . 
E 3 HOH A 16 416 100 HOH HOH . 
E 3 HOH A 17 417 142 HOH HOH . 
E 3 HOH A 18 418 125 HOH HOH . 
E 3 HOH A 19 419 99 HOH HOH . 
E 3 HOH A 20 420 117 HOH HOH . 
E 3 HOH A 21 421 92 HOH HOH . 
E 3 HOH A 22 422 147 HOH HOH . 
E 3 HOH A 23 423 90 HOH HOH . 
E 3 HOH A 24 424 131 HOH HOH . 
E 3 HOH A 25 425 27 HOH HOH . 
E 3 HOH A 26 426 116 HOH HOH . 
E 3 HOH A 27 427 133 HOH HOH . 
E 3 HOH A 28 428 152 HOH HOH . 
E 3 HOH A 29 429 60 HOH HOH . 
E 3 HOH A 30 430 95 HOH HOH . 
E 3 HOH A 31 431 48 HOH HOH . 
E 3 HOH A 32 432 96 HOH HOH . 
E 3 HOH A 33 433 11 HOH HOH . 
E 3 HOH A 34 434 106 HOH HOH . 
E 3 HOH A 35 435 137 HOH HOH . 
E 3 HOH A 36 436 134 HOH HOH . 
F 3 HOH B 1 401 154 HOH HOH . 
F 3 HOH B 2 402 132 HOH HOH . 
F 3 HOH B 3 403 149 HOH HOH . 
F 3 HOH B 4 404 54 HOH HOH . 
F 3 HOH B 5 405 151 HOH HOH . 
F 3 HOH B 6 406 49 HOH HOH . 
F 3 HOH B 7 407 114 HOH HOH . 
F 3 HOH B 8 408 87 HOH HOH . 
F 3 HOH B 9 409 148 HOH HOH . 
F 3 HOH B 10 410 138 HOH HOH . 
F 3 HOH B 11 411 150 HOH HOH . 
F 3 HOH B 12 412 107 HOH HOH . 
F 3 HOH B 13 413 122 HOH HOH . 
F 3 HOH B 14 414 43 HOH HOH . 
F 3 HOH B 15 415 41 HOH HOH . 
F 3 HOH B 16 416 146 HOH HOH . 
F 3 HOH B 17 417 76 HOH HOH . 
F 3 HOH B 18 418 88 HOH HOH . 
F 3 HOH B 19 419 25 HOH HOH . 
F 3 HOH B 20 420 135 HOH HOH . 
F 3 HOH B 21 421 128 HOH HOH . 
F 3 HOH B 22 422 101 HOH HOH . 
F 3 HOH B 23 423 153 HOH HOH . 
F 3 HOH B 24 424 130 HOH HOH . 
F 3 HOH B 25 425 140 HOH HOH . 
F 3 HOH B 26 426 67 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . D 2 32.549 28.86 13.668 1 59.64 ? N1 FMN 301 B 1 
HETATM 2 C C2 FMN . . . D 2 33.703 29.539 13.331 1 60.91 ? C2 FMN 301 B 1 
HETATM 3 O O2 FMN . . . D 2 34.054 30.51 13.997 1 64.28 ? O2 FMN 301 B 1 
HETATM 4 N N3 FMN . . . D 2 34.46 29.132 12.251 1 58.89 ? N3 FMN 301 B 1 
HETATM 5 C C4 FMN . . . D 2 34.061 28.041 11.506 1 66.39 ? C4 FMN 301 B 1 
HETATM 6 O O4 FMN . . . D 2 34.737 27.678 10.542 1 64.66 ? O4 FMN 301 B 1 
HETATM 7 C C4A FMN . . . D 2 32.899 27.354 11.845 1 63.96 ? C4A FMN 301 B 1 
HETATM 8 N N5 FMN . . . D 2 32.504 26.266 11.099 1 59.71 ? N5 FMN 301 B 1 
HETATM 9 C C5A FMN . . . D 2 31.358 25.584 11.429 1 61.98 ? C5A FMN 301 B 1 
HETATM 10 C C6 FMN . . . D 2 30.983 24.49 10.661 1 57.72 ? C6 FMN 301 B 1 
HETATM 11 C C7 FMN . . . D 2 29.835 23.776 10.962 1 54.44 ? C7 FMN 301 B 1 
HETATM 12 C C7M FMN . . . D 2 29.471 22.597 10.098 1 58.96 ? C7M FMN 301 B 1 
HETATM 13 C C8 FMN . . . D 2 29.062 24.175 12.046 1 57.55 ? C8 FMN 301 B 1 
HETATM 14 C C8M FMN . . . D 2 27.816 23.429 12.405 1 55.09 ? C8M FMN 301 B 1 
HETATM 15 C C9 FMN . . . D 2 29.437 25.271 12.817 1 52.57 ? C9 FMN 301 B 1 
HETATM 16 C C9A FMN . . . D 2 30.59 25.989 12.515 1 57.08 ? C9A FMN 301 B 1 
HETATM 17 N N10 FMN . . . D 2 30.977 27.092 13.273 1 55.65 ? N10 FMN 301 B 1 
HETATM 18 C C10 FMN . . . D 2 32.137 27.769 12.931 1 59.52 ? C10 FMN 301 B 1 
HETATM 19 C C1' FMN . . . D 2 30.174 27.55 14.468 1 51.18 ? C1' FMN 301 B 1 
HETATM 20 C C2' FMN . . . D 2 28.956 28.38 14.071 1 55.01 ? C2' FMN 301 B 1 
HETATM 21 O O2' FMN . . . D 2 29.397 29.596 13.498 1 52.27 ? O2' FMN 301 B 1 
HETATM 22 C C3' FMN . . . D 2 28.058 28.622 15.291 1 56.78 ? C3' FMN 301 B 1 
HETATM 23 O O3' FMN . . . D 2 27.596 27.37 15.764 1 54.36 ? O3' FMN 301 B 1 
HETATM 24 C C4' FMN . . . D 2 26.911 29.585 14.966 1 60.71 ? C4' FMN 301 B 1 
HETATM 25 O O4' FMN . . . D 2 27.42 30.901 14.975 1 50.12 ? O4' FMN 301 B 1 
HETATM 26 C C5' FMN . . . D 2 25.731 29.524 15.938 1 44.91 ? C5' FMN 301 B 1 
HETATM 27 O O5' FMN . . . D 2 26.154 29.606 17.283 1 48.32 ? O5' FMN 301 B 1 
HETATM 28 P P FMN . . . D 2 25.712 28.479 18.347 1 54.91 ? P FMN 301 B 1 
HETATM 29 O O1P FMN . . . D 2 26.303 28.807 19.697 1 49.13 ? O1P FMN 301 B 1 
HETATM 30 O O2P FMN . . . D 2 26.262 27.148 17.894 1 56.33 -1 O2P FMN 301 B 1 
HETATM 31 O O3P FMN . . . D 2 24.208 28.403 18.443 1 47.78 ? O3P FMN 301 B 1 
HETATM 32 H HN3 FMN . . . D 2 35.366 29.599 12.046 1 70.67 ? HN3 FMN 301 B 1 
HETATM 33 H H6 FMN . . . D 2 31.598 24.19 9.812 1 69.26 ? H6 FMN 301 B 1 
HETATM 34 H HM71 FMN . . . D 2 28.547 22.15 10.465 1 70.75 ? HM71 FMN 301 B 1 
HETATM 35 H HM72 FMN . . . D 2 30.272 21.859 10.135 1 70.75 ? HM72 FMN 301 B 1 
HETATM 36 H HM73 FMN . . . D 2 29.331 22.93 9.07 1 70.75 ? HM73 FMN 301 B 1 
HETATM 37 H HM81 FMN . . . D 2 27.357 23.89 13.28 1 66.1 ? HM81 FMN 301 B 1 
HETATM 38 H HM82 FMN . . . D 2 28.066 22.392 12.629 1 66.1 ? HM82 FMN 301 B 1 
HETATM 39 H HM83 FMN . . . D 2 27.119 23.462 11.568 1 66.1 ? HM83 FMN 301 B 1 
HETATM 40 H H9 FMN . . . D 2 28.822 25.57 13.665 1 63.08 ? H9 FMN 301 B 1 
HETATM 41 H "H1'1" FMN . . . D 2 30.813 28.144 15.122 1 61.42 ? "H1'1" FMN 301 B 1 
HETATM 42 H "H1'2" FMN . . . D 2 29.844 26.678 15.033 1 61.42 ? "H1'2" FMN 301 B 1 
HETATM 43 H H2' FMN . . . D 2 28.385 27.817 13.333 1 66.01 ? H2' FMN 301 B 1 
HETATM 44 H HO2' FMN . . . D 2 29.031 30.349 14.007 1 62.73 ? HO2' FMN 301 B 1 
HETATM 45 H H3' FMN . . . D 2 28.669 29.085 16.065 1 68.13 ? H3' FMN 301 B 1 
HETATM 46 H HO3' FMN . . . D 2 26.617 27.371 15.788 1 65.23 ? HO3' FMN 301 B 1 
HETATM 47 H H4' FMN . . . D 2 26.541 29.349 13.968 1 72.85 ? H4' FMN 301 B 1 
HETATM 48 H HO4' FMN . . . D 2 26.898 31.449 15.597 1 60.14 ? HO4' FMN 301 B 1 
HETATM 49 H "H5'1" FMN . . . D 2 25.045 30.344 15.725 1 53.89 ? "H5'1" FMN 301 B 1 
HETATM 50 H "H5'2" FMN . . . D 2 25.188 28.59 15.788 1 53.89 ? "H5'2" FMN 301 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           50 
#