data_5KOW # _model_server_result.job_id tr2CmYLqfiZX1Mlch9nUFQ _model_server_result.datetime_utc '2024-11-28 06:09:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kow # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5KOW # _exptl.entry_id 5KOW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5KOW _cell.length_a 81.489 _cell.length_b 81.489 _cell.length_c 282.224 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KOW _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_554 x,x-y,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 -47.037333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 89 n n PA O2A FAD sing 90 n n PA O5B FAD sing 91 n n PA O3P FAD sing 92 n n O2A HOA2 FAD sing 93 n n O5B C5B FAD sing 94 n n C5B C4B FAD sing 95 n n C5B H51A FAD sing 96 n n C5B H52A FAD sing 97 n n C4B O4B FAD sing 98 n n C4B C3B FAD sing 99 n n C4B H4B FAD sing 100 n n O4B C1B FAD sing 101 n n C3B O3B FAD sing 102 n n C3B C2B FAD sing 103 n n C3B H3B FAD sing 104 n n O3B HO3A FAD sing 105 n n C2B O2B FAD sing 106 n n C2B C1B FAD sing 107 n n C2B H2B FAD sing 108 n n O2B HO2A FAD sing 109 n n C1B N9A FAD sing 110 n n C1B H1B FAD sing 111 n n N9A C8A FAD sing 112 n y N9A C4A FAD sing 113 n y C8A N7A FAD doub 114 n y C8A H8A FAD sing 115 n n N7A C5A FAD sing 116 n y C5A C6A FAD sing 117 n y C5A C4A FAD doub 118 n y C6A N6A FAD sing 119 n n C6A N1A FAD doub 120 n y N6A H61A FAD sing 121 n n N6A H62A FAD sing 122 n n N1A C2A FAD sing 123 n y C2A N3A FAD doub 124 n y C2A H2A FAD sing 125 n n N3A C4A FAD sing 126 n y N1 C2 FAD sing 127 n n N1 C10 FAD doub 128 n n C2 O2 FAD doub 129 n n C2 N3 FAD sing 130 n n N3 C4 FAD sing 131 n n N3 HN3 FAD sing 132 n n C4 O4 FAD doub 133 n n C4 C4X FAD sing 134 n n C4X N5 FAD doub 135 n n C4X C10 FAD sing 136 n n N5 C5X FAD sing 137 n n C5X C6 FAD doub 138 n y C5X C9A FAD sing 139 n y C6 C7 FAD sing 140 n y C6 H6 FAD sing 141 n n C7 C7M FAD sing 142 n n C7 C8 FAD doub 143 n y C7M HM71 FAD sing 144 n n C7M HM72 FAD sing 145 n n C7M HM73 FAD sing 146 n n C8 C8M FAD sing 147 n n C8 C9 FAD sing 148 n y C8M HM81 FAD sing 149 n n C8M HM82 FAD sing 150 n n C8M HM83 FAD sing 151 n n C9 C9A FAD doub 152 n y C9 H9 FAD sing 153 n n C9A N10 FAD sing 154 n n N10 C10 FAD sing 155 n n N10 C1' FAD sing 156 n n C1' C2' FAD sing 157 n n C1' "H1'1" FAD sing 158 n n C1' "H1'2" FAD sing 159 n n C2' O2' FAD sing 160 n n C2' C3' FAD sing 161 n n C2' H2' FAD sing 162 n n O2' HO2' FAD sing 163 n n C3' O3' FAD sing 164 n n C3' C4' FAD sing 165 n n C3' H3' FAD sing 166 n n O3' HO3' FAD sing 167 n n C4' O4' FAD sing 168 n n C4' C5' FAD sing 169 n n C4' H4' FAD sing 170 n n O4' HO4' FAD sing 171 n n C5' O5' FAD sing 172 n n C5' "H5'1" FAD sing 173 n n C5' "H5'2" FAD sing 174 n n O5' P FAD sing 175 n n P O1P FAD doub 176 n n P O2P FAD sing 177 n n P O3P FAD sing 178 n n O2P HOP2 FAD sing 179 n n # _atom_sites.entry_id 5KOW _atom_sites.fract_transf_matrix[1][1] 0.012272 _atom_sites.fract_transf_matrix[1][2] 0.007085 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01417 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003543 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 501 1 FAD FAD . C 3 ACT A 1 502 1 ACT ACT . D 4 HOH A 1 601 53 HOH HOH . D 4 HOH A 2 602 29 HOH HOH . D 4 HOH A 3 603 12 HOH HOH . D 4 HOH A 4 604 3 HOH HOH . D 4 HOH A 5 605 61 HOH HOH . D 4 HOH A 6 606 48 HOH HOH . D 4 HOH A 7 607 33 HOH HOH . D 4 HOH A 8 608 62 HOH HOH . D 4 HOH A 9 609 43 HOH HOH . D 4 HOH A 10 610 25 HOH HOH . D 4 HOH A 11 611 19 HOH HOH . D 4 HOH A 12 612 6 HOH HOH . D 4 HOH A 13 613 54 HOH HOH . D 4 HOH A 14 614 47 HOH HOH . D 4 HOH A 15 615 1 HOH HOH . D 4 HOH A 16 616 10 HOH HOH . D 4 HOH A 17 617 70 HOH HOH . D 4 HOH A 18 618 26 HOH HOH . D 4 HOH A 19 619 17 HOH HOH . D 4 HOH A 20 620 71 HOH HOH . D 4 HOH A 21 621 56 HOH HOH . D 4 HOH A 22 622 23 HOH HOH . D 4 HOH A 23 623 55 HOH HOH . D 4 HOH A 24 624 4 HOH HOH . D 4 HOH A 25 625 20 HOH HOH . D 4 HOH A 26 626 73 HOH HOH . D 4 HOH A 27 627 7 HOH HOH . D 4 HOH A 28 628 21 HOH HOH . D 4 HOH A 29 629 31 HOH HOH . D 4 HOH A 30 630 69 HOH HOH . D 4 HOH A 31 631 38 HOH HOH . D 4 HOH A 32 632 60 HOH HOH . D 4 HOH A 33 633 9 HOH HOH . D 4 HOH A 34 634 2 HOH HOH . D 4 HOH A 35 635 18 HOH HOH . D 4 HOH A 36 636 44 HOH HOH . D 4 HOH A 37 637 22 HOH HOH . D 4 HOH A 38 638 52 HOH HOH . D 4 HOH A 39 639 75 HOH HOH . D 4 HOH A 40 640 15 HOH HOH . D 4 HOH A 41 641 16 HOH HOH . D 4 HOH A 42 642 28 HOH HOH . D 4 HOH A 43 643 41 HOH HOH . D 4 HOH A 44 644 65 HOH HOH . D 4 HOH A 45 645 50 HOH HOH . D 4 HOH A 46 646 13 HOH HOH . D 4 HOH A 47 647 30 HOH HOH . D 4 HOH A 48 648 27 HOH HOH . D 4 HOH A 49 649 68 HOH HOH . D 4 HOH A 50 650 8 HOH HOH . D 4 HOH A 51 651 74 HOH HOH . D 4 HOH A 52 652 58 HOH HOH . D 4 HOH A 53 653 57 HOH HOH . D 4 HOH A 54 654 32 HOH HOH . D 4 HOH A 55 655 35 HOH HOH . D 4 HOH A 56 656 39 HOH HOH . D 4 HOH A 57 657 14 HOH HOH . D 4 HOH A 58 658 72 HOH HOH . D 4 HOH A 59 659 49 HOH HOH . D 4 HOH A 60 660 11 HOH HOH . D 4 HOH A 61 661 42 HOH HOH . D 4 HOH A 62 662 63 HOH HOH . D 4 HOH A 63 663 5 HOH HOH . D 4 HOH A 64 664 40 HOH HOH . D 4 HOH A 65 665 24 HOH HOH . D 4 HOH A 66 666 46 HOH HOH . D 4 HOH A 67 667 59 HOH HOH . D 4 HOH A 68 668 45 HOH HOH . D 4 HOH A 69 669 51 HOH HOH . D 4 HOH A 70 670 76 HOH HOH . D 4 HOH A 71 671 36 HOH HOH . D 4 HOH A 72 672 67 HOH HOH . D 4 HOH A 73 673 34 HOH HOH . D 4 HOH A 74 674 64 HOH HOH . D 4 HOH A 75 675 37 HOH HOH . D 4 HOH A 76 676 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 9.239 38.075 -13.424 1 18.28 ? PA FAD 501 A 1 HETATM 2 O O1A FAD . . . B 2 8.28 38.091 -14.566 1 18.25 ? O1A FAD 501 A 1 HETATM 3 O O2A FAD . . . B 2 10.551 38.184 -13.698 1 17.74 ? O2A FAD 501 A 1 HETATM 4 O O5B FAD . . . B 2 8.762 39.335 -12.717 1 21.54 ? O5B FAD 501 A 1 HETATM 5 C C5B FAD . . . B 2 9.287 39.876 -11.455 1 18.08 ? C5B FAD 501 A 1 HETATM 6 C C4B FAD . . . B 2 8.889 41.413 -11.362 1 17.4 ? C4B FAD 501 A 1 HETATM 7 O O4B FAD . . . B 2 9.708 41.999 -10.264 1 16.44 ? O4B FAD 501 A 1 HETATM 8 C C3B FAD . . . B 2 9.188 42.343 -12.595 1 16.2 ? C3B FAD 501 A 1 HETATM 9 O O3B FAD . . . B 2 8.016 42.975 -13.012 1 16.01 ? O3B FAD 501 A 1 HETATM 10 C C2B FAD . . . B 2 10.349 43.28 -12.102 1 12.74 ? C2B FAD 501 A 1 HETATM 11 O O2B FAD . . . B 2 10.236 44.602 -12.582 1 16.17 ? O2B FAD 501 A 1 HETATM 12 C C1B FAD . . . B 2 10.014 43.37 -10.643 1 16.25 ? C1B FAD 501 A 1 HETATM 13 N N9A FAD . . . B 2 11.108 43.661 -9.731 1 18.72 ? N9A FAD 501 A 1 HETATM 14 C C8A FAD . . . B 2 12.411 43.212 -9.818 1 14.25 ? C8A FAD 501 A 1 HETATM 15 N N7A FAD . . . B 2 13.156 43.641 -8.797 1 16.63 ? N7A FAD 501 A 1 HETATM 16 C C5A FAD . . . B 2 12.307 44.401 -8.029 1 18.36 ? C5A FAD 501 A 1 HETATM 17 C C6A FAD . . . B 2 12.525 45.153 -6.796 1 18.85 ? C6A FAD 501 A 1 HETATM 18 N N6A FAD . . . B 2 13.681 45.212 -6.186 1 16.53 ? N6A FAD 501 A 1 HETATM 19 N N1A FAD . . . B 2 11.412 45.803 -6.313 1 13.57 ? N1A FAD 501 A 1 HETATM 20 C C2A FAD . . . B 2 10.202 45.745 -6.943 1 14.15 ? C2A FAD 501 A 1 HETATM 21 N N3A FAD . . . B 2 9.913 45.097 -8.08 1 22.97 ? N3A FAD 501 A 1 HETATM 22 C C4A FAD . . . B 2 11.001 44.435 -8.584 1 21.38 ? C4A FAD 501 A 1 HETATM 23 N N1 FAD . . . B 2 7.967 30.092 -19.15 1 19.68 ? N1 FAD 501 A 1 HETATM 24 C C2 FAD . . . B 2 7.134 29.135 -19.548 1 21.96 ? C2 FAD 501 A 1 HETATM 25 O O2 FAD . . . B 2 6.47 28.474 -18.783 1 15.45 ? O2 FAD 501 A 1 HETATM 26 N N3 FAD . . . B 2 6.957 28.817 -20.918 1 24.88 ? N3 FAD 501 A 1 HETATM 27 C C4 FAD . . . B 2 7.625 29.492 -21.901 1 21.88 ? C4 FAD 501 A 1 HETATM 28 O O4 FAD . . . B 2 7.436 29.198 -23.056 1 23.18 ? O4 FAD 501 A 1 HETATM 29 C C4X FAD . . . B 2 8.531 30.54 -21.481 1 18.7 ? C4X FAD 501 A 1 HETATM 30 N N5 FAD . . . B 2 9.208 31.224 -22.423 1 20.52 ? N5 FAD 501 A 1 HETATM 31 C C5X FAD . . . B 2 10.051 32.197 -21.985 1 19.63 ? C5X FAD 501 A 1 HETATM 32 C C6 FAD . . . B 2 10.756 32.912 -22.971 1 24.35 ? C6 FAD 501 A 1 HETATM 33 C C7 FAD . . . B 2 11.632 33.907 -22.611 1 29.53 ? C7 FAD 501 A 1 HETATM 34 C C7M FAD . . . B 2 12.384 34.678 -23.655 1 30.85 ? C7M FAD 501 A 1 HETATM 35 C C8 FAD . . . B 2 11.844 34.241 -21.232 1 31.41 ? C8 FAD 501 A 1 HETATM 36 C C8M FAD . . . B 2 12.804 35.341 -20.841 1 21.44 ? C8M FAD 501 A 1 HETATM 37 C C9 FAD . . . B 2 11.143 33.53 -20.245 1 25.93 ? C9 FAD 501 A 1 HETATM 38 C C9A FAD . . . B 2 10.255 32.52 -20.616 1 20.28 ? C9A FAD 501 A 1 HETATM 39 N N10 FAD . . . B 2 9.506 31.765 -19.656 1 19.47 ? N10 FAD 501 A 1 HETATM 40 C C10 FAD . . . B 2 8.678 30.802 -20.055 1 17.42 ? C10 FAD 501 A 1 HETATM 41 C C1' FAD . . . B 2 9.704 32.064 -18.218 1 21.83 ? C1' FAD 501 A 1 HETATM 42 C C2' FAD . . . B 2 8.742 33.141 -17.654 1 19.8 ? C2' FAD 501 A 1 HETATM 43 O O2' FAD . . . B 2 8.806 34.305 -18.479 1 19.35 ? O2' FAD 501 A 1 HETATM 44 C C3' FAD . . . B 2 9.217 33.513 -16.251 1 17.77 ? C3' FAD 501 A 1 HETATM 45 O O3' FAD . . . B 2 9.441 32.338 -15.46 1 11.69 ? O3' FAD 501 A 1 HETATM 46 C C4' FAD . . . B 2 8.092 34.329 -15.584 1 16.82 ? C4' FAD 501 A 1 HETATM 47 O O4' FAD . . . B 2 8.135 35.681 -16.022 1 12.6 ? O4' FAD 501 A 1 HETATM 48 C C5' FAD . . . B 2 8.278 34.239 -14.098 1 12.46 ? C5' FAD 501 A 1 HETATM 49 O O5' FAD . . . B 2 7.428 35.369 -13.46 1 17.9 ? O5' FAD 501 A 1 HETATM 50 P P FAD . . . B 2 7.802 35.971 -12.123 1 17.88 ? P FAD 501 A 1 HETATM 51 O O1P FAD . . . B 2 6.586 36.859 -11.781 1 16.1 ? O1P FAD 501 A 1 HETATM 52 O O2P FAD . . . B 2 8.216 35.037 -11.162 1 13.22 ? O2P FAD 501 A 1 HETATM 53 O O3P FAD . . . B 2 8.944 36.856 -12.365 1 14.61 ? O3P FAD 501 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 53 #