data_5KPO # _model_server_result.job_id BTGClkC0zMGPBWuCIcf9vA _model_server_result.datetime_utc '2024-11-24 19:17:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kpo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 5KPO # _exptl.entry_id 5KPO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 424.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[[3-(4-ethyl-3-oxidanylidene-piperazin-1-yl)carbonyl-4-fluoranyl-phenyl]methyl]quinazoline-2,4-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KPO _cell.length_a 48.34 _cell.length_b 92.36 _cell.length_c 163.44 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KPO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C22 H21 F N4 O4' _chem_comp.formula_weight 424.425 _chem_comp.id 6WY _chem_comp.mon_nstd_flag . _chem_comp.name 1-[[3-(4-ethyl-3-oxidanylidene-piperazin-1-yl)carbonyl-4-fluoranyl-phenyl]methyl]quinazoline-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAD CAY 6WY doub 1 n n NAS CAY 6WY sing 2 n n NAS CAZ 6WY sing 3 n n CAY CBA 6WY sing 4 n n OAE CAZ 6WY doub 5 n n CAZ NBE 6WY sing 6 n n CBA CAK 6WY doub 7 n y CBA CBB 6WY sing 8 n y CAK CAG 6WY sing 9 n y NBE CBB 6WY sing 10 n n NBE CAR 6WY sing 11 n n CBB CAL 6WY doub 12 n y CAR CAV 6WY sing 13 n n CAG CAH 6WY doub 14 n y CAL CAH 6WY sing 15 n y CAM CAV 6WY sing 16 n y CAM CAX 6WY doub 17 n y CAV CAI 6WY doub 18 n y O C 6WY doub 19 n n C CA 6WY sing 20 n n C NBC 6WY sing 21 n n CAP N 6WY sing 22 n n CAP CAO 6WY sing 23 n n CA N 6WY sing 24 n n N CAU 6WY sing 25 n n CAU CAX 6WY sing 26 n n CAU OAC 6WY doub 27 n n CAX CAW 6WY sing 28 n y CAN NBC 6WY sing 29 n n CAN CAA 6WY sing 30 n n CAI CAJ 6WY sing 31 n y NBC CAO 6WY sing 32 n n CAW CAJ 6WY doub 33 n y CAW FAF 6WY sing 34 n n NAS H1 6WY sing 35 n n CAK H2 6WY sing 36 n n CAG H3 6WY sing 37 n n CAH H4 6WY sing 38 n n CAL H5 6WY sing 39 n n CAR H6 6WY sing 40 n n CAR H7 6WY sing 41 n n CAM H8 6WY sing 42 n n CAI H9 6WY sing 43 n n CAJ H10 6WY sing 44 n n CAP H11 6WY sing 45 n n CAP H12 6WY sing 46 n n CAO H13 6WY sing 47 n n CAO H14 6WY sing 48 n n CA H15 6WY sing 49 n n CA H16 6WY sing 50 n n CAN H17 6WY sing 51 n n CAN H18 6WY sing 52 n n CAA H19 6WY sing 53 n n CAA H20 6WY sing 54 n n CAA H21 6WY sing 55 n n # _atom_sites.entry_id 5KPO _atom_sites.fract_transf_matrix[1][1] 0.020687 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010827 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6WY A 1 1101 1 6WY DRG . D 2 6WY B 1 1101 1 6WY DRG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAE 6WY . . . C 2 -11.96 -4.845 5.428 1 22.7 ? OAE 6WY 1101 A 1 HETATM 2 C CAZ 6WY . . . C 2 -10.943 -4.213 5.722 1 22.87 ? CAZ 6WY 1101 A 1 HETATM 3 N NAS 6WY . . . C 2 -10.624 -3.117 4.921 1 22.93 ? NAS 6WY 1101 A 1 HETATM 4 C CAY 6WY . . . C 2 -9.499 -2.352 5.177 1 22.84 ? CAY 6WY 1101 A 1 HETATM 5 O OAD 6WY . . . C 2 -9.265 -1.399 4.427 1 23.23 ? OAD 6WY 1101 A 1 HETATM 6 C CBA 6WY . . . C 2 -8.689 -2.7 6.264 1 22.31 ? CBA 6WY 1101 A 1 HETATM 7 C CAK 6WY . . . C 2 -7.543 -1.943 6.553 1 21.96 ? CAK 6WY 1101 A 1 HETATM 8 C CAG 6WY . . . C 2 -6.719 -2.276 7.627 1 21.69 ? CAG 6WY 1101 A 1 HETATM 9 C CAH 6WY . . . C 2 -7.044 -3.368 8.417 1 21.52 ? CAH 6WY 1101 A 1 HETATM 10 C CAL 6WY . . . C 2 -8.187 -4.124 8.147 1 21.91 ? CAL 6WY 1101 A 1 HETATM 11 C CBB 6WY . . . C 2 -9.038 -3.819 7.064 1 22.39 ? CBB 6WY 1101 A 1 HETATM 12 N NBE 6WY . . . C 2 -10.168 -4.554 6.784 1 23.01 ? NBE 6WY 1101 A 1 HETATM 13 C CAR 6WY . . . C 2 -10.595 -5.744 7.576 1 23.43 ? CAR 6WY 1101 A 1 HETATM 14 C CAV 6WY . . . C 2 -11.391 -5.396 8.715 1 23.72 ? CAV 6WY 1101 A 1 HETATM 15 C CAM 6WY . . . C 2 -12.388 -4.399 8.698 1 23.99 ? CAM 6WY 1101 A 1 HETATM 16 C CAI 6WY . . . C 2 -11.215 -6.114 9.907 1 23.91 ? CAI 6WY 1101 A 1 HETATM 17 C CAJ 6WY . . . C 2 -11.983 -5.831 11.035 1 24.16 ? CAJ 6WY 1101 A 1 HETATM 18 C CAW 6WY . . . C 2 -12.953 -4.836 11.003 1 24.71 ? CAW 6WY 1101 A 1 HETATM 19 F FAF 6WY . . . C 2 -13.677 -4.573 12.084 1 26.13 ? FAF 6WY 1101 A 1 HETATM 20 C CAX 6WY . . . C 2 -13.168 -4.12 9.829 1 24.77 ? CAX 6WY 1101 A 1 HETATM 21 C CAU 6WY . . . C 2 -14.121 -3.094 9.79 1 25.31 ? CAU 6WY 1101 A 1 HETATM 22 O OAC 6WY . . . C 2 -13.68 -1.943 9.845 1 24.25 ? OAC 6WY 1101 A 1 HETATM 23 N N 6WY . . . C 2 -15.459 -3.324 9.712 1 26.34 ? N 6WY 1101 A 1 HETATM 24 C CAP 6WY . . . C 2 -16.102 -4.666 9.666 1 27.32 ? CAP 6WY 1101 A 1 HETATM 25 C CAO 6WY . . . C 2 -17.285 -4.659 10.599 1 27.45 ? CAO 6WY 1101 A 1 HETATM 26 C CA 6WY . . . C 2 -16.325 -2.141 9.674 1 26.68 ? CA 6WY 1101 A 1 HETATM 27 C C 6WY . . . C 2 -17.702 -2.465 9.579 1 27.27 ? C 6WY 1101 A 1 HETATM 28 O O 6WY . . . C 2 -18.471 -1.616 9.111 1 27.42 ? O 6WY 1101 A 1 HETATM 29 N NBC 6WY . . . C 2 -18.223 -3.642 10.023 1 27.45 ? NBC 6WY 1101 A 1 HETATM 30 C CAN 6WY . . . C 2 -19.684 -3.839 9.877 1 27.24 ? CAN 6WY 1101 A 1 HETATM 31 C CAA 6WY . . . C 2 -20.229 -4.969 10.76 1 27.91 ? CAA 6WY 1101 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 31 #