data_5KPO
#
_model_server_result.job_id            6LrQBwqcFYVHogrFhmLwvA 
_model_server_result.datetime_utc      '2024-11-04 20:37:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kpo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1101}' 
#
_entry.id    5KPO 
#
_exptl.entry_id    5KPO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              424.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-[[3-(4-ethyl-3-oxidanylidene-piperazin-1-yl)carbonyl-4-fluoranyl-phenyl]methyl]quinazoline-2,4-dione 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5KPO 
_cell.length_a            48.34 
_cell.length_b            92.36 
_cell.length_c            163.44 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KPO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C 1 1 
B,D 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C22 H21 F N4 O4' 
_chem_comp.formula_weight    424.425 
_chem_comp.id                6WY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-[[3-(4-ethyl-3-oxidanylidene-piperazin-1-yl)carbonyl-4-fluoranyl-phenyl]methyl]quinazoline-2,4-dione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAD CAY 6WY doub 1 n n 
NAS CAY 6WY sing 2 n n 
NAS CAZ 6WY sing 3 n n 
CAY CBA 6WY sing 4 n n 
OAE CAZ 6WY doub 5 n n 
CAZ NBE 6WY sing 6 n n 
CBA CAK 6WY doub 7 n y 
CBA CBB 6WY sing 8 n y 
CAK CAG 6WY sing 9 n y 
NBE CBB 6WY sing 10 n n 
NBE CAR 6WY sing 11 n n 
CBB CAL 6WY doub 12 n y 
CAR CAV 6WY sing 13 n n 
CAG CAH 6WY doub 14 n y 
CAL CAH 6WY sing 15 n y 
CAM CAV 6WY sing 16 n y 
CAM CAX 6WY doub 17 n y 
CAV CAI 6WY doub 18 n y 
O C 6WY doub 19 n n 
C CA 6WY sing 20 n n 
C NBC 6WY sing 21 n n 
CAP N 6WY sing 22 n n 
CAP CAO 6WY sing 23 n n 
CA N 6WY sing 24 n n 
N CAU 6WY sing 25 n n 
CAU CAX 6WY sing 26 n n 
CAU OAC 6WY doub 27 n n 
CAX CAW 6WY sing 28 n y 
CAN NBC 6WY sing 29 n n 
CAN CAA 6WY sing 30 n n 
CAI CAJ 6WY sing 31 n y 
NBC CAO 6WY sing 32 n n 
CAW CAJ 6WY doub 33 n y 
CAW FAF 6WY sing 34 n n 
NAS H1 6WY sing 35 n n 
CAK H2 6WY sing 36 n n 
CAG H3 6WY sing 37 n n 
CAH H4 6WY sing 38 n n 
CAL H5 6WY sing 39 n n 
CAR H6 6WY sing 40 n n 
CAR H7 6WY sing 41 n n 
CAM H8 6WY sing 42 n n 
CAI H9 6WY sing 43 n n 
CAJ H10 6WY sing 44 n n 
CAP H11 6WY sing 45 n n 
CAP H12 6WY sing 46 n n 
CAO H13 6WY sing 47 n n 
CAO H14 6WY sing 48 n n 
CA H15 6WY sing 49 n n 
CA H16 6WY sing 50 n n 
CAN H17 6WY sing 51 n n 
CAN H18 6WY sing 52 n n 
CAA H19 6WY sing 53 n n 
CAA H20 6WY sing 54 n n 
CAA H21 6WY sing 55 n n 
#
_atom_sites.entry_id                     5KPO 
_atom_sites.fract_transf_matrix[1][1]    0.020687 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010827 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006118 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 6WY A 1 1101 1 6WY DRG . 
D 2 6WY B 1 1101 1 6WY DRG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAE 6WY . . . D 2 4.067 -20.234 36.013 1 30.12 ? OAE 6WY 1101 B 1 
HETATM 2 C CAZ 6WY . . . D 2 3.03 -19.618 36.258 1 31.09 ? CAZ 6WY 1101 B 1 
HETATM 3 N NAS 6WY . . . D 2 2.64 -19.575 37.598 1 31.53 ? NAS 6WY 1101 B 1 
HETATM 4 C CAY 6WY . . . D 2 1.483 -18.904 37.971 1 31.6 ? CAY 6WY 1101 B 1 
HETATM 5 O OAD 6WY . . . D 2 1.174 -18.896 39.165 1 31.91 ? OAD 6WY 1101 B 1 
HETATM 6 C CBA 6WY . . . D 2 0.728 -18.271 36.976 1 32.01 ? CBA 6WY 1101 B 1 
HETATM 7 C CAK 6WY . . . D 2 -0.444 -17.583 37.329 1 32.35 ? CAK 6WY 1101 B 1 
HETATM 8 C CAG 6WY . . . D 2 -1.205 -16.948 36.352 1 32.21 ? CAG 6WY 1101 B 1 
HETATM 9 C CAH 6WY . . . D 2 -0.793 -17.002 35.021 1 31.72 ? CAH 6WY 1101 B 1 
HETATM 10 C CAL 6WY . . . D 2 0.369 -17.681 34.66 1 31.37 ? CAL 6WY 1101 B 1 
HETATM 11 C CBB 6WY . . . D 2 1.155 -18.33 35.622 1 31.42 ? CBB 6WY 1101 B 1 
HETATM 12 N NBE 6WY . . . D 2 2.305 -18.993 35.282 1 31.24 ? NBE 6WY 1101 B 1 
HETATM 13 C CAR 6WY . . . D 2 2.818 -19.114 33.9 1 30.61 ? CAR 6WY 1101 B 1 
HETATM 14 C CAV 6WY . . . D 2 3.495 -17.979 33.409 1 30.53 ? CAV 6WY 1101 B 1 
HETATM 15 C CAM 6WY . . . D 2 4.505 -17.41 34.198 1 30.82 ? CAM 6WY 1101 B 1 
HETATM 16 C CAI 6WY . . . D 2 3.282 -17.456 32.136 1 30.27 ? CAI 6WY 1101 B 1 
HETATM 17 C CAJ 6WY . . . D 2 4.04 -16.361 31.703 1 30.66 ? CAJ 6WY 1101 B 1 
HETATM 18 C CAW 6WY . . . D 2 5.032 -15.792 32.514 1 31.38 ? CAW 6WY 1101 B 1 
HETATM 19 F FAF 6WY . . . D 2 5.733 -14.739 32.081 1 32.85 ? FAF 6WY 1101 B 1 
HETATM 20 C CAX 6WY . . . D 2 5.264 -16.323 33.781 1 31.32 ? CAX 6WY 1101 B 1 
HETATM 21 C CAU 6WY . . . D 2 6.217 -15.87 34.701 1 32.03 ? CAU 6WY 1101 B 1 
HETATM 22 O OAC 6WY . . . D 2 5.828 -15.115 35.588 1 32.07 ? OAC 6WY 1101 B 1 
HETATM 23 N N 6WY . . . D 2 7.484 -16.363 34.697 1 33.01 ? N 6WY 1101 B 1 
HETATM 24 C CAP 6WY . . . D 2 7.989 -17.332 33.689 1 33.19 ? CAP 6WY 1101 B 1 
HETATM 25 C CAO 6WY . . . D 2 9.168 -16.715 33 1 33.13 ? CAO 6WY 1101 B 1 
HETATM 26 C CA 6WY . . . D 2 8.419 -16.021 35.78 1 32.75 ? CA 6WY 1101 B 1 
HETATM 27 C C 6WY . . . D 2 9.754 -15.989 35.332 1 33 ? C 6WY 1101 B 1 
HETATM 28 O O 6WY . . . D 2 10.62 -15.684 36.161 1 32.15 ? O 6WY 1101 B 1 
HETATM 29 N NBC 6WY . . . D 2 10.134 -16.291 34.058 1 33.33 ? NBC 6WY 1101 B 1 
HETATM 30 C CAN 6WY . . . D 2 11.556 -16.219 33.661 1 33.85 ? CAN 6WY 1101 B 1 
HETATM 31 C CAA 6WY . . . D 2 12.244 -17.479 34.189 1 34.13 ? CAA 6WY 1101 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#